EWM29231.1, cds1451 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|585111752|gb|EWM29231.1| (serrate rna effector molecule [Nannochloropsis gaditana]) HSP 1 Score: 1133.63 bits (2931), Expect = 0.000e+0 Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0
Query: 1 MELEYHALVKRYAKSGAARSHLPLSAAAENAEESKVAEGVNGEGDAGHGTTESAGRSEEAAGAGIGLDAKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNMRSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDRERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPFKPSEKDEKSSGNVDESGVISSEWTKSMDGKVCKLVAAVQEGSRLKGLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLHGAVTAQEAQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRKKGAPSAPEVSGP 558
MELEYHALVKRYAKSGAARSHLPLSAAAENAEESKVAEGVNGEGDAGHGTTESAGRSEEAAGAGIGLDAKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNMRSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDRERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPFKPSEKDEKSSGNVDESGVISSEWTKSMDGKVCKLVAAVQEGSRLKGLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLHGAVTAQEAQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRKKGAPSAPEVSGP
Sbjct: 1 MELEYHALVKRYAKSGAARSHLPLSAAAENAEESKVAEGVNGEGDAGHGTTESAGRSEEAAGAGIGLDAKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNMRSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDRERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPFKPSEKDEKSSGNVDESGVISSEWTKSMDGKVCKLVAAVQEGSRLKGLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLHGAVTAQEAQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRKKGAPSAPEVSGP 558
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|553185481|ref|XP_005854254.1| (c2h2 zinc-finger protein [Nannochloropsis gaditana CCMP526] >gi|422294805|gb|EKU22105.1| c2h2 zinc-finger protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 504.212 bits (1297), Expect = 1.204e-166 Identity = 252/266 (94.74%), Postives = 253/266 (95.11%), Query Frame = 0
Query: 271 SAPQLYKRVEPFKPSEKDEKSSGNVDESGVISSEWTKSMDGKVCKLVAAVQEGSRLKGLDEEAQTQRDAEEK-----------AKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLHGAVTAQEAQPPRVSKNYKDIDVPKS 525
+ PQLYKRVEPFKPSEKDEKSSGNVDESGVISSEWTKSMDGKVCKLVAAVQEGSRLKGLDEEAQTQRDAEEK AKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLHGAVTAQEA PPRVSKNYKDIDVPKS
Sbjct: 525 TQPQLYKRVEPFKPSEKDEKSSGNVDESGVISSEWTKSMDGKVCKLVAAVQEGSRLKGLDEEAQTQRDAEEKSVFLPLAPMLQAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLHGAVTAQEAPPPRVSKNYKDIDVPKS 790 HSP 2 Score: 408.297 bits (1048), Expect = 1.767e-129 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
Query: 1 MELEYHALVKRYAKSGAARSHLPLSAAAENAEESKVAEGVNGEGDAGHGTTESAGRSEEAAGAGIGLDAKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNMRSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQ 200
MELEYHALVKRYAKSGAARSHLPL AAAENAEESKVAEGVNGEGDAGHGTTESAGRSEEAAGAGIGLDAKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNMRSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQ
Sbjct: 327 MELEYHALVKRYAKSGAARSHLPLGAAAENAEESKVAEGVNGEGDAGHGTTESAGRSEEAAGAGIGLDAKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNMRSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQ 526
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|325183133|emb|CCA17591.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 158.303 bits (399), Expect = 7.077e-38 Identity = 137/488 (28.07%), Postives = 221/488 (45.29%), Query Frame = 0
Query: 79 TLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNM-RSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDR-----ERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPFKPSEKDEKSSGNVDESGVISSE------WTKSMDGKVC--------KLVAAVQEGSRLKGLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLHGAVTAQEAQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRK 546
LY+R P L +R+ GG F+ LSDP K + + RSA+++Y T A A +HNT E D F PF LQ+S H + + P LS P LE D QA LA+ALD+ E L G+EA+L +V +LDV++AYLRRVH ++Y G + D GD++ + P L+ R EP + ++K+ ++ +S + W +D KV L+A+ +E +L L +E +T +A + AE ++G+ RC CTKLFK+ +F++KH+ KH V + + V + + D +PLPPV+ +N L + P+ ++ + G + + R++ E + RRA GG R G + PR + P +++ Y+D+D + T + + + + PPPK++ K
Sbjct: 197 ILYIRRVPCACPVGCLSDTIRKAGGAFLHLYLSDPVKKSAFDFDRSAYIIYETAAAAAEALPKVHNTFVEDG--------------DLFAPFRLQISQHRSRSPLKTPSYLSAPNRLEFDYEQALGLAKALDQSVFLNEADLAEHGIEALLRVESVMEAYAVNKQ--KLDVIIAYLRRVHHYIYYAGIQCLDMGDIMHAHPALFCRPEPSERDLAEDKARTEPVQAEDVSDQSKNVGGWAAGLDEKVQAYMKQLVPDLIASNREKQKL--LVDEIETHEEAALENTYANYAEKAG--EDGKHRCRL--CTKLFKAIDFVKKHIRNKHPELVVDKIADVGENYMWEQYREDPNRPLPPVET---TNNL-SRPILGNRAQRSRPEGPNFNGNRKMDEPYNYRRAPYPPRSGGRSHSRAPGMHSPRR-------------------PTSDLPVDPRQITTLYRDLDNLQDTKVELSFDALDSLPPPKKKTK 639
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|635372287|emb|CCI39508.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 156.377 bits (394), Expect = 2.782e-37 Identity = 139/502 (27.69%), Postives = 226/502 (45.02%), Query Frame = 0
Query: 67 LDAKGLEGHADAT---LYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNM-RSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDRERGLDGE-----GLEAVL-SAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPFKPSEKDEKSSGNV-------DESGVISSEWTKSMDGKVCKLVAAVQEGSRLKGLDEEAQTQRDAEEKAKQKWLAENMSNE-----DEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLHGAVTAQEAQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRK 546
L KG + + + LY+R P L +R+ GG F+ LSDP K + + RSA+++Y T A A +HNT E D F PF LQ+S H + + P LS P LE D QA +LA+ALD+ L+ G+EA+L S P ++A + +LDV++AYLRRVH ++Y G + D GD++ + P L+ R EP + ++K+ + D+S + W +D KV + + E + ++ Q D EK ++ L +N ++G+ RC CTKLFK+ +F++KH+ KH V + + V + + D +PLPPV+ +N L + P+ + + G + + R++ E + RRA GGG R PG+ +T +Y+D+D + T + + + + PPPK++ K
Sbjct: 182 LSGKGFDNDMEDSSRILYIRRVPCACPVGCLSDTIRKAGGAFLHLYLSDPVKKSAFDFDRSAYIIYDTAAAAAEALPKVHNTFVEDG--------------DLFAPFRLQISQHRSRAPLKTPSYLSAPNRLEFDYEQALSLAKALDQAVFLNKNDIAEHGIEALLASEPVMEAYPSNKQ---KLDVIIAYLRRVHHYIYYAGIQCLDMGDIMHAHPALFCRPEPSERDLAEDKARTELVQAEEGSDQSKSVGG-WAAGLDEKVQAYMKQL-EPDTIASNRQKQQVLVDEIEKREEAALESTYANYAEKAGEDGKHRCRL--CTKLFKAIDFVKKHIRNKHPELVVDKIADVGENYMWEQYREDPNRPLPPVET---TNTL-SKPILGSRGQRSRPEGPNFNGNRKMDEPFNYRRAPYPTRGGGRSYSR---------TPGMNSPRRPPPDVPVDPRQITT----------SYRDLDNLQDTKVELSFDALDTLPPPKKKTK 639
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|1214695717|gb|OWZ09428.1| (hypothetical protein PHMEG_00017875 [Phytophthora megakarya]) HSP 1 Score: 156.377 bits (394), Expect = 4.399e-37 Identity = 155/550 (28.18%), Postives = 230/550 (41.82%), Query Frame = 0
Query: 69 AKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNM-RSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDRERGLDG-------EGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPF----------------------KPSEKDEKSSGNVD----ESGVISSE-------WTKSMDGKVC----KLVAAVQEGSRLK--GLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYG------------------PRSIPGVGVGGASETGPLGLHGAVTAQE-------AQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRK 546
A LE A LYVR P A L + +++ GGPFV LSDP K + + RSA+++Y A A +HNT E G Q F PF LQ+S H + + P LS P+ L D Q+ ALA ALD R G G+EA L++ V +LDVV+AYLRRVH ++Y G + D GD++ + P L+ R P P+E+++ +GN D ES + E W ++D KV +L V E R K + +E +T+ +A ++ E S D+G+ RC CTKLFK+ +F++KH+ KH V + + V + + + D+++P+PP++ +P G +L A G R GGG G YR G+ G PRS P GG P +VS +Y+D+D + T + + + + PPPK++ K
Sbjct: 178 ANDLENSA-RVLYVRRVPCACPVATLSETIKKAGGPFVHLYLSDPVKKSAFDFDRSAYIIYENAAAATDAMPKIHNTFVED--------GNQ------FPPFRLQVSPHRARAPLKTPSYLSVPERLTADFQQSLALANALD-ARSFHGGGDKLARFGIEATLASEEVAQNYSTDKQ--KLDVVVAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPPPSARDIEEEKARQDAANAAKPEDDTPTEENKDDAGNTDAADKESANTTGETAKAIGGWAAALDEKVQTYLKELAPEVVENKRAKDRAVVDEIETREEAALESTYANYGEKAS--DDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELVVDKIAEVGESYMWEQYREDEQRPMPPLETSNN------MPGGAVLGGRAGSNGGRNGGGGYRGRPD-----RDFNGGGGRGFYRDDGYRGRGPPMRDDRMRRGSFDRPPRSPPRYNGGGGGYGRSPSRGPPSGPPRVPDGDLPVDPRQVSTSYRDLDNLQDTKVELSFDALDSLPPPKKKTK 694
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|566019976|gb|ETI42887.1| (hypothetical protein, variant [Phytophthora parasitica P1569]) HSP 1 Score: 150.599 bits (379), Expect = 5.020e-35 Identity = 158/546 (28.94%), Postives = 235/546 (43.04%), Query Frame = 0
Query: 69 AKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNM-RSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDR------ERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPF---------------KPS-----------------EKDEKSSGNVDESGVISSEWTKSMDGKVC----KLVAAVQEGSRLK--GLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYG------------------PRSIPGVGVGG---ASETGPLGLHGAVTAQE--AQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRK 546
A LE A LYVR P L + +++ GGPFV LSDP K + + RSA+++Y + + A A +HNT E G Q F PF LQ+S H + + P LS P+ L D Q+ ALA+ALD E L G+EA+L++ V +LDVV+AYLRRVH ++Y G + D GD++ + P L+ R P KP EK+ +SG E+ W ++D KV +L V E R K L +E + + +A ++ E S D+G+ RC CTKLFK+ +F++KH+ KH V + + V + + + D++ P+PP++ SN ++P G +L A + R R GG G YR G+ G PRS P GG + GP V E P +VS +Y+D+D + T + + + + PPPK++ K
Sbjct: 182 ANDLENSA-RVLYVRRVPCACPVGTLSEAIKKAGGPFVHLYLSDPVKKSAFDFDRSAYIIYESADAASDAMPKIHNTFVED--------GTQ------FPPFRLQVSPHRARAPLKTPSYLSVPERLTADFKQSLALAKALDARLFHGAEEKLARFGIEALLASEEVTQNYSSDKQ--KLDVVVAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPPPSARDIEEEKARQEAAAKPEDEALTTENKDDAANTEGEKEPTASGPSGETAKAIGGWAAALDEKVQAYLKELAPEVVETKRAKERALVDEIEAREEAALESTYSNYGEKAS--DDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELVVDKIAEVGESYMWEQYREDEQHPMPPLET---SN---SMPGGAVLGGRAGGSNGGRN--------GGGYRGRPERDFGGRGFYRDDGYRGRGPPMRDDRVRRSSFDRPPRSPPRYNGGGYGRSPSRGPPSGPPRVPDSELPVDPRQVSTSYRDLDNLQDTKVELSFDALDSLPPPKKKTK 692
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|570979927|gb|ETP40757.1| (hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 150.599 bits (379), Expect = 5.262e-35 Identity = 158/546 (28.94%), Postives = 235/546 (43.04%), Query Frame = 0
Query: 69 AKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNM-RSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDR------ERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPF---------------KPS-----------------EKDEKSSGNVDESGVISSEWTKSMDGKVC----KLVAAVQEGSRLK--GLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYG------------------PRSIPGVGVGG---ASETGPLGLHGAVTAQE--AQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRK 546
A LE A LYVR P L + +++ GGPFV LSDP K + + RSA+++Y + + A A +HNT E G Q F PF LQ+S H + + P LS P+ L D Q+ ALA+ALD E L G+EA+L++ V +LDVV+AYLRRVH ++Y G + D GD++ + P L+ R P KP EK+ +SG E+ W ++D KV +L V E R K L +E + + +A ++ E S D+G+ RC CTKLFK+ +F++KH+ KH V + + V + + + D++ P+PP++ SN ++P G +L A + R R GG G YR G+ G PRS P GG + GP V E P +VS +Y+D+D + T + + + + PPPK++ K
Sbjct: 182 ANDLENSA-RVLYVRRVPCACPVGTLSEAIKKAGGPFVHLYLSDPVKKSAFDFDRSAYIIYESADAASDAMPKIHNTFVED--------GTQ------FPPFRLQVSPHRARAPLKTPSYLSVPERLTADFKQSLALAKALDARLFHGAEEKLARFGIEALLASEEVTQNYSSDKQ--KLDVVVAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPPPSARDIEEEKARQEAAAKPEDEALTTENKDDAANTEGEKEPTASGPSGETAKAIGGWAAALDEKVQAYLKELAPEVVETKRAKERALVDEIEAREEAALESTYSNYGEKAS--DDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELVVDKIAEVGESYMWEQYREDEQHPMPPLET---SN---SMPGGAVLGGRAGGSNGGRN--------GGGYRGRPERDFGGRGFYRDDGYRGRGPPMRDDRVRRSSFDRPPRSPPRYNGGGYGRSPSRGPPSGPPRVPDSELPVDPRQVSTSYRDLDNLQDTKVELSFDALDSLPPPKKKTK 692
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|675198875|ref|XP_008908322.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|567957320|gb|ETK82923.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567985970|gb|ETL36302.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568015357|gb|ETL89534.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568045659|gb|ETM42799.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568091532|gb|ETN06353.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|570323572|gb|ETO71520.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570947405|gb|ETP12662.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 150.214 bits (378), Expect = 5.414e-35 Identity = 158/546 (28.94%), Postives = 235/546 (43.04%), Query Frame = 0
Query: 69 AKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNM-RSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDR------ERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEPF---------------KPS-----------------EKDEKSSGNVDESGVISSEWTKSMDGKVC----KLVAAVQEGSRLK--GLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYG------------------PRSIPGVGVGG---ASETGPLGLHGAVTAQE--AQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRK 546
A LE A LYVR P L + +++ GGPFV LSDP K + + RSA+++Y + + A A +HNT E G Q F PF LQ+S H + + P LS P+ L D Q+ ALA+ALD E L G+EA+L++ V +LDVV+AYLRRVH ++Y G + D GD++ + P L+ R P KP EK+ +SG E+ W ++D KV +L V E R K L +E + + +A ++ E S D+G+ RC CTKLFK+ +F++KH+ KH V + + V + + + D++ P+PP++ SN ++P G +L A + R R GG G YR G+ G PRS P GG + GP V E P +VS +Y+D+D + T + + + + PPPK++ K
Sbjct: 182 ANDLENSA-RVLYVRRVPCACPVGTLSEAIKKAGGPFVHLYLSDPVKKSAFDFDRSAYIIYESADAASDAMPKIHNTFVED--------GTQ------FPPFRLQVSPHRARAPLKTPSYLSVPERLTADFKQSLALAKALDARLFHGAEEKLARFGIEALLASEEVTQNYSSDKQ--KLDVVVAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPPPSARDIEEEKARQEAAAKPEDEALTTENKDDAANTEGEKEPTASGPSGETAKAIGGWAAALDEKVQAYLKELAPEVVETKRAKERALVDEIEAREEAALESTYSNYGEKAS--DDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELVVDKIAEVGESYMWEQYREDEQHPMPPLET---SN---SMPGGAVLGGRAGGSNGGRN--------GGGYRGRPERDFGGRGFYRDDGYRGRGPPMRDDRVRRSSFDRPPRSPPRYNGGGYGRSPSRGPPSGPPRVPDSELPVDPRQVSTSYRDLDNLQDTKVELSFDALDSLPPPKKKTK 692
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|570979926|gb|ETP40756.1| (hypothetical protein F442_11968 [Phytophthora parasitica P10297]) HSP 1 Score: 150.214 bits (378), Expect = 5.902e-35 Identity = 166/591 (28.09%), Postives = 251/591 (42.47%), Query Frame = 0
Query: 32 EESKVAEGVNGEGDAGHGTTESAGRS--EEAAGAGIGLD------AKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNM-RSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDR------ERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEP---------------FKPS-----------------EKDEKSSGNVDESGVISSEWTKSMDGKVC----KLVAAVQEGSRLK--GLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYG------------------PRSIPGVGVGG---ASETGPLGLHGAVTAQE--AQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRK 546
E+ K+ + +N G A + +E A G++ A LE A LYVR P L + +++ GGPFV LSDP K + + RSA+++Y + + A A +HNT E G Q F PF LQ+S H + + P LS P+ L D Q+ ALA+ALD E L G+EA+L++ V +LDVV+AYLRRVH ++Y G + D GD++ + P L+ R P KP EK+ +SG E+ W ++D KV +L V E R K L +E + + +A ++ E S D+G+ RC CTKLFK+ +F++KH+ KH V + + V + + + D++ P+PP++ SN ++P G +L A + R R GG G YR G+ G PRS P GG + GP V E P +VS +Y+D+D + T + + + + PPPK++ K
Sbjct: 142 EKQKITQQINEAKQFGERVRSGAAKICLDEQPPAENGVNPLGEDFANDLENSA-RVLYVRRVPCACPVGTLSEAIKKAGGPFVHLYLSDPVKKSAFDFDRSAYIIYESADAASDAMPKIHNTFVED--------GTQ------FPPFRLQVSPHRARAPLKTPSYLSVPERLTADFKQSLALAKALDARLFHGAEEKLARFGIEALLASEEVTQNYSSDKQ--KLDVVVAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPPPSARDIEEEKARQEAAAKPEDEALTTENKDDAANTEGEKEPTASGPSGETAKAIGGWAAALDEKVQAYLKELAPEVVETKRAKERALVDEIEAREEAALESTYSNYGEKAS--DDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELVVDKIAEVGESYMWEQYREDEQHPMPPLET---SN---SMPGGAVLGGRAGGSNGGRN--------GGGYRGRPERDFGGRGFYRDDGYRGRGPPMRDDRVRRSSFDRPPRSPPRYNGGGYGRSPSRGPPSGPPRVPDSELPVDPRQVSTSYRDLDNLQDTKVELSFDALDSLPPPKKKTK 697
BLAST of EWM29231.1 vs. NCBI_GenBank
Match: gi|566019975|gb|ETI42886.1| (hypothetical protein F443_12057 [Phytophthora parasitica P1569]) HSP 1 Score: 150.214 bits (378), Expect = 6.425e-35 Identity = 158/546 (28.94%), Postives = 235/546 (43.04%), Query Frame = 0
Query: 69 AKGLEGHADATLYVRPFSSTVPRAPLEKLLRERGGPFVRFLLSDPAKSTYCNM-RSAWLVYATKEQADSARQTLHNTEAEHPLEEQVRAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQAFALAQALDR------ERGLDGEGLEAVLSAPAVKAELERRNMSFRLDVVMAYLRRVHFLVFYGGDEFKDEGDLLFSAPQLYKRVEP---------------FKPS-----------------EKDEKSSGNVDESGVISSEWTKSMDGKVC----KLVAAVQEGSRLK--GLDEEAQTQRDAEEKAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRMVRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEESSRRRARASGAGGGAGAYRGRGHYG------------------PRSIPGVGVGG---ASETGPLGLHGAVTAQE--AQPPRVSKNYKDIDVPKSTLLTVDYGDVAIPPPPKRRRK 546
A LE A LYVR P L + +++ GGPFV LSDP K + + RSA+++Y + + A A +HNT E G Q F PF LQ+S H + + P LS P+ L D Q+ ALA+ALD E L G+EA+L++ V +LDVV+AYLRRVH ++Y G + D GD++ + P L+ R P KP EK+ +SG E+ W ++D KV +L V E R K L +E + + +A ++ E S D+G+ RC CTKLFK+ +F++KH+ KH V + + V + + + D++ P+PP++ SN ++P G +L A + R R GG G YR G+ G PRS P GG + GP V E P +VS +Y+D+D + T + + + + PPPK++ K
Sbjct: 187 ANDLENSA-RVLYVRRVPCACPVGTLSEAIKKAGGPFVHLYLSDPVKKSAFDFDRSAYIIYESADAASDAMPKIHNTFVED--------GTQ------FPPFRLQVSPHRARAPLKTPSYLSVPERLTADFKQSLALAKALDARLFHGAEEKLARFGIEALLASEEVTQNYSSDKQ--KLDVVVAYLRRVHHYIYYAGVQCLDMGDIMHAHPALFCRPPPSARDIEEEKARQEAAAKPEDEALTTENKDDAANTEGEKEPTASGPSGETAKAIGGWAAALDEKVQAYLKELAPEVVETKRAKERALVDEIEAREEAALESTYSNYGEKAS--DDGKHRCRL--CTKLFKAMDFVKKHIRNKHPELVVDKIAEVGESYMWEQYREDEQHPMPPLET---SN---SMPGGAVLGGRAGGSNGGRN--------GGGYRGRPERDFGGRGFYRDDGYRGRGPPMRDDRVRRSSFDRPPRSPPRYNGGGYGRSPSRGPPSGPPRVPDSELPVDPRQVSTSYRDLDNLQDTKVELSFDALDSLPPPKKKTK 697 The following BLAST results are available for this feature:
BLAST of EWM29231.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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