EWM29239.1, cds1440 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|585111761|gb|EWM29239.1| (glucokinase [Nannochloropsis gaditana]) HSP 1 Score: 655.21 bits (1689), Expect = 0.000e+0 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
Query: 1 MTNRGRWIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLEHLNHGNVLRGVFKGAATGSASRAHDGISFWRSQTAVTLVGGVALASLSFLAAKFFRK 322
MTNRGRWIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLEHLNHGNVLRGVFKGAATGSASRAHDGISFWRSQTAVTLVGGVALASLSFLAAKFFRK
Sbjct: 1 MTNRGRWIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLEHLNHGNVLRGVFKGAATGSASRAHDGISFWRSQTAVTLVGGVALASLSFLAAKFFRK 322
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|953498019|emb|CEG40779.1| (glucokinase [Plasmopara halstedii]) HSP 1 Score: 270.011 bits (689), Expect = 1.000e-84 Identity = 138/262 (52.67%), Postives = 173/262 (66.03%), Query Frame = 0
Query: 7 WIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLEHLN 268
W I+G L KE+G+ V LINDF A GYGLLT+ E VL DA E G PIATIGAGTGLGEC+LT G DG+Y + EGGH +F P E E +L +K+ R SVER+VSGPG+A +Y FLA YPD+VD +V F AG + GKIV +NAK L A++I AYG EAG A LK++P GG +ITGGL PKN+D ++ +F++A +KGR+SP + IP+Y VL EDLGERGAH+ A + LLE N
Sbjct: 96 WKIDGASLEKELGIATVKLINDFAAMGYGLLTLK---PHEYIVLNDAKKEEGMPIATIGAGTGLGECYLTAGSDGHYSCFACEGGHTDFAPADEIEIELYNSIKKDLGCDRRFSVERIVSGPGLATIYKFLANKYPDKVDTNVHEEFLQAGSLQGKIVGDNAKSNELCNQAMEILVDAYGREAGCAMLKYLPRGGFYITGGLAPKNLDYFTKKD-IFLKACFNKGRISPAIKAIPIYLVLTEDLGERGAHFYAYQ-LLESYN 352
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|970639779|gb|KUF82625.1| (Glucokinase [Phytophthora nicotianae]) HSP 1 Score: 267.7 bits (683), Expect = 1.503e-84 Identity = 136/259 (52.51%), Postives = 172/259 (66.41%), Query Frame = 0
Query: 7 WIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLE 265
W I+G L KE+G+K+V LINDF A GYGLLT+ E VL DA + AP+ATIGAGTGLGECFLTPG DG Y + EGGH +F P E E +L +K + R SVER+VSGPG+A +Y+FLA+ +P++VD V F A GK++ ENAK L L+IF GAYG EAG A LK++P GG +ITGGL PKN+D ++ +F+++ DKGRVSP L P+Y VL EDLGERGAH+ A + L E
Sbjct: 96 WKIDGPGLEKELGIKKVRLINDFAAMGYGLLTLR---PHEYIVLNDAPKDETAPMATIGAGTGLGECFLTPGMDGQYSCFACEGGHTDFAPADEIEIELYNEIKTKLGCSQRFSVERIVSGPGLATIYEFLAKKFPEKVDPKVHEQFLTANTQQGKVIGENAKTNELCNQTLEIFVGAYGREAGNAMLKYLPRGGFYITGGLAPKNLDYFTKKD-IFLKSLFDKGRVSPALKACPIYLVLNEDLGERGAHYYAYQLLTE 350
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|675213243|ref|XP_008915506.1| (glucokinase [Phytophthora parasitica INRA-310] >gi|566007744|gb|ETI30655.1| glucokinase [Phytophthora parasitica P1569] >gi|567945244|gb|ETK71055.1| glucokinase [Phytophthora parasitica] >gi|567973846|gb|ETL24499.1| glucokinase [Phytophthora parasitica] >gi|568003371|gb|ETL77721.1| glucokinase [Phytophthora parasitica] >gi|568033268|gb|ETM30985.1| glucokinase [Phytophthora parasitica] >gi|568084252|gb|ETM99188.1| glucokinase [Phytophthora parasitica INRA-310] >gi|570311456|gb|ETO59404.1| glucokinase [Phytophthora parasitica P1976] >gi|570935190|gb|ETP00447.1| glucokinase [Phytophthora parasitica CJ01A1] >gi|570965483|gb|ETP28602.1| glucokinase [Phytophthora parasitica P10297]) HSP 1 Score: 269.24 bits (687), Expect = 2.043e-84 Identity = 140/270 (51.85%), Postives = 177/270 (65.56%), Query Frame = 0
Query: 7 WIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLEHLNH--GNVLR 274
W I+G L KE+G+ V LINDF A GYGLLT+ E VL +A E G PIATIGAGTGLGEC+LT +DG Y + EGGH +F P E E +L +K R SVER+VSGPG+AN+Y FLA+ +PD+VDK V AF A + GKIV +NAK L A++IF AYG EAG A LK++P GG +ITGGL PKN+D + +F++A +KGRVSP L IP+Y VL EDLGERGAH+ A + L + N GN+++
Sbjct: 96 WKIDGPGLEKELGITTVKLINDFAAMGYGLLTLK---PHEYIVLNEAEKEEGMPIATIGAGTGLGECYLTADKDGNYSCFACEGGHTDFAPADEIEIELYNSIKEELGCNRRFSVERIVSGPGLANIYRFLAKKFPDKVDKKVHEAFVRAKALQGKIVGDNAKTNELCNQAMEIFVDAYGREAGCAMLKYLPRGGFYITGGLAPKNLDYFT-QKDIFLKACFNKGRVSPALKAIPIYLVLTEDLGERGAHYYAYQLLQTYNNSLLGNIIQ 361
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|970649495|gb|KUF88748.1| (Glucokinase [Phytophthora nicotianae] >gi|970653557|gb|KUF92015.1| E3 ubiquitin-protein ligase [Phytophthora nicotianae]) HSP 1 Score: 266.929 bits (681), Expect = 3.218e-84 Identity = 136/259 (52.51%), Postives = 172/259 (66.41%), Query Frame = 0
Query: 7 WIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLE 265
W I+G L KE+G+K+V LINDF A GYGLLT+ E VL DA + AP+ATIGAGTGLGECFLTPG DG Y + EGGH +F P E E +L +K + R SVER+VSGPG+A +Y+FLA+ +P++VD V F A GK++ ENAK L L+IF GAYG EAG A LK++P GG +ITGGL PKN+D ++ +F+++ DKGRVSP L P+Y VL EDLGERGAH+ A + L E
Sbjct: 96 WKIDGPGLEKELGIKKVRLINDFAAMGYGLLTLR---PHEYIVLNDAPKDETAPMATIGAGTGLGECFLTPGMDGQYSCFACEGGHTDFAPADEIEIELYNEIKTKLGCSQRFSVERIVSGPGLATIYEFLAKKFPEKVDPKVHEQFLTANTQQGKVIGENAKTNELCNQTLEIFVGAYGREAGNAMLKYLPRGGFYITGGLAPKNLDYFTKKD-IFLKSLFDKGRVSPALKACPIYLVLNEDLGERGAHYYAYQLLKE 350
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|570935208|gb|ETP00465.1| (glucokinase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 267.314 bits (682), Expect = 5.470e-84 Identity = 135/259 (52.12%), Postives = 172/259 (66.41%), Query Frame = 0
Query: 7 WIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLE 265
W I+G L KE+G+K+V LINDF A GYGLLT+ E VL DA + AP+ATIGAGTGLGECFLTPG DG Y + EGGH +F P E E +L +K + R SVER+VSGPG+A +Y+FLA+ +P++VD V F A GK++ ENAK L L+IF GAYG EAG A LK++P GG +ITGGL PKN+D ++ +F+++ DKGRVSP + P+Y VL EDLGERGAH+ A + L E
Sbjct: 126 WKIDGPGLEKELGIKKVRLINDFAAMGYGLLTLR---PHEYIVLNDAPKDETAPMATIGAGTGLGECFLTPGNDGQYSCFACEGGHTDFAPADEIEIELYNEIKTKLGCSQRFSVERIVSGPGLATIYEFLAKKFPEKVDPKVHEQFLTANTQQGKVIGENAKTNELCNQTLEIFVGAYGREAGNAMLKYLPRGGFYITGGLAPKNLDYFTKKD-IFLKSVFDKGRVSPAIKACPIYLVLNEDLGERGAHYYAYQLLTE 380
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|970652584|gb|KUF91218.1| (Cyclic nucleotide-gated channel cone photoreceptor subunit alpha [Phytophthora nicotianae]) HSP 1 Score: 266.159 bits (679), Expect = 6.938e-84 Identity = 135/259 (52.12%), Postives = 172/259 (66.41%), Query Frame = 0
Query: 7 WIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLE 265
W I+G L KE+G+K+V LINDF A GYGLLT+ E VL DA + AP+ATIGAGTGLGECFLTPG DG Y + EGGH +F P E E +L +K + R SVER+VSGPG+A +Y+FLA+ +P++VD V F A GK++ ENAK L L+IF GAYG EAG A LK++P GG +ITGGL PKN+D ++ +F+++ DKGRVSP + P+Y VL EDLGERGAH+ A + L E
Sbjct: 96 WKIDGPGLEKELGIKKVRLINDFAAMGYGLLTLR---PHEYIVLNDAPKDETAPMATIGAGTGLGECFLTPGMDGQYSCFACEGGHTDFAPADEIEIELYNEIKTKLGCSQRFSVERIVSGPGLATIYEFLAKKFPEKVDPKVHEQFLTANTQQGKVIGENAKTNELCNQTLEIFVGAYGREAGNAMLKYLPRGGFYITGGLAPKNLDYFTKKD-IFLKSVFDKGRVSPAIKACPIYLVLNEDLGERGAHYYAYQLLTE 350
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|570311479|gb|ETO59427.1| (glucokinase [Phytophthora parasitica P1976]) HSP 1 Score: 266.929 bits (681), Expect = 8.255e-84 Identity = 135/259 (52.12%), Postives = 172/259 (66.41%), Query Frame = 0
Query: 7 WIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLE 265
W I+G L KE+G+K+V LINDF A GYGLLT+ E VL DA + AP+ATIGAGTGLGECFLTPG DG Y + EGGH +F P E E +L +K + R SVER+VSGPG+A +Y+FLA+ +P++VD V F A GK++ ENAK L L+IF GAYG EAG A LK++P GG +ITGGL PKN+D ++ +F+++ DKGRVSP + P+Y VL EDLGERGAH+ A + L E
Sbjct: 126 WKIDGPGLEKELGIKKVRLINDFAAMGYGLLTLR---PHEYIVLNDAPKDETAPMATIGAGTGLGECFLTPGMDGQYSCFACEGGHTDFAPADEIEIELYNEIKTKLGCSQRFSVERIVSGPGLATIYEFLAKKFPEKVDPKVHEQFLTANTQQGKVIGENAKTNELCNQTLEIFVGAYGREAGNAMLKYLPRGGFYITGGLAPKNLDYFTKKD-IFLKSLFDKGRVSPAIKACPIYLVLNEDLGERGAHYYAYQLLTE 380
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|301112913|ref|XP_002998227.1| (glucokinase, putative [Phytophthora infestans T30-4] >gi|262112521|gb|EEY70573.1| glucokinase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 265.388 bits (677), Expect = 8.629e-84 Identity = 139/270 (51.48%), Postives = 175/270 (64.81%), Query Frame = 0
Query: 7 WIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTLLEHLNH--GNVLR 274
W I+G L KE+G+ V LINDF A GYGLLT+ E VL +A E G PIATIGAGTGLGEC+LT + G Y Y EGGH +F P E E +L +K R SVER+VSGPG+A +Y FLA+ +PD+VDK V AF A + GKIV +NAK L A++IF AYG EAG A LK++P GG +ITGGL PKN+D + +F++A +KGRVSP L IP+Y VL EDLGERGAH+ A + L + N GN+++
Sbjct: 36 WKIDGPGLEKELGITTVKLINDFAAMGYGLLTLK---PHEYIVLNEAEKEEGMPIATIGAGTGLGECYLTADKHGEYSCYACEGGHTDFAPADEIEIELYNSIKEELGCSRRFSVERIVSGPGLATIYKFLAKKFPDKVDKKVHDAFVRAKSLQGKIVGDNAKTNELCNQAMEIFVDAYGREAGCAMLKYLPRGGFYITGGLAPKNLDYFT-QRDIFLKACFNKGRVSPALKAIPIYLVLTEDLGERGAHYYAYQLLQTYNNSLLGNIVQ 301
BLAST of EWM29239.1 vs. NCBI_GenBank
Match: gi|301112915|ref|XP_002998228.1| (glucokinase, putative [Phytophthora infestans T30-4] >gi|262112522|gb|EEY70574.1| glucokinase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 265.774 bits (678), Expect = 1.034e-83 Identity = 134/257 (52.14%), Postives = 171/257 (66.54%), Query Frame = 0
Query: 7 WIINGDRLAKEVGLKRVVLINDFVAQGYGLLTVDRTDTKEVHVLQDASPEPGAPIATIGAGTGLGECFLTPGEDGYYVAYPSEGGHAEFPPRTETEFQLLEFLKRRYEQKHRVSVERVVSGPGIANVYDFLAEHYPDQVDKSVDAAFRAAGEMGGKIVSENAKPGTLAGLALDIFAGAYGSEAGVAGLKWMPFGGLFITGGLTPKNIDRIAGENSLFMEAFRDKGRVSPLLSKIPMYAVLVEDLGERGAHWMAIKTL 263
W I+G L KE+G+K+V LINDF A GYGLLT+ E VL DA + AP+ATIGAGTGLGECFLTPG DG Y + EGGH +F P E E +L +K + R SVER+VSGPG+A +Y+FLA+ +P++VD V F A GK++ ENAK L L+IF GAYG EAG A LK++P GG +ITGGL PKN+D ++ +F+++ DKGRVSP L P+Y VL E+LGERGAH+ A + L
Sbjct: 97 WKIDGASLEKELGIKQVQLINDFAAMGYGLLTLR---PHEYIVLNDAPKDETAPMATIGAGTGLGECFLTPGNDGQYSCFACEGGHTDFAPADEIEIELYNEIKAKLGCSQRFSVERIVSGPGLATIYEFLAKKFPEKVDPKVHEEFLKANTQQGKVIGENAKTNELCNQTLEIFVGAYGREAGNAMLKYLPRGGFYITGGLAPKNLDYFTKKD-IFLKSLFDKGRVSPALKACPIYLVLTEELGERGAHFYAYQLL 349 The following BLAST results are available for this feature:
BLAST of EWM29239.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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