EWM29240.1, cds1436 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|585111762|gb|EWM29240.1| (putative glycosyltransferase aer61 [Nannochloropsis gaditana]) HSP 1 Score: 1060.83 bits (2742), Expect = 0.000e+0 Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0
Query: 1 MKEDNEHAMLIESGHASPGPQKTTRTSSTCTQSSPCQAMIASRKARLVLMLCWVLTVTSAALSFLRGKQLPVRLLKESRVTCHGNSTETRQCVFRDVIVENGVIWLYKTHPDSGIPRVLCSQVNQPSSFARECEIRIVSDGRKYAHLLRKASKSLLLDVGVALSRLNPSNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEGDSLLDGEIWRQILPEVAMVHPLGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQIHLFATVASITVAVDAFKNHMKDALRLWRIKRKYAAATTPAEFMKLQAQIVETRTMARDPAPLCAR 513
MKEDNEHAMLIESGHASPGPQKTTRTSSTCTQSSPCQAMIASRKARLVLMLCWVLTVTSAALSFLRGKQLPVRLLKESRVTCHGNSTETRQCVFRDVIVENGVIWLYKTHPDSGIPRVLCSQVNQPSSFARECEIRIVSDGRKYAHLLRKASKSLLLDVGVALSRLNPSNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEGDSLLDGEIWRQILPEVAMVHPLGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQIHLFATVASITVAVDAFKNHMKDALRLWRIKRKYAAATTPAEFMKLQAQIVETRTMARDPAPLCAR
Sbjct: 1 MKEDNEHAMLIESGHASPGPQKTTRTSSTCTQSSPCQAMIASRKARLVLMLCWVLTVTSAALSFLRGKQLPVRLLKESRVTCHGNSTETRQCVFRDVIVENGVIWLYKTHPDSGIPRVLCSQVNQPSSFARECEIRIVSDGRKYAHLLRKASKSLLLDVGVALSRLNPSNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEGDSLLDGEIWRQILPEVAMVHPLGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQIHLFATVASITVAVDAFKNHMKDALRLWRIKRKYAAATTPAEFMKLQAQIVETRTMARDPAPLCAR 513
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|219120400|ref|XP_002180939.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407655|gb|EEC47591.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 402.905 bits (1034), Expect = 3.054e-132 Identity = 195/422 (46.21%), Postives = 276/422 (65.40%), Query Frame = 0
Query: 78 SRVTCHGNSTETRQCVFRDVIVENGVIWLYKTHP---DSGIPRVLCSQVNQPSSFARECEIRIVSDGRKYAHLLRKASKSLLLDVGVALSRLNPSNVYHAIFEDLIPTIA-MMRKVGNVSVDPTAMSDALRQRR----WGVFITDNE-GDSLLDGEIWRQILPEVAMVHPLGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQIHLFATVASITVAVDAFKNHMKDALRLWRIKRKYAAATTPAEF 490
S C G+S +TR+CVF +V+V++GV WL P + P +LCS N P + C++R +D + LL ++S GVAL RLNP N YH +FED+IP +A ++ + G +V + ++Q + WG+F+TD + ++ + W ++LPEV +VHP + V L+AG+ V C+HWG C+PT+RP GLF+PPDAA++FR VFHR+GI+E A + S PR+TLVQR++TRR++NL E+ +A+ A +G R+VDM+ LS+REQ+ L+HDTDIYVLVHGGALAN LWLP A+I+DIYP+GF IS S ++H IRKALEP +GH PFQV ++ GQ +L+GPL GCVC + ECQ H+F T A I + D F+ HM++AL +WR + Y +P EF
Sbjct: 47 SHFQCQGDSRDTRRCVFHNVVVQDGVFWLEAPDPRDPSAAPPSLLCSTTNGPEKHTKPCDVRFAADAFAWRTLLDATTESRRFATGVALYRLNPGNAYHVLFEDMIPIVANLLDRTGGTAVSYSPGHADVKQHQPRAPWGLFVTDRKITAKAMEDKFWNELLPEVTVVHPTTEVYHVDTLLAGSGVPCSHWGLCRPTNRPVGLFDPPDAAITFRHLVFHRYGIQE----EAPNAMSLPRQNPPRITLVQRTTTRRIRNLQEVQDAVKAGTGTVARLVDMAELSLREQISLSHDTDIYVLVHGGALANTLWLPPRALIIDIYPHGFMISGRSALLHSIRKALEPAFAVGHLPFQVENTPGQEILEGPLAPGCVCSAFECQSHVFHTSAWIHIDPDRFQTHMQEALHIWR-EANYTRPISPEEF 463
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|553178774|ref|XP_005852603.1| (hypothetical protein NGA_2058100, partial [Nannochloropsis gaditana CCMP526] >gi|422295930|gb|EKU23229.1| hypothetical protein NGA_2058100, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 252.292 bits (643), Expect = 9.902e-78 Identity = 119/226 (52.65%), Postives = 157/226 (69.47%), Query Frame = 0
Query: 224 EIWRQILPEVAMVHP-LGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQI 448
+ W++ LPE+ +V P + V+ L+AGT CAHWGHCQP +RP G+F+PPDAAL+ R VFHR+GI +E + PRVTLVQRS +R + NL E+V + G+SP+VVDM+ LS+ EQV LA++TDI++LVHGGAL ++LWLP A+I+DIYP+GF I HHSGIVHWIRK++EP +GH PF V +S GQ GPL +GCVC + CQ
Sbjct: 1 KFWKEFLPEIIIVPPSKNHIYHVQNLLAGTGTPCAHWGHCQPDNRPRGIFDPPDAALNLRSLVFHRYGI---LEREQLVTIRVPRKDPPRVTLVQRSKSRCIYNLQEVVSMIEVQMGSSPKVVDMAQLSIEEQVLLAYNTDIFILVHGGALTHILWLPTRALIIDIYPHGFSIDHHSGIVHWIRKSMEPAYHIGHLPFAVETSVGQSTTQGPLISGCVCHTAGCQF 223
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|1160125672|ref|XP_020388209.1| (EGF domain-specific O-linked N-acetylglucosamine transferase isoform X2 [Rhincodon typus]) HSP 1 Score: 70.0922 bits (170), Expect = 2.259e-10 Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 0
Query: 308 LGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY 389
+G RVTL+ RS+ RR+ N E+V+AL V+ RVVD ++ EQ+ + H++DI++ +HG L +LL+LP+ A++ ++Y
Sbjct: 22 IGKIRVTLLVRSTQYRRILNQDELVKALKTVTVFDVRVVDYKDIRFLEQLKITHNSDIFISIHGAGLTHLLFLPDWAVVFELY 104
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|1160125670|ref|XP_020388208.1| (EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1 [Rhincodon typus]) HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-9 Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 0
Query: 308 LGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY 389
+G RVTL+ RS+ RR+ N E+V+AL V+ RVVD ++ EQ+ + H++DI++ +HG L +LL+LP+ A++ ++Y
Sbjct: 115 IGKIRVTLLVRSTQYRRILNQDELVKALKTVTVFDVRVVDYKDIRFLEQLKITHNSDIFISIHGAGLTHLLFLPDWAVVFELY 197
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|556973116|ref|XP_005994637.1| (PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Latimeria chalumnae] >gi|556973119|ref|XP_005994638.1| PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Latimeria chalumnae] >gi|556973122|ref|XP_005994639.1| PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Latimeria chalumnae] >gi|942140972|ref|XP_014343045.1| PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Latimeria chalumnae]) HSP 1 Score: 71.2478 bits (173), Expect = 1.922e-9 Identity = 66/294 (22.45%), Postives = 120/294 (40.82%), Query Frame = 0
Query: 158 DVGVALSRLNPSNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEGDSLLDGEIWRQILPEVAMVHPLGRAH--RVRKLIAGTQ--------VSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLL-DGPLPAGCV 440
DV + L+R NP N+ H +DL+P M++ ++ ++ S + W NEG L +++R + + PL + H + KL+ T+ + +G QP + + + F FV R ++S G + + R+ R + N E++ AL V + + S + V + + V +HG L ++LP+GA IV+++PY H++ + A PG+GL + +Q E + D P G +
Sbjct: 157 DVALILNRFNPDNLMHIFHDDLLPIFYTMQQFPDLDLE----SRLVFMEGW------NEG---LHFDLYRLL----SNKQPLLKEHLNTLGKLLCYTKSYVGLSKMTTWYQYGFVQPQGPKANILVSGNEIRQFTNFVMERLN-----------ASSETGSKEEYIVVFSRTINRLILNEAELILALAQEFQIKTITVSLDDHSFTDIVQIISKASMLVSMHGAQLVTAIFLPQGATIVELFPYAVNPEHYTP---YKTLASLPGMGLQYIAWQNTKQENTITFPDRPWDLGGI 419
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|1009552510|ref|XP_015911737.1| (protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Parasteatoda tepidariorum] >gi|1009552512|ref|XP_015911738.1| protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Parasteatoda tepidariorum]) HSP 1 Score: 68.1662 bits (165), Expect = 1.088e-8 Identity = 61/236 (25.85%), Postives = 106/236 (44.92%), Query Frame = 0
Query: 169 SNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEG-----DSLLD-GEIWRQILPEVAMVHPLGRAHRV----RKLIAGTQVSC---AHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPY 391
SN +H ++ L+P + + S AL G+ T EG D+ D W Q+L L + HR+ R+L + C A++G P F+ P+ S+ FV FGI+ + + + P++ L+ R R++ N E+V++++AV A VVD S +SV+EQ+ ++ + ++G L N L+LP+ ++ V + PY
Sbjct: 122 SNYFHLHYDTLLPLFVALHQDSTKSSSGAIKDIALLP---GIETTRGEGIDWNTDAFNDLRSYWMQLLT------ALSKPHRLLPLDRRLAGINKTVCFEEAYFG------TPKIDFSSPELLQSYALFVKKAFGIK--------SPKTNVDSKKPKIGLIHREGRRKILNEAELVKSMSAV--AKVDVVDFSFMSVKEQIEKVQQYNVLIGMNGAGLVNALYLPKSSVAVQLVPY 332
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|734561503|gb|KHN87585.1| (EGF domain-specific O-linked N-acetylglucosamine transferase [Toxocara canis]) HSP 1 Score: 67.781 bits (164), Expect = 2.420e-8 Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 0
Query: 269 SGLFNPPDAALSFRRFVFHRFGI-EEGVEETAHASTSTIGLGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDM-SNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY-----PYGFYISHHSGIVH--WIRKALEPGLGLGHHP 419
SGLF+ +F +F+ HR + +EG L RVTL+ RS+ RR+ N E+ E L + G + VD S +S +Q+ + H+TDI++ +HG L +LL+LP+ A I +IY + ++ G+ + W +++ +G G HP
Sbjct: 340 SGLFH------AFSKFILHRLRVKQEGP-----------VLNSIRVTLLSRSTKFRRIVNEDELFEVLNGIPGVIAQRVDYNSQMSFLDQLSVTHNTDIFIGMHGSGLTHLLFLPDWAAIFEIYNCEDISCYYDLARLRGVKYFTWKKESEMEQIGEGRHP 483
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|998717022|ref|XP_015496358.1| (PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717024|ref|XP_015496359.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717026|ref|XP_015496360.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717028|ref|XP_015496361.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717030|ref|XP_015496362.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717032|ref|XP_015496363.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717036|ref|XP_015496365.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717038|ref|XP_015496366.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|1099020875|ref|XP_018863632.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major]) HSP 1 Score: 67.3958 bits (163), Expect = 2.471e-8 Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query: 269 SGLFNPPDAALSFRRFVFHRFGI-EEGVEETAHASTSTIGLGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDMS--NLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY 389
+GLF +F + V HR I +EG ++ G RVT++ RS+ RR+ N E+V AL VS RVVD L EQ+ + H++DI++ +HG L +LL+LP+ A++ ++Y
Sbjct: 339 TGLFR------AFSQHVLHRLNITQEGPKD-----------GKIRVTILARSTDYRRILNQNELVNALKTVSTLEVRVVDYKYKELEFSEQLRITHNSDIFIGIHGAGLTHLLFLPDWAVVFELY 446
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|543355377|ref|XP_005522061.1| (PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis] >gi|929437115|ref|XP_014107295.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis] >gi|929437123|ref|XP_014107296.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis] >gi|929437125|ref|XP_014107297.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis] >gi|929437131|ref|XP_014107298.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis]) HSP 1 Score: 67.3958 bits (163), Expect = 2.721e-8 Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query: 269 SGLFNPPDAALSFRRFVFHRFGI-EEGVEETAHASTSTIGLGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDMS--NLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY 389
+GLF +F + V HR I +EG ++ G RVT++ RS+ RR+ N E+V AL VS RVVD L EQ+ + H++DI++ +HG L +LL+LP+ A++ ++Y
Sbjct: 339 TGLFR------AFSQHVLHRLNITQEGPKD-----------GKIRVTILARSTDYRRILNQNELVNALKTVSTLEVRVVDYKYKELEFSEQLRITHNSDIFIGIHGAGLTHLLFLPDWAVVFELY 446 The following BLAST results are available for this feature:
BLAST of EWM29240.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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