EWM29240.1, cds1436 (CDS) Nannochloropsis gaditana

Overview
NameEWM29240.1
Unique Namecds1436
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:637503..637542 +
Alignment locationCM002457.1:637633..639134 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29240.1
Productputative glycosyltransferase aer61
Orig transcript idgnl|cribi|Naga_100119g14.7998.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:637503..637542 +
CM002457.1supercontigCM002457.1:637633..639134 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016757transferase activity, transferring glycosyl groups
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR007657Glycosyltransferase_AER61
Homology
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|585111762|gb|EWM29240.1| (putative glycosyltransferase aer61 [Nannochloropsis gaditana])

HSP 1 Score: 1060.83 bits (2742), Expect = 0.000e+0
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0
Query:    1 MKEDNEHAMLIESGHASPGPQKTTRTSSTCTQSSPCQAMIASRKARLVLMLCWVLTVTSAALSFLRGKQLPVRLLKESRVTCHGNSTETRQCVFRDVIVENGVIWLYKTHPDSGIPRVLCSQVNQPSSFARECEIRIVSDGRKYAHLLRKASKSLLLDVGVALSRLNPSNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEGDSLLDGEIWRQILPEVAMVHPLGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQIHLFATVASITVAVDAFKNHMKDALRLWRIKRKYAAATTPAEFMKLQAQIVETRTMARDPAPLCAR 513
            MKEDNEHAMLIESGHASPGPQKTTRTSSTCTQSSPCQAMIASRKARLVLMLCWVLTVTSAALSFLRGKQLPVRLLKESRVTCHGNSTETRQCVFRDVIVENGVIWLYKTHPDSGIPRVLCSQVNQPSSFARECEIRIVSDGRKYAHLLRKASKSLLLDVGVALSRLNPSNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEGDSLLDGEIWRQILPEVAMVHPLGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQIHLFATVASITVAVDAFKNHMKDALRLWRIKRKYAAATTPAEFMKLQAQIVETRTMARDPAPLCAR
Sbjct:    1 MKEDNEHAMLIESGHASPGPQKTTRTSSTCTQSSPCQAMIASRKARLVLMLCWVLTVTSAALSFLRGKQLPVRLLKESRVTCHGNSTETRQCVFRDVIVENGVIWLYKTHPDSGIPRVLCSQVNQPSSFARECEIRIVSDGRKYAHLLRKASKSLLLDVGVALSRLNPSNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEGDSLLDGEIWRQILPEVAMVHPLGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQIHLFATVASITVAVDAFKNHMKDALRLWRIKRKYAAATTPAEFMKLQAQIVETRTMARDPAPLCAR 513          
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|219120400|ref|XP_002180939.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407655|gb|EEC47591.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 402.905 bits (1034), Expect = 3.054e-132
Identity = 195/422 (46.21%), Postives = 276/422 (65.40%), Query Frame = 0
Query:   78 SRVTCHGNSTETRQCVFRDVIVENGVIWLYKTHP---DSGIPRVLCSQVNQPSSFARECEIRIVSDGRKYAHLLRKASKSLLLDVGVALSRLNPSNVYHAIFEDLIPTIA-MMRKVGNVSVDPTAMSDALRQRR----WGVFITDNE-GDSLLDGEIWRQILPEVAMVHPLGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQIHLFATVASITVAVDAFKNHMKDALRLWRIKRKYAAATTPAEF 490
            S   C G+S +TR+CVF +V+V++GV WL    P    +  P +LCS  N P    + C++R  +D   +  LL   ++S     GVAL RLNP N YH +FED+IP +A ++ + G  +V  +     ++Q +    WG+F+TD +     ++ + W ++LPEV +VHP    + V  L+AG+ V C+HWG C+PT+RP GLF+PPDAA++FR  VFHR+GI+E     A  + S      PR+TLVQR++TRR++NL E+ +A+ A +G   R+VDM+ LS+REQ+ L+HDTDIYVLVHGGALAN LWLP  A+I+DIYP+GF IS  S ++H IRKALEP   +GH PFQV ++ GQ +L+GPL  GCVC + ECQ H+F T A I +  D F+ HM++AL +WR +  Y    +P EF
Sbjct:   47 SHFQCQGDSRDTRRCVFHNVVVQDGVFWLEAPDPRDPSAAPPSLLCSTTNGPEKHTKPCDVRFAADAFAWRTLLDATTESRRFATGVALYRLNPGNAYHVLFEDMIPIVANLLDRTGGTAVSYSPGHADVKQHQPRAPWGLFVTDRKITAKAMEDKFWNELLPEVTVVHPTTEVYHVDTLLAGSGVPCSHWGLCRPTNRPVGLFDPPDAAITFRHLVFHRYGIQE----EAPNAMSLPRQNPPRITLVQRTTTRRIRNLQEVQDAVKAGTGTVARLVDMAELSLREQISLSHDTDIYVLVHGGALANTLWLPPRALIIDIYPHGFMISGRSALLHSIRKALEPAFAVGHLPFQVENTPGQEILEGPLAPGCVCSAFECQSHVFHTSAWIHIDPDRFQTHMQEALHIWR-EANYTRPISPEEF 463          
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|553178774|ref|XP_005852603.1| (hypothetical protein NGA_2058100, partial [Nannochloropsis gaditana CCMP526] >gi|422295930|gb|EKU23229.1| hypothetical protein NGA_2058100, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 252.292 bits (643), Expect = 9.902e-78
Identity = 119/226 (52.65%), Postives = 157/226 (69.47%), Query Frame = 0
Query:  224 EIWRQILPEVAMVHP-LGRAHRVRKLIAGTQVSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLLDGPLPAGCVCRSLECQI 448
            + W++ LPE+ +V P     + V+ L+AGT   CAHWGHCQP +RP G+F+PPDAAL+ R  VFHR+GI   +E     +        PRVTLVQRS +R + NL E+V  +    G+SP+VVDM+ LS+ EQV LA++TDI++LVHGGAL ++LWLP  A+I+DIYP+GF I HHSGIVHWIRK++EP   +GH PF V +S GQ    GPL +GCVC +  CQ 
Sbjct:    1 KFWKEFLPEIIIVPPSKNHIYHVQNLLAGTGTPCAHWGHCQPDNRPRGIFDPPDAALNLRSLVFHRYGI---LEREQLVTIRVPRKDPPRVTLVQRSKSRCIYNLQEVVSMIEVQMGSSPKVVDMAQLSIEEQVLLAYNTDIFILVHGGALTHILWLPTRALIIDIYPHGFSIDHHSGIVHWIRKSMEPAYHIGHLPFAVETSVGQSTTQGPLISGCVCHTAGCQF 223          
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|1160125672|ref|XP_020388209.1| (EGF domain-specific O-linked N-acetylglucosamine transferase isoform X2 [Rhincodon typus])

HSP 1 Score: 70.0922 bits (170), Expect = 2.259e-10
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 0
Query:  308 LGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY 389
            +G  RVTL+ RS+  RR+ N  E+V+AL  V+    RVVD  ++   EQ+ + H++DI++ +HG  L +LL+LP+ A++ ++Y
Sbjct:   22 IGKIRVTLLVRSTQYRRILNQDELVKALKTVTVFDVRVVDYKDIRFLEQLKITHNSDIFISIHGAGLTHLLFLPDWAVVFELY 104          
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|1160125670|ref|XP_020388208.1| (EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1 [Rhincodon typus])

HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-9
Identity = 33/83 (39.76%), Postives = 56/83 (67.47%), Query Frame = 0
Query:  308 LGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY 389
            +G  RVTL+ RS+  RR+ N  E+V+AL  V+    RVVD  ++   EQ+ + H++DI++ +HG  L +LL+LP+ A++ ++Y
Sbjct:  115 IGKIRVTLLVRSTQYRRILNQDELVKALKTVTVFDVRVVDYKDIRFLEQLKITHNSDIFISIHGAGLTHLLFLPDWAVVFELY 197          
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|556973116|ref|XP_005994637.1| (PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Latimeria chalumnae] >gi|556973119|ref|XP_005994638.1| PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Latimeria chalumnae] >gi|556973122|ref|XP_005994639.1| PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Latimeria chalumnae] >gi|942140972|ref|XP_014343045.1| PREDICTED: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Latimeria chalumnae])

HSP 1 Score: 71.2478 bits (173), Expect = 1.922e-9
Identity = 66/294 (22.45%), Postives = 120/294 (40.82%), Query Frame = 0
Query:  158 DVGVALSRLNPSNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEGDSLLDGEIWRQILPEVAMVHPLGRAH--RVRKLIAGTQ--------VSCAHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPYGFYISHHSGIVHWIRKALEPGLGLGHHPFQVNSSEGQVLL-DGPLPAGCV 440
            DV + L+R NP N+ H   +DL+P    M++  ++ ++    S  +    W      NEG   L  +++R +    +   PL + H   + KL+  T+         +   +G  QP    + +    +    F  FV  R             ++S  G     + +  R+  R + N  E++ AL          V + + S  + V +     + V +HG  L   ++LP+GA IV+++PY     H++    +   A  PG+GL +  +Q    E  +   D P   G +
Sbjct:  157 DVALILNRFNPDNLMHIFHDDLLPIFYTMQQFPDLDLE----SRLVFMEGW------NEG---LHFDLYRLL----SNKQPLLKEHLNTLGKLLCYTKSYVGLSKMTTWYQYGFVQPQGPKANILVSGNEIRQFTNFVMERLN-----------ASSETGSKEEYIVVFSRTINRLILNEAELILALAQEFQIKTITVSLDDHSFTDIVQIISKASMLVSMHGAQLVTAIFLPQGATIVELFPYAVNPEHYTP---YKTLASLPGMGLQYIAWQNTKQENTITFPDRPWDLGGI 419          
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|1009552510|ref|XP_015911737.1| (protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Parasteatoda tepidariorum] >gi|1009552512|ref|XP_015911738.1| protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Parasteatoda tepidariorum])

HSP 1 Score: 68.1662 bits (165), Expect = 1.088e-8
Identity = 61/236 (25.85%), Postives = 106/236 (44.92%), Query Frame = 0
Query:  169 SNVYHAIFEDLIPTIAMMRKVGNVSVDPTAMSDALRQRRWGVFITDNEG-----DSLLD-GEIWRQILPEVAMVHPLGRAHRV----RKLIAGTQVSC---AHWGHCQPTDRPSGLFNPPDAALSFRRFVFHRFGIEEGVEETAHASTSTIGLGVPRVTLVQRSSTRRLQNLGEIVEALTAVSGASPRVVDMSNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIYPY 391
            SN +H  ++ L+P    + +    S        AL     G+  T  EG     D+  D    W Q+L        L + HR+    R+L    +  C   A++G       P   F+ P+   S+  FV   FGI+        +  + +    P++ L+ R   R++ N  E+V++++AV  A   VVD S +SV+EQ+      ++ + ++G  L N L+LP+ ++ V + PY
Sbjct:  122 SNYFHLHYDTLLPLFVALHQDSTKSSSGAIKDIALLP---GIETTRGEGIDWNTDAFNDLRSYWMQLLT------ALSKPHRLLPLDRRLAGINKTVCFEEAYFG------TPKIDFSSPELLQSYALFVKKAFGIK--------SPKTNVDSKKPKIGLIHREGRRKILNEAELVKSMSAV--AKVDVVDFSFMSVKEQIEKVQQYNVLIGMNGAGLVNALYLPKSSVAVQLVPY 332          
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|734561503|gb|KHN87585.1| (EGF domain-specific O-linked N-acetylglucosamine transferase [Toxocara canis])

HSP 1 Score: 67.781 bits (164), Expect = 2.420e-8
Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 0
Query:  269 SGLFNPPDAALSFRRFVFHRFGI-EEGVEETAHASTSTIGLGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDM-SNLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY-----PYGFYISHHSGIVH--WIRKALEPGLGLGHHP 419
            SGLF+      +F +F+ HR  + +EG             L   RVTL+ RS+  RR+ N  E+ E L  + G   + VD  S +S  +Q+ + H+TDI++ +HG  L +LL+LP+ A I +IY        + ++   G+ +  W +++    +G G HP
Sbjct:  340 SGLFH------AFSKFILHRLRVKQEGP-----------VLNSIRVTLLSRSTKFRRIVNEDELFEVLNGIPGVIAQRVDYNSQMSFLDQLSVTHNTDIFIGMHGSGLTHLLFLPDWAAIFEIYNCEDISCYYDLARLRGVKYFTWKKESEMEQIGEGRHP 483          
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|998717022|ref|XP_015496358.1| (PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717024|ref|XP_015496359.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717026|ref|XP_015496360.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717028|ref|XP_015496361.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717030|ref|XP_015496362.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717032|ref|XP_015496363.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717036|ref|XP_015496365.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|998717038|ref|XP_015496366.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major] >gi|1099020875|ref|XP_018863632.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Parus major])

HSP 1 Score: 67.3958 bits (163), Expect = 2.471e-8
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query:  269 SGLFNPPDAALSFRRFVFHRFGI-EEGVEETAHASTSTIGLGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDMS--NLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY 389
            +GLF       +F + V HR  I +EG ++           G  RVT++ RS+  RR+ N  E+V AL  VS    RVVD     L   EQ+ + H++DI++ +HG  L +LL+LP+ A++ ++Y
Sbjct:  339 TGLFR------AFSQHVLHRLNITQEGPKD-----------GKIRVTILARSTDYRRILNQNELVNALKTVSTLEVRVVDYKYKELEFSEQLRITHNSDIFIGIHGAGLTHLLFLPDWAVVFELY 446          
BLAST of EWM29240.1 vs. NCBI_GenBank
Match: gi|543355377|ref|XP_005522061.1| (PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis] >gi|929437115|ref|XP_014107295.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis] >gi|929437123|ref|XP_014107296.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis] >gi|929437125|ref|XP_014107297.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis] >gi|929437131|ref|XP_014107298.1| PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Pseudopodoces humilis])

HSP 1 Score: 67.3958 bits (163), Expect = 2.721e-8
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query:  269 SGLFNPPDAALSFRRFVFHRFGI-EEGVEETAHASTSTIGLGVPRVTLVQRSST-RRLQNLGEIVEALTAVSGASPRVVDMS--NLSVREQVGLAHDTDIYVLVHGGALANLLWLPEGAMIVDIY 389
            +GLF       +F + V HR  I +EG ++           G  RVT++ RS+  RR+ N  E+V AL  VS    RVVD     L   EQ+ + H++DI++ +HG  L +LL+LP+ A++ ++Y
Sbjct:  339 TGLFR------AFSQHVLHRLNITQEGPKD-----------GKIRVTILARSTDYRRILNQNELVNALKTVSTLEVRVVDYKYKELEFSEQLRITHNSDIFIGIHGAGLTHLLFLPDWAVVFELY 446          
The following BLAST results are available for this feature:
BLAST of EWM29240.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111762|gb|EWM29240.1|0.000e+0100.00putative glycosyltransferase aer61 [Nannochloropsi... [more]
gi|219120400|ref|XP_002180939.1|3.054e-13246.21predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|553178774|ref|XP_005852603.1|9.902e-7852.65hypothetical protein NGA_2058100, partial [Nannoch... [more]
gi|1160125672|ref|XP_020388209.1|2.259e-1039.76EGF domain-specific O-linked N-acetylglucosamine t... [more]
gi|1160125670|ref|XP_020388208.1|1.090e-939.76EGF domain-specific O-linked N-acetylglucosamine t... [more]
gi|556973116|ref|XP_005994637.1|1.922e-922.45PREDICTED: protein O-linked-mannose beta-1,4-N-ace... [more]
gi|1009552510|ref|XP_015911737.1|1.088e-825.85protein O-linked-mannose beta-1,4-N-acetylglucosam... [more]
gi|734561503|gb|KHN87585.1|2.420e-831.06EGF domain-specific O-linked N-acetylglucosamine t... [more]
gi|998717022|ref|XP_015496358.1|2.471e-835.20PREDICTED: EGF domain-specific O-linked N-acetylgl... [more]
gi|543355377|ref|XP_005522061.1|2.721e-835.20PREDICTED: EGF domain-specific O-linked N-acetylgl... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1438rna1438Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications