EWM29263.1, cds1414 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|585111786|gb|EWM29263.1| (hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 1059.28 bits (2738), Expect = 0.000e+0 Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0
Query: 1 MTRSAPCLPLFAFFVLLVPSVAAFLRPPRSRSTRPRALHSREPARDLYTTSLFENPSEDPLLQEKYWEDLFMQGSAARGESPSTEGTGPEEAVGVDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQAVAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWYHTAERKAKVEEEQLAAKRARLEAQEKESKDSSRTSAEDGAVGPLKLSSLASSFKTSTEPFFKDKAAVHVNTMETDDYLTHFITKEFVDGEVEDLKEIVPLIDNWVRQGKQRPPKKKAVGGTGSTSDTSSGVDCIEAPQDKEESKFCIACRAILPVRAKFCSACGEKQE 513
MTRSAPCLPLFAFFVLLVPSVAAFLRPPRSRSTRPRALHSREPARDLYTTSLFENPSEDPLLQEKYWEDLFMQGSAARGESPSTEGTGPEEAVGVDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQAVAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWYHTAERKAKVEEEQLAAKRARLEAQEKESKDSSRTSAEDGAVGPLKLSSLASSFKTSTEPFFKDKAAVHVNTMETDDYLTHFITKEFVDGEVEDLKEIVPLIDNWVRQGKQRPPKKKAVGGTGSTSDTSSGVDCIEAPQDKEESKFCIACRAILPVRAKFCSACGEKQE
Sbjct: 1 MTRSAPCLPLFAFFVLLVPSVAAFLRPPRSRSTRPRALHSREPARDLYTTSLFENPSEDPLLQEKYWEDLFMQGSAARGESPSTEGTGPEEAVGVDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQAVAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWYHTAERKAKVEEEQLAAKRARLEAQEKESKDSSRTSAEDGAVGPLKLSSLASSFKTSTEPFFKDKAAVHVNTMETDDYLTHFITKEFVDGEVEDLKEIVPLIDNWVRQGKQRPPKKKAVGGTGSTSDTSSGVDCIEAPQDKEESKFCIACRAILPVRAKFCSACGEKQE 513
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|873230774|emb|CEM09997.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 147.902 bits (372), Expect = 4.314e-36 Identity = 94/253 (37.15%), Postives = 124/253 (49.01%), Query Frame = 0
Query: 95 VDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAM---VSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQAVAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIW 344
V+V++FDLDDTLW V+ +A L+A+L YP M +S ++ LM + ++ + DP + V T LRK AL A K EP+ + + AFQ W DARHDV E G L+ L L++ G R+ AITNGN RI LS Y F+FCINAE VGA K + + Y AA++ AG G RWVH+GDD S D++ AK RTIW
Sbjct: 95 VEVITFDLDDTLWTANPVLDSAKDRLEAYLDREYPRMGRWLSQSYGSIDDLMRAIYRRKQKR---DPRLANVVTYLTRLRKEALKEAAVKTGY-EPKLLVDQAFQVWSDARHDVLEFLPDGTLETLSSLRSTGYRIGAITNGNARTERIEV---------------------------------LSEY----FDFCINAEDVGASKPSKKVYEAAMRVAGYMRSPGDRWVHVGDDLSADVVPAKQQ-SWRTIW 305
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|219122695|ref|XP_002181676.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406952|gb|EEC46890.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 135.191 bits (339), Expect = 3.049e-31 Identity = 143/500 (28.60%), Postives = 206/500 (41.20%), Query Frame = 0
Query: 56 PSEDPLLQEKYWEDLFMQGSAARGESP-STEGT-GPEEAVGVDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLE-DPEDSKSVVRFTDLRKLALTALAKKCDMPEPQAV---AEAAFQAWHDARHDVQELFFPGAL-DLLQELKA------RGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQ-AG-----------------VGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWYHTAERKAKVEEEQLAAKRARLEAQEKESKDSSRTSAEDGAVGPLKLSSLASSFKTSTEPFFKDKAAVHVNTMETD--DYLTHFITKEFVDGEVEDLKEIVPLIDNWVRQG--KQRPPKKKAVGGTGSTSDT-------SSGVDCIEAPQDKE-ESKFCIACRAILPVRAKFCSACGEKQ 512
P EDPL WE ++ +G A +P EG +++ V VVSFDLD+TLW IS AN+AL AFL A +V + + +M +L K++ E + + E +K+ T LRK A+ + + ++ AE AFQ W +ARHD A+ + LQE+ A + + AIT+GN D P L+ LS Y F FC+NAEKVG K R Y+ A+Q+ AG + +G WVH+GDDF +D++AAK D +R++W +V+ K R S E KD + V M+ DYL + + +EF D V+ E+ +++ W +G K P + + S + P K SKFC+ CR LP AKFCS CGE Q
Sbjct: 6 PEEDPL----KWERMYQEGGNA---APFKLEGMMNLQQSSEVRVVSFDLDNTLWVTSATISAANEALAAFLDAR--GVVQPQ--RIETIMGILFKENKERYCPIEVEQAKAPALLTLLRKDAIRKILLDDNGYSSESAECSAEEAFQTWTNARHDAITFNMAEAVKECLQEIAAIQTSDGHSVVIGAITDGNSD-------------------PRLI--------------DELSKY----FHFCVNAEKVGISKPDKRIYLKAVQELAGHPSLKHLLPDDDAQDYELESRLGPWWVHVGDDFIKDVVAAK-DLNMRSVWARELVLNKQVDYALSEGKPER-----------------------------------SVEALVKDVSKNEVVKMQVGATDYLVNSLHQEFADAIVDRFGEVATVLNAWHSEGLVKTSTPLQIVENDVTVQEEVVLRPEVESGDTENDRTPNIKNGGSKFCLFCRNTLPGAAKFCSECGEGQ 421
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|1210529113|dbj|GAX12259.1| (hypothetical protein FisN_1Hh190 [Fistulifera solaris]) HSP 1 Score: 125.946 bits (315), Expect = 4.903e-28 Identity = 126/459 (27.45%), Postives = 186/459 (40.52%), Query Frame = 0
Query: 95 VDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTAL---AKKCDMPEPQAVAEAAFQAWHDARHD-VQELFFPGALDLLQELKAR----GLRLC--AITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAG--------------------VGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWYHTAERKAKVEEEQLAAKRARLEAQEKESKDSSRTSAEDGAVGPLKLSSLASSFKTSTEPFFKDKAAVHVNTMET--DDYLTHFITKEFVDGEVEDLKEIVPLIDNWVRQGKQRPPKKKAVGGTGSTS-------DTSSGVDCIEA--PQDKEESKFCIACRAILPVRAKFCSACGEKQ 512
V VVSFDLD+TLW I AN AL +FL + + V +M L +K+ + E +K+ V T LRK A+ + A E A++E AF+ W ARHD + A + L+E+ + G R+ AIT+GN D R+ A AP F+FCINAE VG K R Y+ AI+Q + E VG WVH+GDDF++D++A K +RT+W +E + + + D + P + S E K + + V ME DYL+ + KEF D ++ ++ ++ W + P ++ + +SS +EA P + +E+KFCI C LP AKFCS CG+ Q
Sbjct: 24 VRVVSFDLDNTLWNTSATIDAANDALASFLDSRKIV----QPIRVEKVMGELFQKNKSRYCPLDERAKAPVYLTLLRKDAIRNVLVEANGYSTEEATALSEEAFELWVQARHDAILNNMARSAANCLKEISSMQRKDGHRIIIGAITDGNSDPQRVEAL----------------------------AP---------FFDFCINAESVGVGKPDKRVYLEAIRQVASMPSMQDIFGNSPRTLPVDSLEEKVGPFWVHVGDDFTKDVVAGKG-LNMRTVW-----------------------CRELILDNLKQQNLVDEEIPP----------ERSVEDLVKQVSDMKVVKMEIGAGDYLSDMLQKEFADSVIDSFIDLSSVLKEW--HTTETPSASSSLPAEDAQQVSPLQLEKSSSRALALEATEPVNGDETKFCIFCGTKLPSVAKFCSGCGQAQ 405
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|1210520251|dbj|GAX21134.1| (hypothetical protein FisN_1Lh190 [Fistulifera solaris]) HSP 1 Score: 122.865 bits (307), Expect = 5.498e-27 Identity = 121/463 (26.13%), Postives = 189/463 (40.82%), Query Frame = 0
Query: 95 VDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCD---MPEPQAVAEAAFQAWHDARHD-VQELFFPGALDLLQELKAR----GLRLC--AITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAG--------------------VGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWYHTAERKAKVEEEQLAAKRARLEAQEKESKDSSRTSAEDGAVGPLKLSSLASSFKTSTEPFFKDKAAVHVNTMET--DDYLTHFITKEFVDGEVEDLKEIVPLIDNW-------------VRQGKQRPPKKKAVGGTGSTSDTSSGVDCIEAPQDKEESKFCIACRAILPVRAKFCSACGEKQ 512
V VVSFDLD+TLW I AN AL +FL + + V +M L +K+ + + +K+ V T LRK A+ + ++ + + +++E AF+ W ARHD + A+ L+E+ + G R+ AIT+GN D R+ A AP F+FCINAE VG K R Y+ AI+Q + E VG WVH+GDDF++D++A K +RT+W + L++ ++++ + E S E K + + V ME DYL+ + KEF D ++ ++ ++ W +Q PP + S + ++ +E P + +E+KFCI C LP AKFCS CG+ Q
Sbjct: 15 VRVVSFDLDNTLWNTSATIDAANDALASFLDSRKIV----QPIRVEKVMGELFQKNKSRYCPLDQRAKTPVYLTLLRKDAIRNILEEANGYCTEKATSLSEEAFELWVQARHDAILNNMAVSAVHCLKEISSMQRKDGHRIIIGAITDGNSDPKRVQAL----------------------------AP---------FFDFCINAESVGVGKPDKRVYLEAIRQVASMPSMQDIFGNSPGTLPVDSLEEKVGPFWVHVGDDFTKDVVAGKG-LNMRTVW----------------CRELILDSLKQQTVVNKEIPPE-----------------RSVEDLVKQVSEMKVVKMEIGAGDYLSDMLQKEFADSVIDSFIDLSSVLKEWHAIEPTPASSLLPAEDSQQVPPLQ-----VEKASLRTITLEVVE-PVNGDETKFCIFCGTKLPSVAKFCSGCGQAQ 396
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|551646513|ref|XP_005826043.1| (hypothetical protein GUITHDRAFT_114938 [Guillardia theta CCMP2712] >gi|428170135|gb|EKX39063.1| hypothetical protein GUITHDRAFT_114938 [Guillardia theta CCMP2712]) HSP 1 Score: 92.0485 bits (227), Expect = 1.576e-16 Identity = 85/306 (27.78%), Postives = 136/306 (44.44%), Query Frame = 0
Query: 97 VVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVL------AKKHPEEF-LEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQAVAEAAFQAWHDARHDVQE-LFFPGALDLLQELKAR--GLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGA---RKRTGRPYMAAIQQA-----------GVGEGVG--KRWVHIGDDFSEDILAAKSDFKLRTIWYHTAERKAKVEEEQLAAKRARLEAQEKESKDS 376
V+SFDLDDTLW V+ +AN+A++++L NYP P +A+ ++ A+K EE +E+ S + +R T LR LA A D E +A ++ AF W R+ E L FPGA+ LQE+K+ + AITNG +++ + + +F+F ++AE+ RK + R + A+ +A + V RW+H+GDD DIL A +RT+W A+ +++ A + + A EK KD+
Sbjct: 106 VISFDLDDTLWPTVDVVMSANRAMESWLNLNYPGT-----PNATAIQGIMKAERERARKECEELGVEEKPMSYTEMRITALR-LATEAAGYSRD--EAEAASKNAFDVWLQERNAAGERLLFPGAVSALQEIKSMYPDVLFGAITNGRANVTEMGSLR-------------------------------------SLFDFSVSAEEPEVFPDRKPSTRIFWEAVTRAEKRLKDRSRRKDIDSLVPHLSRWIHVGDDLVNDILPA-GQIGMRTVWIEGAQDRSQ-------AFYSTMSADEKAKKDT 358
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|517548225|ref|WP_018718433.1| (hypothetical protein [Arhodomonas aquaeolei]) HSP 1 Score: 87.0409 bits (214), Expect = 1.032e-15 Identity = 76/252 (30.16%), Postives = 112/252 (44.44%), Query Frame = 0
Query: 95 VDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDM--PEPQAVAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIW 344
V V+FDLD TLW VI +A + A+L ANYPA+ + P VLA + E + PE + V + +R+ A + E + + E F + DARHD+ + F A+ +L+ L+ARG+RL A+TNGN DI R+ G F+F + A VGA K + + AA AGV G VH+GDD D++ A + ++ +W
Sbjct: 9 VTAVTFDLDYTLWDLAGVIEHAEEVAYAYLDANYPAVTAALSPEA-----VLALR-SEVVADRPEIAHDV---SAMRREAFRRAGTRAGYSAAEVETLVEDTFHVFVDARHDI--VLFDDAVPVLEWLRARGVRLGALTNGNADIRRL--------------------------------------RMDGYFDFALAAVDVGAAKPSHLVFEAARGHAGVSMG---EIVHVGDDPHSDVIGAAA-AGMQPVW 207
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|515537473|ref|WP_016970539.1| (HAD family hydrolase [Pseudomonas tolaasii] >gi|1168990241|gb|ARB28380.1| HAD family hydrolase [Pseudomonas tolaasii]) HSP 1 Score: 86.2705 bits (212), Expect = 1.647e-15 Identity = 72/256 (28.12%), Postives = 111/256 (43.36%), Query Frame = 0
Query: 93 VGVDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQA--VAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWYH 346
+ + +++FDLDDTLW VI NA +++ +L N + L + L + ++HPE R + LR L ++ P+PQA +A+ ++A+ ARH + FP A +LQ L+ L L ITNGN D+ R+ L+ Y F F + AE +G K R + A+Q+ GV G VHIGD +DI A+ LR +W++
Sbjct: 1 MSIKLITFDLDDTLWDNVPVIINAEASMREWLAVNAANVGDLPLEHFAKLRQTVLERHPE----------LKYRISILRHRVLMHAFEEAGYPQPQATEMADVCYEAFIHARHQLTP--FPEAEPMLQALRQHFL-LGVITNGNADVQRVG----------------------------------LADY----FHFALRAEDIGIAKPDARLFQEALQRGGVDAGQA---VHIGDHPGDDIAGAQQA-GLRAVWFN 201
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|802118861|ref|WP_046034876.1| (MULTISPECIES: haloacid dehalogenase [Pseudomonas fluorescens group] >gi|799212255|gb|KJZ56838.1| HAD family hydrolase [Pseudomonas fluorescens] >gi|799215147|gb|KJZ59667.1| HAD family hydrolase [Pseudomonas fluorescens] >gi|1028581189|gb|OAJ49437.1| HAD family hydrolase [Pseudomonas marginalis]) HSP 1 Score: 85.5001 bits (210), Expect = 2.681e-15 Identity = 73/256 (28.52%), Postives = 115/256 (44.92%), Query Frame = 0
Query: 93 VGVDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQA--VAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWYH 346
+ + +++FDLDDTLW VI +A +++ +L AN + L ++L + ++HPE L+ R + LR L ++ P+P+A +A+ F+A+ ARH Q FP A +LQ L+ L L ITNGN D+ R+ L+ Y F F + AE +G K R + A+Q+ GV G VH+GD +DI A+ LR +W++
Sbjct: 1 MSIKLITFDLDDTLWDNVPVIISAEASMREWLAANASKVGDLPLEHFASLRQQVLQRHPE--LKH--------RISILRHRVLMHAFEEAGYPQPEATQMADVCFEAFIHARH--QLTVFPEAEPMLQALRQHFL-LGVITNGNADVQRVG----------------------------------LADY----FHFALRAEDIGIAKPDARLFQEALQRGGVEAGAA---VHVGDHPGDDIAGAQQA-GLRAVWFN 201
BLAST of EWM29263.1 vs. NCBI_GenBank
Match: gi|506366784|ref|WP_015886503.1| (haloacid dehalogenase [Pseudomonas fluorescens] >gi|229365182|emb|CAY53451.1| putative hydrolase [Pseudomonas fluorescens SBW25] >gi|1099789175|emb|SFU72098.1| putative hydrolase of the HAD superfamily [Pseudomonas sp. OV546]) HSP 1 Score: 85.5001 bits (210), Expect = 2.707e-15 Identity = 73/255 (28.63%), Postives = 114/255 (44.71%), Query Frame = 0
Query: 93 VGVDVVSFDLDDTLWCGKTVISNANKALQAFLQANYPAMVSDELPTVSALMWVLAKKHPEEFLEDPEDSKSVVRFTDLRKLALTALAKKCDMPEPQA--VAEAAFQAWHDARHDVQELFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVGKRWVHIGDDFSEDILAAKSDFKLRTIWY 345
+ + +++FDLDDTLW VI +A +++ +L AN + L ++L + ++HPE L+ R + LR L ++ P+P+A +A+ F+A+ ARH Q FP A +LQ L+ L L ITNGN D+ R+ L+ Y F F + AE +G K R + A+Q+ GV G VH+GD +DI A+ LR +W+
Sbjct: 1 MSIKLITFDLDDTLWDNVPVIISAEASMREWLAANASKVGDLPLEHFASLRQQVLQRHPE--LKH--------RISILRHRVLMHAFEEAGYPQPEATQMADVCFEAFIHARH--QLTVFPEAEPMLQALRQHFL-LGVITNGNADVQRVG----------------------------------LADY----FHFALRAEDIGIAKPDARLFQEALQRGGVEAGAA---VHVGDHPGDDIAGAQQA-GLRAVWF 200 The following BLAST results are available for this feature:
BLAST of EWM29263.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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