EWM29298.1, cds1404 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|585111821|gb|EWM29298.1| (rrna methylase family [Nannochloropsis gaditana]) HSP 1 Score: 1678.69 bits (4346), Expect = 0.000e+0 Identity = 817/817 (100.00%), Postives = 817/817 (100.00%), Query Frame = 0
Query: 1 MRTVALLQSILGALSWYPGSDIFILVRERWADALLRDLFAATAKLTSRADGRGLFLSLVLDDIWRSLALLHRMHSSHSNNDSYGASIPVEMDFFFAAIETASRNSLPDILYSMNHYLLSYLFPSQNTLTAQDIVQIRQKRLKTIVMLVLRCVEECNYRRRVAQLAIDMVFSPLVLKDPAFCRGVDNHVRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRELADDVYQQSIDEGREFDFSAGNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYVGPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVPVHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLRDPLFEKISSSAGRWIKIEEVHEGRTRAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQHRGQADAKE 817
MRTVALLQSILGALSWYPGSDIFILVRERWADALLRDLFAATAKLTSRADGRGLFLSLVLDDIWRSLALLHRMHSSHSNNDSYGASIPVEMDFFFAAIETASRNSLPDILYSMNHYLLSYLFPSQNTLTAQDIVQIRQKRLKTIVMLVLRCVEECNYRRRVAQLAIDMVFSPLVLKDPAFCRGVDNHVRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRELADDVYQQSIDEGREFDFSAGNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYVGPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVPVHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLRDPLFEKISSSAGRWIKIEEVHEGRTRAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQHRGQADAKE
Sbjct: 1 MRTVALLQSILGALSWYPGSDIFILVRERWADALLRDLFAATAKLTSRADGRGLFLSLVLDDIWRSLALLHRMHSSHSNNDSYGASIPVEMDFFFAAIETASRNSLPDILYSMNHYLLSYLFPSQNTLTAQDIVQIRQKRLKTIVMLVLRCVEECNYRRRVAQLAIDMVFSPLVLKDPAFCRGVDNHVRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRELADDVYQQSIDEGREFDFSAGNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYVGPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVPVHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLRDPLFEKISSSAGRWIKIEEVHEGRTRAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQHRGQADAKE 817
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|301095544|ref|XP_002896872.1| (SpoU rRNA Methylase family [Phytophthora infestans T30-4] >gi|262108622|gb|EEY66674.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]) HSP 1 Score: 279.641 bits (714), Expect = 1.431e-79 Identity = 208/651 (31.95%), Postives = 329/651 (50.54%), Query Frame = 0
Query: 188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVF--SALLPSQPLIQ--------STNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
++ +L I G+ R +V RL W++ VS A F ELVELL+ +E L D+ Q + D G F +S GN T VT K +R+++L + D+ ++S ++ +L RL + + ++ +L+S + +KLR+WQA+C++ V K + + + TA +PSVR+Y E+ + KFP ++ L+ L D N+ P ASL+L S V KL + G LL+ +LPWL+ H TR++AQ YLL+++L + ++ + G +L GT R+L +++E + ++ + +L +L I E +L+P + L+ AM LY + + ++F P T E ++ +S+ S + Q+KI + + + LP+ + NAR Q +MCASL+++VPNLAGLARTCEIF KLV+P++R+ + D F +S++A +W+ +EEV +G R + R K+EGYTIV +EQT S L+ LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q
Sbjct: 75 MKLWLAEFIRFGSRHRPNVVFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLATDAGAPFQGFQGYSPLDGNQTAAVTTHAKDR-----FVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKLNVTPEWQKQHMLNSDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKFPTEICSGVLLPMLGDANLMPQVGASLLL--------VSAYLVDTKLDDNSLDVDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHYLKQSSKDTPG---------LRFLEGTARYLSNNKECKRMLRRQARQLDEFHPDYESSLLGMLSSGFISE---FGELLPRDDALRFSEQLKTAMNELYAQYQLENF-------PPTPSEQKSSMEADSV---------------SGFLTVQRKIDTTALLLEDSALPAAMRADFDAARRGATLNARQRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 671
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|566009850|gb|ETI32761.1| (hypothetical protein F443_20491 [Phytophthora parasitica P1569]) HSP 1 Score: 288.5 bits (737), Expect = 5.683e-79 Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query: 188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
++Y++ I G+ R ++ RL W++ VS A F ELVELL+ +E L D+ Q ++D G F FS G T +T K +R+++L + D+ +++ ++ + +L+ RL + A D ++ +L+S + +KLR+WQA+C++ V+K + + + TA +PSVR+Y E+ + KFP ++ L+ L D N+ P ASL+L S V KL + G LL+ +LPWL+ H TR++AQ YLL+++L + + N+ PG + +L GT R+L +++E + ++ + +L +L I E +L+P + L+ AM LY + + ++F S + D ++T +R + DT + + + + A + + NAR Q +MCASL++++PNLAGLARTCEIF KL++P++R+ + D F +S++A +W+ +EEV +G R + R K+EGYTIV +EQT S L+ LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q
Sbjct: 770 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1366
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|970652235|gb|KUF90936.1| (methyltransferase TARBP1 [Phytophthora nicotianae]) HSP 1 Score: 288.5 bits (737), Expect = 6.046e-79 Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query: 188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
++Y++ I G+ R ++ RL W++ VS A F ELVELL+ +E L D+ Q ++D G F FS G T +T K +R+++L + D+ +++ ++ + +L+ RL + A D ++ +L+S + +KLR+WQA+C++ V+K + + + TA +PSVR+Y E+ + KFP ++ L+ L D N+ P ASL+L S V KL + G LL+ +LPWL+ H TR++AQ YLL+++L + + N+ PG + +L GT R+L +++E + ++ + +L +L I E +L+P + L+ AM LY + + ++F S + D ++T +R + DT + + + + A + + NAR Q +MCASL++++PNLAGLARTCEIF KL++P++R+ + D F +S++A +W+ +EEV +G R + R K+EGYTIV +EQT S L+ LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q
Sbjct: 726 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1322
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|568035360|gb|ETM33005.1| (hypothetical protein L914_19708 [Phytophthora parasitica]) HSP 1 Score: 288.5 bits (737), Expect = 6.076e-79 Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query: 188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
++Y++ I G+ R ++ RL W++ VS A F ELVELL+ +E L D+ Q ++D G F FS G T +T K +R+++L + D+ +++ ++ + +L+ RL + A D ++ +L+S + +KLR+WQA+C++ V+K + + + TA +PSVR+Y E+ + KFP ++ L+ L D N+ P ASL+L S V KL + G LL+ +LPWL+ H TR++AQ YLL+++L + + N+ PG + +L GT R+L +++E + ++ + +L +L I E +L+P + L+ AM LY + + ++F S + D ++T +R + DT + + + + A + + NAR Q +MCASL++++PNLAGLARTCEIF KL++P++R+ + D F +S++A +W+ +EEV +G R + R K+EGYTIV +EQT S L+ LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q
Sbjct: 770 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1366
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|567947318|gb|ETK73102.1| (hypothetical protein L915_19928 [Phytophthora parasitica]) HSP 1 Score: 288.5 bits (737), Expect = 6.312e-79 Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query: 188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
++Y++ I G+ R ++ RL W++ VS A F ELVELL+ +E L D+ Q ++D G F FS G T +T K +R+++L + D+ +++ ++ + +L+ RL + A D ++ +L+S + +KLR+WQA+C++ V+K + + + TA +PSVR+Y E+ + KFP ++ L+ L D N+ P ASL+L S V KL + G LL+ +LPWL+ H TR++AQ YLL+++L + + N+ PG + +L GT R+L +++E + ++ + +L +L I E +L+P + L+ AM LY + + ++F S + D ++T +R + DT + + + + A + + NAR Q +MCASL++++PNLAGLARTCEIF KL++P++R+ + D F +S++A +W+ +EEV +G R + R K+EGYTIV +EQT S L+ LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q
Sbjct: 770 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1366
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|570937326|gb|ETP02583.1| (hypothetical protein F441_20374 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 288.115 bits (736), Expect = 7.201e-79 Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query: 188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
++Y++ I G+ R ++ RL W++ VS A F ELVELL+ +E L D+ Q ++D G F FS G T +T K +R+++L + D+ +++ ++ + +L+ RL + A D ++ +L+S + +KLR+WQA+C++ V+K + + + TA +PSVR+Y E+ + KFP ++ L+ L D N+ P ASL+L S V KL + G LL+ +LPWL+ H TR++AQ YLL+++L + + N+ PG + +L GT R+L +++E + ++ + +L +L I E +L+P + L+ AM LY + + ++F S + D ++T +R + DT + + + + A + + NAR Q +MCASL++++PNLAGLARTCEIF KL++P++R+ + D F +S++A +W+ +EEV +G R + R K+EGYTIV +EQT S L+ LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q
Sbjct: 742 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1338
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|970655790|gb|KUF93897.1| (hypothetical protein AM588_10004286 [Phytophthora nicotianae]) HSP 1 Score: 286.96 bits (733), Expect = 1.176e-78 Identity = 203/641 (31.67%), Postives = 332/641 (51.79%), Query Frame = 0
Query: 188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
++Y++ I G+ R ++ RL W++ VS A F ELVELL+ +E L D+ Q ++D G F FS G T +T K +R+++L + D+ +++ ++ + +L+ RL + D ++ +L+S + +KLR+WQA+C++ V+K + + + TA +PSVR+Y E+ + KFP ++ L+ L D N+ P ASL+L S V KL + G LL+ +LPWL+ H TR++AQ YLL+++L + + N+ PG + +L GT R+L +++E + ++ + +L +L I E +L+P + L+ AM LY + + ++F S + D ++T +R + DT + + + + A + + NAR Q +MCASL++++PNLAGLARTCEIF KL++P++R+ + D F +S++A +W+ +EEV +G R + R K+EGYTIV +EQT S L+ LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q
Sbjct: 652 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVTPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1248
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|301096904|ref|XP_002897548.1| (SpoU rRNA Methylase family [Phytophthora infestans T30-4] >gi|262107008|gb|EEY65060.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]) HSP 1 Score: 277.33 bits (708), Expect = 1.338e-78 Identity = 208/651 (31.95%), Postives = 328/651 (50.38%), Query Frame = 0
Query: 188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD-FSA-----GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVF--SALLPSQPLIQ--------STNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
++ +L I G+ R +V RL W++ VS A F ELVELL+ +E L D+ Q + D G F F GN TT VT K +R+++L + D+ ++S ++ +L RL + + ++ +L+S + +KLR+WQA+C++ V K + + + TA +PSVR+Y E+ + KFP ++ L+ L D N+ P ASL+L S V KL + G LL+ +LPWL+ H TR++AQ YLL+++L + ++ + G +L GT R+L +++E + ++ + +L +L I E +L+P + L+ AM L + + ++F P T E ++ +S+ S + Q+KI + + + LP+ + NAR Q +MCASL+++VPNLAGLARTCEIF KLV+P++R+ + D F +S++A +W+ +EEV +G R + R K+EGYTIV +EQT S L+ LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q
Sbjct: 75 MKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLATDAGAPFQGFQGYSPLDGNQTTAVTTHAKDR-----FVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKLNVTPEWQKQHMLNSDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKFPTEICSGVLLPMLGDANLMPQVGASLLL--------VSAYLVDTKLDDNSLDVDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHYLKQSSKDTPG---------LRFLEGTARYLSNNKECKRMLRRQARQLDEFHPDYESSLLGMLSSGFISE---FGELLPRDDALRFSEQLKTAMNELNAQYQLENF-------PPTPSEQKSSMEADSV---------------SGFLTVQRKIDTTALLLEDSALPAAMRADFDAARRGATLNARQRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 671
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|301096892|ref|XP_002897542.1| (SpoU rRNA Methylase family [Phytophthora infestans T30-4] >gi|262107002|gb|EEY65054.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]) HSP 1 Score: 277.33 bits (708), Expect = 1.352e-78 Identity = 205/650 (31.54%), Postives = 328/650 (50.46%), Query Frame = 0
Query: 188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVF--SALLPSQPLIQ--------STNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
++ +L I G+ R +V RL W++ VS A F ELVELL+ +E L D+ Q + D G F +S GN T VT K +R+++L + D+ ++S ++ +L RL + + ++ +L+S + +KLR+WQA+C++ V K + + + TA +PSVR+Y E+ + KFP S +++P L A+L+ G + L S V KL + G LL+++LPWL+ H TR++AQ YLL+++L + ++ + G +L GT R+L +++E + ++ + +L +L I E +L+P + L+ AM LY + + ++F P T E ++ +S+ S + Q+KI + + + LP+ + NAR Q +MCASL+++VPNLAGLARTCEIF KLV+P++R+ + D F +S++A +W+ +EEV +G R + R K+E YTIV +EQT S L+ LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q
Sbjct: 75 MKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLATDAGAPFQGFQGYSPLDGNQTAAVTTHAKDR-----FVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKLNVTPEWQKQHMLNSDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKFP-------TEICSGVSLPMLGDANLMPQVGASLLLVSAYLVDTKLDDNSLDVDCGELLEIMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHYLKQSSKDTPG---------LRFLEGTARYLSNNKECKRMLRRQARQLDEFHPDYESSLLGMLSSGFISE---FGELLPRDDALRFSEQLKTAMNELYAQYQLENF-------PPTPSEQKSSMETDSV---------------SGILTVQRKIDTTALLLVDSALPAAMRADFDAARRGATLNARQRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKREDYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 671 The following BLAST results are available for this feature:
BLAST of EWM29298.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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