EWM29298.1, cds1404 (CDS) Nannochloropsis gaditana

Overview
NameEWM29298.1
Unique Namecds1404
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:561880..562129 -
Alignment locationCM002457.1:561631..561757 -
Alignment locationCM002457.1:559464..561540 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29298.1
Productrrna methylase family
Orig transcript idgnl|cribi|Naga_100029g19.9555.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:561880..562129 -
CM002457.1supercontigCM002457.1:561631..561757 -
CM002457.1supercontigCM002457.1:559464..561540 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
GO:0003723RNA binding
GO:0008173RNA methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029028Alpha/beta_knot_MTases
IPR016024ARM-type_fold
IPR029026tRNA_m1G_MTases_N
IPR001537SpoU_MeTrfase
Homology
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|585111821|gb|EWM29298.1| (rrna methylase family [Nannochloropsis gaditana])

HSP 1 Score: 1678.69 bits (4346), Expect = 0.000e+0
Identity = 817/817 (100.00%), Postives = 817/817 (100.00%), Query Frame = 0
Query:    1 MRTVALLQSILGALSWYPGSDIFILVRERWADALLRDLFAATAKLTSRADGRGLFLSLVLDDIWRSLALLHRMHSSHSNNDSYGASIPVEMDFFFAAIETASRNSLPDILYSMNHYLLSYLFPSQNTLTAQDIVQIRQKRLKTIVMLVLRCVEECNYRRRVAQLAIDMVFSPLVLKDPAFCRGVDNHVRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRELADDVYQQSIDEGREFDFSAGNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYVGPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVPVHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLRDPLFEKISSSAGRWIKIEEVHEGRTRAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQHRGQADAKE 817
            MRTVALLQSILGALSWYPGSDIFILVRERWADALLRDLFAATAKLTSRADGRGLFLSLVLDDIWRSLALLHRMHSSHSNNDSYGASIPVEMDFFFAAIETASRNSLPDILYSMNHYLLSYLFPSQNTLTAQDIVQIRQKRLKTIVMLVLRCVEECNYRRRVAQLAIDMVFSPLVLKDPAFCRGVDNHVRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRELADDVYQQSIDEGREFDFSAGNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYVGPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVPVHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLRDPLFEKISSSAGRWIKIEEVHEGRTRAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQHRGQADAKE
Sbjct:    1 MRTVALLQSILGALSWYPGSDIFILVRERWADALLRDLFAATAKLTSRADGRGLFLSLVLDDIWRSLALLHRMHSSHSNNDSYGASIPVEMDFFFAAIETASRNSLPDILYSMNHYLLSYLFPSQNTLTAQDIVQIRQKRLKTIVMLVLRCVEECNYRRRVAQLAIDMVFSPLVLKDPAFCRGVDNHVRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRELADDVYQQSIDEGREFDFSAGNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYVGPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVPVHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLRDPLFEKISSSAGRWIKIEEVHEGRTRAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQHRGQADAKE 817          
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|301095544|ref|XP_002896872.1| (SpoU rRNA Methylase family [Phytophthora infestans T30-4] >gi|262108622|gb|EEY66674.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4])

HSP 1 Score: 279.641 bits (714), Expect = 1.431e-79
Identity = 208/651 (31.95%), Postives = 329/651 (50.54%), Query Frame = 0
Query:  188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVF--SALLPSQPLIQ--------STNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
            ++ +L   I  G+  R  +V     RL   W++    VS A  F  ELVELL+ +E L D+  Q + D G  F     +S   GN T  VT   K        +R+++L  + D+    ++S    ++   +L  RL +     + ++  +L+S  + +KLR+WQA+C++   V K  +  +   + TA     +PSVR+Y E+    +  KFP ++    L+  L D N+ P   ASL+L         S   V  KL    +    G LL+ +LPWL+  H  TR++AQ    YLL+++L   +    ++  +  G           +L GT R+L +++E   + ++      +       +L  +L    I E     +L+P    +     L+ AM  LY + + ++F       P T  E    ++ +S+               S   + Q+KI  + +    + LP+             + NAR    Q  +MCASL+++VPNLAGLARTCEIF   KLV+P++R+ + D  F  +S++A +W+ +EEV  +G   R  + R K+EGYTIV +EQT  S  L+   LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q 
Sbjct:   75 MKLWLAEFIRFGSRHRPNVVFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLATDAGAPFQGFQGYSPLDGNQTAAVTTHAKDR-----FVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKLNVTPEWQKQHMLNSDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKFPTEICSGVLLPMLGDANLMPQVGASLLL--------VSAYLVDTKLDDNSLDVDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHYLKQSSKDTPG---------LRFLEGTARYLSNNKECKRMLRRQARQLDEFHPDYESSLLGMLSSGFISE---FGELLPRDDALRFSEQLKTAMNELYAQYQLENF-------PPTPSEQKSSMEADSV---------------SGFLTVQRKIDTTALLLEDSALPAAMRADFDAARRGATLNARQRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 671          
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|566009850|gb|ETI32761.1| (hypothetical protein F443_20491 [Phytophthora parasitica P1569])

HSP 1 Score: 288.5 bits (737), Expect = 5.683e-79
Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query:  188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
            ++Y++   I  G+  R  ++     RL   W++    VS A  F  ELVELL+ +E L D+  Q ++D G  F     FS   G  T  +T   K        +R+++L  + D+    +++    ++ + +L+ RL +   A D ++  +L+S  + +KLR+WQA+C++   V+K  +  +   + TA     +PSVR+Y E+    +  KFP ++    L+  L D N+ P   ASL+L         S   V  KL    +    G LL+ +LPWL+  H  TR++AQ    YLL+++L   +         +  N+ PG +    +L GT R+L +++E   + ++      +       +L  +L    I E     +L+P    +     L+ AM  LY + + ++F    S   +       D    ++T +R +  DT   +  + +       +     A   +     + NAR    Q  +MCASL++++PNLAGLARTCEIF   KL++P++R+ + D  F  +S++A +W+ +EEV  +G   R  + R K+EGYTIV +EQT  S  L+   LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q 
Sbjct:  770 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1366          
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|970652235|gb|KUF90936.1| (methyltransferase TARBP1 [Phytophthora nicotianae])

HSP 1 Score: 288.5 bits (737), Expect = 6.046e-79
Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query:  188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
            ++Y++   I  G+  R  ++     RL   W++    VS A  F  ELVELL+ +E L D+  Q ++D G  F     FS   G  T  +T   K        +R+++L  + D+    +++    ++ + +L+ RL +   A D ++  +L+S  + +KLR+WQA+C++   V+K  +  +   + TA     +PSVR+Y E+    +  KFP ++    L+  L D N+ P   ASL+L         S   V  KL    +    G LL+ +LPWL+  H  TR++AQ    YLL+++L   +         +  N+ PG +    +L GT R+L +++E   + ++      +       +L  +L    I E     +L+P    +     L+ AM  LY + + ++F    S   +       D    ++T +R +  DT   +  + +       +     A   +     + NAR    Q  +MCASL++++PNLAGLARTCEIF   KL++P++R+ + D  F  +S++A +W+ +EEV  +G   R  + R K+EGYTIV +EQT  S  L+   LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q 
Sbjct:  726 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1322          
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|568035360|gb|ETM33005.1| (hypothetical protein L914_19708 [Phytophthora parasitica])

HSP 1 Score: 288.5 bits (737), Expect = 6.076e-79
Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query:  188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
            ++Y++   I  G+  R  ++     RL   W++    VS A  F  ELVELL+ +E L D+  Q ++D G  F     FS   G  T  +T   K        +R+++L  + D+    +++    ++ + +L+ RL +   A D ++  +L+S  + +KLR+WQA+C++   V+K  +  +   + TA     +PSVR+Y E+    +  KFP ++    L+  L D N+ P   ASL+L         S   V  KL    +    G LL+ +LPWL+  H  TR++AQ    YLL+++L   +         +  N+ PG +    +L GT R+L +++E   + ++      +       +L  +L    I E     +L+P    +     L+ AM  LY + + ++F    S   +       D    ++T +R +  DT   +  + +       +     A   +     + NAR    Q  +MCASL++++PNLAGLARTCEIF   KL++P++R+ + D  F  +S++A +W+ +EEV  +G   R  + R K+EGYTIV +EQT  S  L+   LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q 
Sbjct:  770 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1366          
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|567947318|gb|ETK73102.1| (hypothetical protein L915_19928 [Phytophthora parasitica])

HSP 1 Score: 288.5 bits (737), Expect = 6.312e-79
Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query:  188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
            ++Y++   I  G+  R  ++     RL   W++    VS A  F  ELVELL+ +E L D+  Q ++D G  F     FS   G  T  +T   K        +R+++L  + D+    +++    ++ + +L+ RL +   A D ++  +L+S  + +KLR+WQA+C++   V+K  +  +   + TA     +PSVR+Y E+    +  KFP ++    L+  L D N+ P   ASL+L         S   V  KL    +    G LL+ +LPWL+  H  TR++AQ    YLL+++L   +         +  N+ PG +    +L GT R+L +++E   + ++      +       +L  +L    I E     +L+P    +     L+ AM  LY + + ++F    S   +       D    ++T +R +  DT   +  + +       +     A   +     + NAR    Q  +MCASL++++PNLAGLARTCEIF   KL++P++R+ + D  F  +S++A +W+ +EEV  +G   R  + R K+EGYTIV +EQT  S  L+   LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q 
Sbjct:  770 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1366          
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|570937326|gb|ETP02583.1| (hypothetical protein F441_20374 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 288.115 bits (736), Expect = 7.201e-79
Identity = 204/641 (31.83%), Postives = 333/641 (51.95%), Query Frame = 0
Query:  188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
            ++Y++   I  G+  R  ++     RL   W++    VS A  F  ELVELL+ +E L D+  Q ++D G  F     FS   G  T  +T   K        +R+++L  + D+    +++    ++ + +L+ RL +   A D ++  +L+S  + +KLR+WQA+C++   V+K  +  +   + TA     +PSVR+Y E+    +  KFP ++    L+  L D N+ P   ASL+L         S   V  KL    +    G LL+ +LPWL+  H  TR++AQ    YLL+++L   +         +  N+ PG +    +L GT R+L +++E   + ++      +       +L  +L    I E     +L+P    +     L+ AM  LY + + ++F    S   +       D    ++T +R +  DT   +  + +       +     A   +     + NAR    Q  +MCASL++++PNLAGLARTCEIF   KL++P++R+ + D  F  +S++A +W+ +EEV  +G   R  + R K+EGYTIV +EQT  S  L+   LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q 
Sbjct:  742 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVAPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1338          
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|970655790|gb|KUF93897.1| (hypothetical protein AM588_10004286 [Phytophthora nicotianae])

HSP 1 Score: 286.96 bits (733), Expect = 1.176e-78
Identity = 203/641 (31.67%), Postives = 332/641 (51.79%), Query Frame = 0
Query:  188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVFSALLPSQPLIQSTNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
            ++Y++   I  G+  R  ++     RL   W++    VS A  F  ELVELL+ +E L D+  Q ++D G  F     FS   G  T  +T   K        +R+++L  + D+    +++    ++ + +L+ RL +     D ++  +L+S  + +KLR+WQA+C++   V+K  +  +   + TA     +PSVR+Y E+    +  KFP ++    L+  L D N+ P   ASL+L         S   V  KL    +    G LL+ +LPWL+  H  TR++AQ    YLL+++L   +         +  N+ PG +    +L GT R+L +++E   + ++      +       +L  +L    I E     +L+P    +     L+ AM  LY + + ++F    S   +       D    ++T +R +  DT   +  + +       +     A   +     + NAR    Q  +MCASL++++PNLAGLARTCEIF   KL++P++R+ + D  F  +S++A +W+ +EEV  +G   R  + R K+EGYTIV +EQT  S  L+   LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q 
Sbjct:  652 MKYWIAEFIRFGSKHRPNVIFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLTMDTGAPFQGFQGFSPLDGYQTAAITTHAKDR-----FVRLIMLSFLDDVAVDRSSTTEATQQLMNALLARLLQLNVTPDWQKQHMLNSDGFGKKLRSWQALCIVSTHVNKAQLTELIPTLQTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLQDANLMPQVGASLLL--------VSAYLVDSKLDDNSLDIDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIH-----QLKLSSNVTPGLR----FLEGTARYLSNNKECKRMLRRQARQLEEFHPDYESSLLGMLSSGFISE---FGELLPRDEALRFSEQLKTAMNELYAQYQLENFTPTPSQQKINAES---DSSNGTLTVQRKI--DTTALLLEDSA-------LPSAMRADFDAARRGVTLNARQRPRQPIIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNLRMTQQDVTFATVSATAHKWMPLEEVRPQGDDLRQALLRWKREGYTIVAVEQTASSVSLANYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1248          
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|301096904|ref|XP_002897548.1| (SpoU rRNA Methylase family [Phytophthora infestans T30-4] >gi|262107008|gb|EEY65060.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4])

HSP 1 Score: 277.33 bits (708), Expect = 1.338e-78
Identity = 208/651 (31.95%), Postives = 328/651 (50.38%), Query Frame = 0
Query:  188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD-FSA-----GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFP-DVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVF--SALLPSQPLIQ--------STNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
            ++ +L   I  G+  R  +V     RL   W++    VS A  F  ELVELL+ +E L D+  Q + D G  F  F       GN TT VT   K        +R+++L  + D+    ++S    ++   +L  RL +     + ++  +L+S  + +KLR+WQA+C++   V K  +  +   + TA     +PSVR+Y E+    +  KFP ++    L+  L D N+ P   ASL+L         S   V  KL    +    G LL+ +LPWL+  H  TR++AQ    YLL+++L   +    ++  +  G           +L GT R+L +++E   + ++      +       +L  +L    I E     +L+P    +     L+ AM  L  + + ++F       P T  E    ++ +S+               S   + Q+KI  + +    + LP+             + NAR    Q  +MCASL+++VPNLAGLARTCEIF   KLV+P++R+ + D  F  +S++A +W+ +EEV  +G   R  + R K+EGYTIV +EQT  S  L+   LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q 
Sbjct:   75 MKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLATDAGAPFQGFQGYSPLDGNQTTAVTTHAKDR-----FVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKLNVTPEWQKQHMLNSDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKFPTEICSGVLLPMLGDANLMPQVGASLLL--------VSAYLVDTKLDDNSLDVDCGELLETMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHYLKQSSKDTPG---------LRFLEGTARYLSNNKECKRMLRRQARQLDEFHPDYESSLLGMLSSGFISE---FGELLPRDDALRFSEQLKTAMNELNAQYQLENF-------PPTPSEQKSSMEADSV---------------SGFLTVQRKIDTTALLLEDSALPAAMRADFDAARRGATLNARQRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 671          
BLAST of EWM29298.1 vs. NCBI_GenBank
Match: gi|301096892|ref|XP_002897542.1| (SpoU rRNA Methylase family [Phytophthora infestans T30-4] >gi|262107002|gb|EEY65054.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4])

HSP 1 Score: 277.33 bits (708), Expect = 1.352e-78
Identity = 205/650 (31.54%), Postives = 328/650 (50.46%), Query Frame = 0
Query:  188 VRYFLNRLINLGTVKRGYLVLDATARLVSIWKSDFQAVSLAGEFSKELVELLVLRE-LADDVYQQSIDEGREFD----FSA--GNHTTGVTKQQKREGQPCILLRILLLGCICDLFRMNNTSEAGQKEFLMSLMIRLFETAAAVDLRRAQILSSPDYSRKLRAWQAICVLIPFVDKEHVEAIQELIVTAMRTVAVPSVRFYQEIVLSYLCQKFPDVAIPFLMRNLSDLNVPPLTSASLVLSAGLACLTTSPVFVGGKLPQEYV----GPLLQVILPWLSGQHANTRIVAQLLSFYLLSRLLGGDMDINTEALANIGGNLPPGEKINYMYLSGTLRFLRDHREMAGLRQKTMLHFRKLSVAETCTLRYLLEQQRIMEGDSVSDLVP----VHIETALRDAMTLLYRELEAKHFMTYTSMAPLTKGENLFDIDQNSITFERVVSADTGGAVSSNCSSFQKKISVSDVF--SALLPSQPLIQ--------STNARGVQLQEFVMCASLLERVPNLAGLARTCEIFAVSKLVIPDMRLLR-DPLFEKISSSAGRWIKIEEVH-EGRT-RAYIQRCKQEGYTIVGLEQTDDSFCLSGVVLPRKMVLLVGREKEGIPVPLLQELDLVVQIPQLGLVRSLNVHVSASLIVWEHYKQH 809
            ++ +L   I  G+  R  +V     RL   W++    VS A  F  ELVELL+ +E L D+  Q + D G  F     +S   GN T  VT   K        +R+++L  + D+    ++S    ++   +L  RL +     + ++  +L+S  + +KLR+WQA+C++   V K  +  +   + TA     +PSVR+Y E+    +  KFP           S +++P L  A+L+   G + L  S   V  KL    +    G LL+++LPWL+  H  TR++AQ    YLL+++L   +    ++  +  G           +L GT R+L +++E   + ++      +       +L  +L    I E     +L+P    +     L+ AM  LY + + ++F       P T  E    ++ +S+               S   + Q+KI  + +    + LP+             + NAR    Q  +MCASL+++VPNLAGLARTCEIF   KLV+P++R+ + D  F  +S++A +W+ +EEV  +G   R  + R K+E YTIV +EQT  S  L+   LPRKMVL++GREKEGIPV +LQ +D+ V+IPQ GLVRSLNVHVS +L++WE+ +Q 
Sbjct:   75 MKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRA--HPVS-ALSFVDELVELLLYKEPLIDEKEQLATDAGAPFQGFQGYSPLDGNQTAAVTTHAKDR-----FVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKLNVTPEWQKQHMLNSDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKFP-------TEICSGVSLPMLGDANLMPQVGASLLLVSAYLVDTKLDDNSLDVDCGELLEIMLPWLNTSHGYTRVLAQ----YLLAKVLPRHIHYLKQSSKDTPG---------LRFLEGTARYLSNNKECKRMLRRQARQLDEFHPDYESSLLGMLSSGFISE---FGELLPRDDALRFSEQLKTAMNELYAQYQLENF-------PPTPSEQKSSMETDSV---------------SGILTVQRKIDTTALLLVDSALPAAMRADFDAARRGATLNARQRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKREDYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 671          
The following BLAST results are available for this feature:
BLAST of EWM29298.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111821|gb|EWM29298.1|0.000e+0100.00rrna methylase family [Nannochloropsis gaditana][more]
gi|301095544|ref|XP_002896872.1|1.431e-7931.95SpoU rRNA Methylase family [Phytophthora infestans... [more]
gi|566009850|gb|ETI32761.1|5.683e-7931.83hypothetical protein F443_20491 [Phytophthora para... [more]
gi|970652235|gb|KUF90936.1|6.046e-7931.83methyltransferase TARBP1 [Phytophthora nicotianae][more]
gi|568035360|gb|ETM33005.1|6.076e-7931.83hypothetical protein L914_19708 [Phytophthora para... [more]
gi|567947318|gb|ETK73102.1|6.312e-7931.83hypothetical protein L915_19928 [Phytophthora para... [more]
gi|570937326|gb|ETP02583.1|7.201e-7931.83hypothetical protein F441_20374 [Phytophthora para... [more]
gi|970655790|gb|KUF93897.1|1.176e-7831.67hypothetical protein AM588_10004286 [Phytophthora ... [more]
gi|301096904|ref|XP_002897548.1|1.338e-7831.95SpoU rRNA Methylase family [Phytophthora infestans... [more]
gi|301096892|ref|XP_002897542.1|1.352e-7831.54SpoU rRNA Methylase family [Phytophthora infestans... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1406rna1406Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications