EWM29258.1, cds1401 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|585111781|gb|EWM29258.1| (mitochondrial carrier [Nannochloropsis gaditana]) HSP 1 Score: 908.672 bits (2347), Expect = 0.000e+0 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0 Query: 1 MWEGQTLEPPWDGRLPIISHEYRARGLFFSFLSRPHITLNTTDEYTVAAGSPQLFLEAYTGFSRAVFFFPPSFARTMTMTGLHRPLLLLIVLALYALENQVRALPAAPAKSLKVIPAPSARKADVTHKLNTIDMMIAGGVATAIGDLAMHPIDTIKTVQQAAPAGLSIFKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYESAVQAHLSRPQAQYCHQIRMKVVRCKGLAGHYSVLAMGIDHMLRDIRRR 441 MWEGQTLEPPWDGRLPIISHEYRARGLFFSFLSRPHITLNTTDEYTVAAGSPQLFLEAYTGFSRAVFFFPPSFARTMTMTGLHRPLLLLIVLALYALENQVRALPAAPAKSLKVIPAPSARKADVTHKLNTIDMMIAGGVATAIGDLAMHPIDTIKTVQQAAPAGLSIFKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYESAVQAHLSRPQAQYCHQIRMKVVRCKGLAGHYSVLAMGIDHMLRDIRRR Sbjct: 1 MWEGQTLEPPWDGRLPIISHEYRARGLFFSFLSRPHITLNTTDEYTVAAGSPQLFLEAYTGFSRAVFFFPPSFARTMTMTGLHRPLLLLIVLALYALENQVRALPAAPAKSLKVIPAPSARKADVTHKLNTIDMMIAGGVATAIGDLAMHPIDTIKTVQQAAPAGLSIFKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYESAVQAHLSRPQAQYCHQIRMKVVRCKGLAGHYSVLAMGIDHMLRDIRRR 441
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|551634646|ref|XP_005820164.1| (hypothetical protein GUITHDRAFT_120626 [Guillardia theta CCMP2712] >gi|428164147|gb|EKX33184.1| hypothetical protein GUITHDRAFT_120626 [Guillardia theta CCMP2712]) HSP 1 Score: 247.669 bits (631), Expect = 1.776e-75 Identity = 139/264 (52.65%), Postives = 185/264 (70.08%), Query Frame = 0 Query: 136 IAGGVATAIGDLAMHPIDTIKTVQQAAPAGLS---IFKACSKILKEMGPIG-FYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKRE--ELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMT-GTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYE 392 IAGG+ATA+GDLA+HPIDTIKTVQQ+A AG IF ACSKI++E G +G FYAGV PY T D L+G +KFA YE K + + L ++HF+ AA AF++CSVV+VPGEL+KQ+LQAG+ ++ + K G GFF GYKAT++RDVPYTMLELGLY+N K+LI +RK+E + +++ AAA GG+ G +TNPLD++KTR+MT G+ VV + K +G +F +GS ARV WL+PFT I+L Y+ Sbjct: 38 IAGGIATAVGDLALHPIDTIKTVQQSAAAGSPSASIFGACSKIMREGGGLGGFYAGVGPYVTFDSLAGCVKFAAYEVCKTIADQHVDENLKPFTHFLSAAVAFIACSVVLVPGELMKQQLQAGMYRSVRACAAGILKKNGPRGFFQGYKATVVRDVPYTMLELGLYDNIKSLISHFRKKEGNANSKVDDVLAAAAVGGITGWITNPLDIIKTRMMTSGSAAPRVKTVVMDIIKKDGP-RTFFAGSIARVSWLMPFTAIYLPTYD 300
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|544214078|ref|XP_005537186.1| (similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D] >gi|449017748|dbj|BAM81150.1| similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 210.69 bits (535), Expect = 9.341e-61 Identity = 125/295 (42.37%), Postives = 174/295 (58.98%), Query Frame = 0 Query: 124 DVTHKLNTIDMMIAGGVATAIGDLAMHPIDTIKTVQQ---AAPAGLS------IFKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKK-LVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMTG--TQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYESAVQAHLSRPQAQY 406 D L + ++AGG AT MHP+DTIK Q A AG S + A +IL + GP GFYAG+ + +GAIKFATYE K+ V LP+A + AA AFL+CSVV+VPGE+VK RLQAG+ P+ + + ++ + +G+ G + GY AT+ RDVPYTMLE GLYE FK KR+ L + EE + GG+ G T PLD++KT+LMT +QY G++D + ++ E G+S F +G ARVLWL+PFT + G++E ++ L + QY Sbjct: 3 DEKGDLCLWEHLVAGGGATLSAVSVMHPLDTIKIYMQRAQVATAGGSANVRPTMLGAAQEILAQRGPGGFYAGLGANLSGQVPAGAIKFATYELLKQHAVQKRLPAAAQGWGEVASAALAFLACSVVLVPGEVVKSRLQAGLYPSFREALLRIIEQDGVSGLYRGYWATVTRDVPYTMLEFGLYEQFKRACMWSVKRDRLHSSEEWTMGGLAGGVTGWCTTPLDVIKTKLMTCARSQYRGYWDAARDVWHRE-GLSGFFTGGLARVLWLVPFTAVFFGSHE-IIKRFLRSRKRQY 295
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|545703752|ref|XP_005704201.1| (mitochondrial carrier (BOU / S-adenosylmethionine carrier) [Galdieria sulphuraria] >gi|452820641|gb|EME27681.1| mitochondrial carrier (BOU / S-adenosylmethionine carrier) [Galdieria sulphuraria]) HSP 1 Score: 203.371 bits (516), Expect = 3.845e-58 Identity = 112/312 (35.90%), Postives = 167/312 (53.53%), Query Frame = 0 Query: 133 DMMIAGGVATAIGDLAMHPIDTIKTVQQAAPAGLSIFKA-----------------CSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYESAVQAHL-----------SRPQAQYCHQIRMKVVR 416 D + AG +AT+ MHP+DTIKT+ Q + FKA ++ ++ G GFY G+ +GAIKFA Y K+ V ++ F CAA AF++CSVV+VPGE+VKQRLQ+G+ +M G+ + W+ G+ GF+ GY ATL+RD+PYTMLE GLYE FK L + K++ L + E + GG G LT P D++KT LMTG G + + + + + G+S G RVLWL+PFT + G +E++ +A + +R +C ++++ R Sbjct: 12 DHLFAGAIATSAAVSTMHPMDTIKTILQHSQGKNPSFKADLSVDSVLHSRSSALTVAGQLFRKRGISGFYQGLGANVGAQTPAGAIKFAVYGILKQKSERVFDPKWRSFVEFGCAALAFIACSVVLVPGEVVKQRLQSGMYSSMRAGVVETWRARGISGFYAGYGATLLRDIPYTMLEFGLYEQFKRLFRGSYKKDILPPHIEWFLGGLAGGCTGFLTTPFDVLKTHLMTGQHSQGIWPLFHNIVQRD-GLSGLFCGGLTRVLWLIPFTAVFFGVHEASKRAMIGLKRHRLFSIHTRSVVGFCQPMKLRKRR 322
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|1210530061|dbj|GAX11319.1| (hypothetical protein FisN_15Lh249 [Fistulifera solaris]) HSP 1 Score: 197.208 bits (500), Expect = 1.206e-55 Identity = 118/309 (38.19%), Postives = 174/309 (56.31%), Query Frame = 0 Query: 108 PAKSLKVIPAPSARKADVTHKLNT--------IDMMIAGGVATAIGDLAMHPIDTIKTVQQAA---PAGL--SIFKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYESAVQAHLSRPQ 403 P S V +R + VT + T + + +AG V T + D+ +HP+D IKT+QQ+ GL ++ A + G GFY G + YA D L+GA KFAT+EW K+ +PS + FV A AFLS S+ +VPGELVKQ+LQ G+ P+ ++ + G+ GFFVGY AT RDVPYTMLELG+YE L+KK E+ +T E+GAA++TG + LT P+D +KT+LMT + ++D ++ G+ SG AR+ W++PF I+L Y++ + + R + Sbjct: 41 PELSSVVTSRKRSRDSKVTQEGATAFVPTVPLVQLALAGAVTTFVADVMIHPMDCIKTLQQSDLGWELGLHKNVGDAAQYLWATSGLSGFYHGFLVYAGSDALAGAAKFATWEWWKR----AMPSTVL----FVGAGIAFLSSSLFLVPGELVKQQLQMGLYPDFSAAVQGIAGMAGVEGFFVGYDATCYRDVPYTMLELGVYE----LLKKAFDNEKKSTLREVGAASITGAIAAFLTTPMDTIKTKLMTSEETYNYWDCAMHTLESH-GVEGLFSGMEARISWIVPFVCIYLPLYDNIKRLLIQRHE 336
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|1210528573|dbj|GAX12770.1| (hypothetical protein FisN_15Hh249 [Fistulifera solaris]) HSP 1 Score: 194.126 bits (492), Expect = 1.746e-54 Identity = 110/275 (40.00%), Postives = 161/275 (58.55%), Query Frame = 0 Query: 132 IDMMIAGGVATAIGDLAMHPIDTIKTVQQAA---PAGL--SIFKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYESAVQAHLSR 401 + + +AG V T + D+ +HP+D IKT+QQ+ GL S+ A + G GFY G + YA D L+GA KFAT+EW K+ +PS + FV A AFLS S+ +VPGELVKQ+LQ G+ P+ ++ + + G+ GF VGY AT RDVPYTMLELG+YE L+KK E +T E+GAA++TG + LT P+D +KT+LM + ++D ++ G+ SG AR+ W++PF I+L Y++ + + R Sbjct: 73 VQLALAGAVTTFVADVMIHPMDCIKTLQQSDLGWELGLHNSLGDAAQYLWTTSGLAGFYHGFLVYAGSDALAGAAKFATWEWWKR----NMPSTIL----FVGAGIAFLSSSLFLVPGELVKQQLQMGLYPDFSAAVQGIAGSAGVEGFLVGYDATCYRDVPYTMLELGVYE----LLKKAFDNESKSTLREVGAASITGAIAAFLTTPMDTIKTKLMLSEESCNYWDCAMNTLESH-GVEGLFSGMEARISWIVPFVCIYLPLYDNIKRLLIQR 334
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|219130665|ref|XP_002185480.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403011|gb|EEC42967.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 157.532 bits (397), Expect = 4.805e-40 Identity = 103/278 (37.05%), Postives = 155/278 (55.76%), Query Frame = 0 Query: 134 MMIAGGVATAIGDLAMHPIDTIKTVQQA-APAGLSIFKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYE-WGKKLVAPV------------LPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREE---LTTYEELGAAAVTGGLVGLLTNPLDLVKTRLMTGTQYTG--FFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYE 392 + +AG +AT + D HP+D IKT+QQ+ A GLS+ A S + G + FY G + Y D + GAIKF +E W + + + V L + AA A ++ SVV VPGE VKQ+LQ G ++ + ++ ++ T GLPGFF GY + RD+P+TMLELGLY+ FK ++++ R + +E++ AAA TG + ++T PLD +KT+LM Y G FFD + + G+ S +G AR+ W+ P T I+L Y+ Sbjct: 104 LALAGSLATLLADSLTHPVDCIKTIQQSDAGMGLSLVAAASYLWSSAGIVAFYQGFLTYGCTDAVGGAIKFTVFESWNRAIASSVGADRRNESLRDRLDTIPPVLIRAAGAAMALIASSVVTVPGEFVKQQLQVGHYSSLSEALQSVYLTSGLPGFFHGYDGVVYRDIPFTMLELGLYDAFKNMVRQTRSSTDPGPPAAWEDVVAAAATGCVAAVVTTPLDTIKTKLMV-DDYGGASFFDCFASTVE-QHGVWSLFAGLLARIAWIGPSTAIYLPTYD 379
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|729468188|ref|XP_010526619.1| (PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial [Tarenaya hassleriana] >gi|729468191|ref|XP_010526620.1| PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial [Tarenaya hassleriana]) HSP 1 Score: 148.288 bits (373), Expect = 2.371e-37 Identity = 99/275 (36.00%), Postives = 142/275 (51.64%), Query Frame = 0 Query: 135 MIAGGVATAIGDLAMHPIDTIKTVQQAAPAGLSIFKACSKILKEM--GPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLM---TGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYESAVQAHLSRPQA 404 +IAGG A + + A++PIDTIKT QAA G I +LK + G G AGV+P + A+ YE K+ + P L+A +H A + S++ VP E+VKQR+Q G + D ++ + EG G + GY + L+RD+P+ ++ +YE + K+ +R EL E A G L G +T PLD++KTRLM + QY G FD VQ + K EG S+F+ G RVLW+ I G ES +A R A Sbjct: 57 VIAGGTAGVVVETALYPIDTIKTRLQAARGGGKI------VLKGLYSGLAGNIAGVLP-------ASALFVGVYEPTKQKLLKTFPEHLNAVAHLTAGAIGGFAASLIRVPTEVVKQRMQTGQFTSAPDAVRLIASKEGFRGLYAGYGSFLLRDLPFDAIQFCIYEQLRLGYKRAAQR-ELNDPENAVIGAFAGALTGAITTPLDVIKTRLMVQGSTKQYRGIFDCVQTIAKEEGA-SAFLKGIGPRVLWIGIGGSIFFGVLESTKRALAQRRSA 316
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|595464841|gb|EXX64885.1| (Pet8p [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 145.206 bits (365), Expect = 1.006e-36 Identity = 90/275 (32.73%), Postives = 142/275 (51.64%), Query Frame = 0 Query: 127 HKLNTIDMMIAGGVATAIGDLAMHPIDTIKTVQQAAPAGLSIFKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALH-AYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLM------TGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYESA 394 + N ++AGG+A D+A+ P+DT+KT Q+ S FKA G G Y+G+ + F TYE+ KK + + P + + + H + A+G ++C +V VP E+VKQR+QA +K ++ EGL GF+ GY +T+IR++P+T + LYE K ++ K R + +E +V GG G +T PLD++KTR+M T Y+G + ++ E G+ + SG RV+W+ I LG YE A Sbjct: 6 YNFNMKQALVAGGIAGTAVDVALFPLDTLKTRLQSK----SGFKASG------GFRGIYSGLTSAVIGSSPGASAFFVTYEYMKKKLGSIFPDSKYLPFIHMIAASGGEVAC-IVRVPTEVVKQRMQAKQYSTTSSALKTIFNQEGLNGFYRGYFSTVIREIPFTCFQFPLYEYLKIVVAKKTDRNYIEPWEAAICGSVAGGTAGAVTTPLDVIKTRIMLSAKGQTIHNYSGTINTFNRILHEE-GVKALFSGIGPRVIWISIGGSIFLGVYEKA 268
BLAST of EWM29258.1 vs. NCBI_GenBank
Match: gi|694372854|ref|XP_009363686.1| (PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like [Pyrus x bretschneideri] >gi|694372857|ref|XP_009363687.1| PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like [Pyrus x bretschneideri]) HSP 1 Score: 146.362 bits (368), Expect = 1.215e-36 Identity = 98/262 (37.40%), Postives = 135/262 (51.53%), Query Frame = 0 Query: 135 MIAGGVATAIGDLAMHPIDTIKTVQQAAPAGLSI-FKACSKILKEMGPIGFYAGVVPYATMDGLSGAIKFATYEWGKKLVAPVLPSALHAYSHFVCAAGAFLSCSVVMVPGELVKQRLQAGVVPNMVDGIKQMWKTEGLPGFFVGYKATLIRDVPYTMLELGLYENFKTLIKKYRKREELTTYEELGAAAVTGGLVGLLTNPLDLVKTRLM---TGTQYTGFFDVVQKMYKTEGGISSFMSGSSARVLWLLPFTVIHLGAYE 392 +IAGG A + + A++PIDTIKT QAA G I FK G G AGV+P + AI YE KK + + P L A +HF A ++ S+V VP E+VKQR+Q G + ++ + EG GF+ GY + L+RD+P+ ++ LYE + KK KR EL E A G + G +T PLD++KTRLM + QY G D VQ + + E G S+ + G RVLW+ I G E Sbjct: 57 VIAGGTAGVVVETALYPIDTIKTRLQAARGGGKIAFKGLYS-----GLTGNLAGVLP-------ASAIFVGVYEPAKKKLLKIFPENLSALAHFTAGAFGGIAASLVRVPTEVVKQRMQTGQFTSASVAVRHIAFKEGFKGFYAGYGSFLLRDLPFDAIQFCLYEQLRLGYKKAAKR-ELNDPENAIIGAFAGAVTGAITTPLDVIKTRLMVQGSANQYKGIIDCVQTVVREE-GRSALLKGIGPRVLWIGIGGSIFFGVLE 304 The following BLAST results are available for this feature:
BLAST of EWM29258.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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