EWM29276.1, cds1382 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|585111799|gb|EWM29276.1| (gc-rich sequence dna-binding factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 1696.79 bits (4393), Expect = 0.000e+0 Identity = 841/841 (100.00%), Postives = 841/841 (100.00%), Query Frame = 0
Query: 1 MSHLEHISAGNCRLLRFLLWLNGFDTAQMKASAFLSFADDVEDDEDGNSGGLKTLKSKKKNKKAFASKKSLQRALEEHLDEKAAVDGIASANQAGGVSYSGGGGEYSKEKLAELKKVQNFQVSIKASRTTEAKARVAFEVPEDTDGEKEDAEGVDTEDYDVHSAQLEQLKKGKRRRGMLGSGNGLGAEEGMDFISLEASGEGGTMSWSGKGAARRLDAISEADPRIDKDWESEVIRRGVRTGRGETSDGRSMALEGRGARDLSLTASLSSMALPSKGLKDSEFKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPALVVRGDGVRLLGMGRLLDKLETRELAGPLSSTVKRVRLGFGNAIKTTQKVK 841
MSHLEHISAGNCRLLRFLLWLNGFDTAQMKASAFLSFADDVEDDEDGNSGGLKTLKSKKKNKKAFASKKSLQRALEEHLDEKAAVDGIASANQAGGVSYSGGGGEYSKEKLAELKKVQNFQVSIKASRTTEAKARVAFEVPEDTDGEKEDAEGVDTEDYDVHSAQLEQLKKGKRRRGMLGSGNGLGAEEGMDFISLEASGEGGTMSWSGKGAARRLDAISEADPRIDKDWESEVIRRGVRTGRGETSDGRSMALEGRGARDLSLTASLSSMALPSKGLKDSEFKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPALVVRGDGVRLLGMGRLLDKLETRELAGPLSSTVKRVRLGFGNAIKTTQKVK
Sbjct: 1 MSHLEHISAGNCRLLRFLLWLNGFDTAQMKASAFLSFADDVEDDEDGNSGGLKTLKSKKKNKKAFASKKSLQRALEEHLDEKAAVDGIASANQAGGVSYSGGGGEYSKEKLAELKKVQNFQVSIKASRTTEAKARVAFEVPEDTDGEKEDAEGVDTEDYDVHSAQLEQLKKGKRRRGMLGSGNGLGAEEGMDFISLEASGEGGTMSWSGKGAARRLDAISEADPRIDKDWESEVIRRGVRTGRGETSDGRSMALEGRGARDLSLTASLSSMALPSKGLKDSEFKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPALVVRGDGVRLLGMGRLLDKLETRELAGPLSSTVKRVRLGFGNAIKTTQKVK 841
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|585111800|gb|EWM29277.1| (gc-rich sequence dna-binding factor 1 [Nannochloropsis gaditana]) HSP 1 Score: 1276.92 bits (3303), Expect = 0.000e+0 Identity = 632/636 (99.37%), Postives = 634/636 (99.69%), Query Frame = 0
Query: 206 SWSGKGAARRLDAISEADPRIDKDWESEVIRRGVRTGRGETSDGRSMALEGRGARDLSLTASLSSMALPSKGLKDSEFKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPALVVRGDGVRLLGMGRLLDKLETRELAGPLSSTVKRVRLGFGNAIKTTQKVK 841
S + +GAARRLDAISEADPRIDKDWESEVIRRGVRTGRGETSDGRSMALEGRGARDLSLTASLSSMALPSKGLKDSEFKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPALVVRGDGVRLLGMGRLLDKLETRELAGPLSSTVKRVRLGFGNAIKTTQKVK
Sbjct: 16 SLAPQGAARRLDAISEADPRIDKDWESEVIRRGVRTGRGETSDGRSMALEGRGARDLSLTASLSSMALPSKGLKDSEFKSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPALVVRGDGVRLLGMGRLLDKLETRELAGPLSSTVKRVRLGFGNAIKTTQKVK 651
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|1109277977|ref|XP_019163208.1| (PREDICTED: transcriptional repressor ILP1 [Ipomoea nil] >gi|1109277980|ref|XP_019163209.1| PREDICTED: transcriptional repressor ILP1 [Ipomoea nil] >gi|1109277982|ref|XP_019163210.1| PREDICTED: transcriptional repressor ILP1 [Ipomoea nil] >gi|1109277984|ref|XP_019163211.1| PREDICTED: transcriptional repressor ILP1 [Ipomoea nil] >gi|1109277986|ref|XP_019163212.1| PREDICTED: transcriptional repressor ILP1 [Ipomoea nil]) HSP 1 Score: 212.231 bits (539), Expect = 1.091e-53 Identity = 169/552 (30.62%), Postives = 256/552 (46.38%), Query Frame = 0
Query: 293 MRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHH---DLDEFGRDASGKMSKDRRRRE--RRGRLASV----LERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEP-GKHALESLLRAPFSRLEKAITKLCLPLLG-------PEAG-ISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTL--EALMIATPPALVVRGDGVRLLGMGRLLDK--------LETRELA 816
M R++ESH R + KT ++S + ++ ++ + Q++R F+S +C L+EK + ELE M +L + E + RR D ED + E E S A + S +G + ++A KE+ + A LDEFGRD + + D RRE R R A + I + + + E E++ G SDSE R+ + +LL+ A IF D DE+ L VV +FE WK+ + Y AY+P+++P +L PYVR+E++ W+PL ED D K W LF YG + + + +D D L+PQLVEK+A+ L L C+D S RET+ A+SAI + Y P AL L+ +RL A+ KL +P P A I+ + F ++++L RN+C W+ VLA L L L LL GK+ L N + I + V + G +++ P L D LL + R+L+K LET +LA
Sbjct: 405 MHENACRIKESHGRTVASLSKTEENLSSSLSNVTTLENSLAAAGEKYIFMQNLRDFVSVICSFLQEKAPYIEELEDQMQKLHKARAEAILERRAADNEDEMREL------EDAISAAKQVFSERGSSAATIVAAKEAALRAAAEARRLRDLPVKLDEFGRDLNQQKRMDMARREKAREHRRAKSDTKRMSTIKNDSSYQRVEGESSTDG---SDSESTAYRSNRDQLLQVAEEIFSDTNDEYSQLAVVVDKFERWKKGYSSSYRDAYMPLSIPGILSPYVRLELLKWDPL-----HEDADFMDMK-----------WHSLLFNYGLPEHDS---EFSSDDADANLIPQLVEKLAIPILHNHLAHCWDMLSTRETKYAVSAINLVFRYVPLSSSALGDLVAVLRNRLADAVAKLVVPKWDSILMKAVPNAARIAAYRFG-----MSVRLMRNICLWNNVLAMPVLEKLALDELLSGKILPHLRNIQSDIDDAITRTERIVASLYGVWAGPSVIGNHSPKLQPLVD--YLLALSRMLEKKHLSTGAELETGKLA 921
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|1104511522|ref|XP_019073049.1| (PREDICTED: transcriptional repressor ILP1 [Vitis vinifera]) HSP 1 Score: 200.675 bits (509), Expect = 6.842e-50 Identity = 159/542 (29.34%), Postives = 258/542 (47.60%), Query Frame = 0
Query: 299 RLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGK--MSKDRR---RRERRGRL-ASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGS--APKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPG-KHALESLLRAPFSRLEKAITKLCLP---LLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPALVVRGDGVRLL--GMGRLLDKLETRELAGPLSSTVKRV 826
RL+ESH R + +T ++S + ++K +F + Q +R F+S +C L+ K + ELE M +L E + RR D ++ +E D +++G ++ A A ++ + +P LDE+GRD + + M K+RR R+ +R R A + + + + K E E S +ESDSE ++ + LL+ A IF D A+E+ L AV +R E WK+++ Y AY+ +++P + PYVR+E++ W+PL E+ D + W LF YG E+G+ +P +D D LVP+LVE+VA+ L L C+D FS RET+ A+SA ++ Y P AL LL RL KA+T +P +L +A + + ++++L RN+C W +LA L LVL LL G++ +EN + I + + + G + A P R + ++ L + RL +LE R L G S R+
Sbjct: 397 RLKESHGRTMSSLTRTDENLSSSLSNITTLEKSLTAAGEKFIFMQMLRDFVSVICDFLQHKAPFIEELEEQMQKLHEERASAILERRAADNDEMMEIQASVDAAMSVFTKSGSNEAMVAAARTAAQAASAAMREQTNLPV----KLDEYGRDINLQKCMDKNRRSEARQRKRDRWDAKRMTFLENESSHQKIEGE---SSTDESDSETTAYQSNRDLLLQTAEQIFGDAAEEYSQLSAVKERIERWKKQYSSSYRDAYMSLSVPAIFSPYVRLELLKWDPL-----YEEAD-----------FDDMKWHSLLFNYG-LSEDGNDFSP----DDADANLVPELVERVALPILHHELAHCWDIFSTRETKNAVSATNLVIRYIPASSEALGELLAVVHKRLYKALTNFMVPPWNILVMKAVPNAARVAAYRFGMSIRLMRNICLWKDILALPVLEKLVLDQLLSGQVLPHIENIASDVHDAITRTERIISSLSG-----VWAGPSVTGERSNKLQPLVDYVLRLGKRLEKRHLPGVTESDTSRL 905
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|567912373|ref|XP_006448500.1| (hypothetical protein CICLE_v10014191mg [Citrus clementina] >gi|557551111|gb|ESR61740.1| hypothetical protein CICLE_v10014191mg [Citrus clementina]) HSP 1 Score: 200.29 bits (508), Expect = 7.928e-50 Identity = 165/595 (27.73%), Postives = 270/595 (45.38%), Query Frame = 0
Query: 226 IDKD--WESEVIRRGVRTGRGETSDGRSMALEGRGARDLSLTASLSSMALP---------------SKGLKDSEF-KSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKES--------LSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRR-----ERRGRL-ASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGE-----DPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEP-GKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIF---VALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGT 779
+D+D WE E +R+G+ G+ D S+ + + +++ + P S+GL + E+ + +++ +RL+ESH R + +KT +++S + ++ RF + Q +R ++S +C L++K + LEA M +L +E + RR D +D + E E A + + +G + + A + + + +P LDEFGRD + + +D RR RR R L ++ K E E+T +ESDSE E ++ + +LL+ A IF D A+E+ L V +RFE WKR + Y AY+ ++ P ++ PYVR+E++ W+PL ED D + K W LF YG PK +GE D D LVP LVEKVA+ L + C+D S RET+ +SA ++ Y P AL+ LL A +RL +A+ + +P P A ++ R + V+++L RN+C W +V A L L L LL K+ + + N I + V + G
Sbjct: 286 VDEDVMWEEEQVRKGL----GKRIDDSSVRVGANTSSSVAMPQQQQQFSYPTTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGERFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEV------EAAIKAATLFIGDRGNSASKLTAASSAAQAAAAAAIKEQTNLPV----KLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGEST---TDESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLH-----EDADFSEMK-----------WHNLLFNYG-------LPK-DGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNVVSATILVMAYVPTSSEALKDLLVAIHTRLAEAVANIAVPTWSPLAMSAVPNSARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGV 839
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|1111147720|ref|XP_019256871.1| (PREDICTED: transcriptional repressor ILP1 [Nicotiana attenuata] >gi|1102139394|gb|OIS95808.1| hypothetical protein A4A49_16755 [Nicotiana attenuata]) HSP 1 Score: 199.904 bits (507), Expect = 9.388e-50 Identity = 153/528 (28.98%), Postives = 244/528 (46.21%), Query Frame = 0
Query: 299 RLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALE--TDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRRERRGRLASV------LERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEP-GKHALESLLRAPFSRLEKAITKLCLPLLG-------PEAG-ISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPALVVRGDGVRLLGMGRLLDK 809
RL+ESH R + KT +++ + ++ ++ + Q +R F+S +C L++K + ELE M +L E E + RR D +D + E LE + Q S+ G + A A S+ KG +P +LDEFGRD + + D RR +L V + I + K E E+T +ESDSE + + +LL+ A IF D +E+ L VV++F+ WK+ + Y AY+ +++P + PYVR+E++ W+PL E+ D W LF YG + E +D D L+PQLVEK+AV L L C+D S ET+ A+SA++ +L Y P AL +L+ RL A+ L +P P+A ++ + F ++++L RN+C +H++ A L LVL L GK+ L + N + + V V G + + +R LL +GR+L+K
Sbjct: 367 RLKESHGRTVASLNKTEENLSASLSNVTTLENSLSAAGEKYMFMQKLRDFVSVICTLLQDKAPYIEELEDQMQKLHEERAEATLERRAADNDDEMRE-LEAAVNAARQVLSKGGSNAATIEAATAAAQAATASMRKGGDLPA----ELDEFGRDVNLQKRMDTTRRAEARKLRRVRNDVKRMSAIERDSSYHKIEGEST---TDESDSESTAYESNRDQLLQVAEQIFGDAHEEYSQLSLVVEKFDRWKKDYASSYRDAYMSLSIPAIFSPYVRLELLKWDPL-----HENAD-----------FMDMNWHSLLFNYGLPEGESEI---STDDADANLIPQLVEKLAVPILHNQLANCWDMLSTSETECAVSAMKLVLRYGPFSGSALSNLVAVLRDRLADAVANLKVPTWDTLLMRAVPDAARVAAYRFG-----MSIRLMRNICLFHEIFAMPVLEELVLDQLFSGKILPHLRSIQSNIHDAVTRTERVVASVRGVWAGPKVTGDCSPKLRPLVDYLLKLGRVLEK 862
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|568828706|ref|XP_006468681.1| (PREDICTED: PAX3- and PAX7-binding protein 1 [Citrus sinensis]) HSP 1 Score: 198.749 bits (504), Expect = 3.171e-49 Identity = 169/597 (28.31%), Postives = 273/597 (45.73%), Query Frame = 0
Query: 226 IDKD--WESEVIRRG---------VRTGRGETSDGRSMALEGRGARDLSLTASLSSMALPS--------KGLKDSEF-KSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKES--------LSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRR-----ERRGRL-ASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGE-----DPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEP-GKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIF---VALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGT 779
+D+D WE E +R+G VR G TS +M + + + S + +PS +GL + E+ + +++ +RL+ESH R + +KT +++S + ++ +F + Q +R ++S +C L++K + LEA M +L +E + RR D +D + E E A +++ +G + +IA + + + +P LDEFGRD + + +D RR RR R L ++ K E E+T +ESDSE E ++ + +LL+ A IF D A+E+ L V +RFE WKR + Y AY+ ++ P ++ PYVR+E++ W+PL ED D + K W LF YG PK +GE D D LVP LVEKVA+ L + C+D S RET+ A+SA ++ Y P AL+ LL A +RL +A+ + +P A ++ R + V+++L RN+C W +V A L L L LL K+ + + N I + V + G
Sbjct: 286 VDEDVMWEEEQVRKGLGKRIDDGSVRVG-ANTSSSVAMPQQQQ-----QFSYSTTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEV------EAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPV----KLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGEST---TDESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLH-----EDADFSEMK-----------WHNLLFNYG-------LPK-DGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTRLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGV 839
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|1130857952|dbj|GAV62367.1| (GCFC domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 196.438 bits (498), Expect = 1.621e-48 Identity = 151/495 (30.51%), Postives = 237/495 (47.88%), Query Frame = 0
Query: 299 RLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQS--SQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRDAS--GKMSKDRR---RRERRGRLASV-LERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGS--APKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIY-EPGKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIF---VALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGT 779
RL+ESHD+ + KT ++S + ++K +F + Q +R ++S +C L+ K + ELE M +L E + RR D +D + E +E+ K S ++ G ++ A A S+ + +P LDEFGRD + +MS RR R+ R+ R S L + K E E S +ESD + ++ + LL+ A IF D DE+ L + +RFE WKR + YH AY+ ++ P + PYVR+E++ W+PL +D D K W LF YGQ QE+GS +P +D D L+P+LVE+VA+ L + C+D FS RET+ A+SA + Y +P AL LL A +RL A+T +P P ++ R + ++++L RN+C W +++A L LVL LL K+ + + N + + V + G
Sbjct: 377 RLKESHDKTISSLTKTDENLSSSLLNITALEKSLSAAGEKFIFMQKLRDYVSVMCEFLQHKAPFIEELEEQMQKLREERASAILERRAADNDDEMME-VESAVKAAMSVFNECGSSTAMIAVAASAAQAASVSIREQTNLPVM----LDEFGRDMNLQKRMSMTRRAEARQYRKVRFDSKRLASMEIDESYRKVEGE---SSTDESDGDSSAYQSNRDLLLQTADQIFSDALDEYSQLSVIKERFERWKRDYSSSYHDAYMSLSAPAIFSPYVRLELLKWDPLH-----DDADFFDMK-----------WHSLLFNYGQ-QEDGSDFSP----DDADANLIPRLVERVALPILHHEIVHCWDIFSTRETKNAVSATSLVTNYIKPSSEALAELLVAIRTRLSDAVTNTIVPSWSPLVLKAVPNAARVAAYRFGMSVRLMRNICLWKEIMALPVLEKLVLDDLLCEKVLPHVRSIASNVHDAVTRTERIVAALSGV 842
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|641858323|gb|KDO77045.1| (hypothetical protein CISIN_1g002517mg [Citrus sinensis]) HSP 1 Score: 195.282 bits (495), Expect = 3.478e-48 Identity = 168/597 (28.14%), Postives = 272/597 (45.56%), Query Frame = 0
Query: 226 IDKD--WESEVIRRG---------VRTGRGETSDGRSMALEGRGARDLSLTASLSSMALPS--------KGLKDSEF-KSVETVLADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKES--------LSKGAGVPGPAHHDLDEFGRDASGKMSKDRRRR-----ERRGRL-ASVLERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGE-----DPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEP-GKHALESLLRAPFSRLEKAITKLCLPLLGPEAGISLWEFQRRQIF---VALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGT 779
+D+D WE E +R+G VR G TS +M + + + S + +PS +GL + E+ + +++ +RL+ESH R + +KT +++S + ++ +F + Q +R ++S +C L++K + LEA M +L +E + RR D +D + E E A +++ +G + +IA + + + +P LDEFGRD + + +D RR RR R L ++ K E E+T +ESDSE E ++ + +LL+ A IF D A+E+ L V +RFE WKR + Y AY+ ++ P ++ PYVR+E++ W+PL ED D + K W LF YG PK +GE D D LVP LVEKVA+ L + C+D S RET+ A+SA ++ Y P AL+ LL A + L +A+ + +P A ++ R + V+++L RN+C W +V A L L L LL K+ + + N I + V + G
Sbjct: 286 VDEDVMWEEEQVRKGLGKRIDDGSVRVG-ANTSSSVAMPQQQQ-----QFSYSTTVTPIPSIGGAIGASQGLDTMSIAQKAESAMKALQTNVNRLKESHARTMSSLKKTDEDLSSSLLKITDLESSLSAAGEKFIFMQKLRDYVSVICDFLQDKAPYIETLEAEMQKLNKERASAILERRAADNDDEMTEV------EAAIKAATLVIGDRGNSASKLIAASSAAQAAAAAAVKEQTNLPV----KLDEFGRDMNLQKRRDMERRAESRQHRRTRFDLKQLSSMDADISSQKLEGEST---TDESDSETEAYQSNREELLKTAEHIFSDAAEEYSQLSVVKERFEKWKRDYSSSYRDAYMSLSTPAIMSPYVRLELLKWDPLH-----EDADFSEMK-----------WHNLLFNYG-------LPK-DGEDFAHDDADANLVPTLVEKVALPILHHDIAYCWDMLSTRETKNAVSATILVMAYVPTSSEALKDLLVAIHTCLAEAVANIAVPTWSSLAMSAVPNAARIAAYRFGVSVRLMRNICLWKEVFALPILEKLALDELLCRKVLPHVRSIASNVHDAISRTERIVASLSGV 839
BLAST of EWM29276.1 vs. NCBI_GenBank
Match: gi|743868789|ref|XP_011033095.1| (PREDICTED: PAX3- and PAX7-binding protein 1 isoform X1 [Populus euphratica]) HSP 1 Score: 192.586 bits (488), Expect = 4.294e-47 Identity = 154/500 (30.80%), Postives = 232/500 (46.40%), Query Frame = 0
Query: 299 RLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETDGKEQQSSQAGMLLSLQGYAPEVV-------IALKESLSKGAGVPGPAHHDLDEFGRDAS--GKMSKDRR---RRERRGRLASV-LERINDGTGGDKAEAEATFSGAEESDSEVETLRTRQAK---LLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYDPFSERETQRAISAIQGLLIYEPG-KHALESLLRAPFSRLEKAITKLCLP---LLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIG 778
RL+ESH R + KT +++ + ++K +F + Q +R F+S +C L+ K ++ ELE M +L E + RR D ED + E E A + S +G + + A +L A +P LDEFGRD + +M ++R R+ R+ R S L + + K E E + +ESDS+ E Q+ LL A IF D ++E+ L V +RFE WK+++ Y AY+ ++ P + PYVR+E++ WNPL ED D K W LF YG E+GS +D D LVP LVEK+A+ L + C+D S RET+ AISA ++ Y P AL LL A +RL A+ + +P LL +A S + + V+++L RN+C W +LA L LVL LL GK+ + + N + + V + G
Sbjct: 430 RLKESHGRTTSLLSKTDENLSASLMNVTALEKSISAAGEKFIFMQKLRDFVSVICEFLQHKATLIEELEERMQKLHEEQASLILERRTADNEDEMMEV------EAAVKAAMSVFSARGNSAATIDAAKSAAAAALVALKDQANLPV----KLDEFGRDINLQKRMDMEKRAKARQRRKARFDSKRLSYMEVDSSDQKIEGELS---TDESDSDSEKNAAYQSTRDLLLRTAEEIFSDASEEYSQLSVVKERFETWKKEYFASYRDAYMSLSAPAIFSPYVRLELLKWNPLH-----EDADFFDMK-----------WHSLLFNYG-LPEDGS--DLNPDDVDANLVPGLVEKIAIPILHHEIAHCWDMLSTRETKNAISATSLVINYVPATSEALSELLAAIRTRLADAVASIVVPTWSLLVLKAVPSAAQVAAYRFGVSVRLMRNICLWKDILALPVLEKLVLDELLCGKVLPHVRSIASNVHDAVTRTERIVASLSG 897 The following BLAST results are available for this feature:
BLAST of EWM29276.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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