EWM29313.1, cds1374 (CDS) Nannochloropsis gaditana

Overview
NameEWM29313.1
Unique Namecds1374
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:473684..476354 -
Alignment locationCM002457.1:473582..473604 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29313.1
ProductDNA recombination/repair BRCA2 like protein
Orig transcript idgnl|cribi|Naga_100152g15.731.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:473684..476354 -
CM002457.1supercontigCM002457.1:473582..473604 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006281DNA repair
GO:0000724double-strand break repair via homologous recombination
Vocabulary: INTERPRO
TermDefinition
IPR015525BRCA2
IPR015187BRCA2_OB_1
IPR015252BRCA2_hlx
IPR012340NA-bd_OB-fold
Homology
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|585111837|gb|EWM29313.1| (DNA recombination/repair BRCA2 like protein [Nannochloropsis gaditana])

HSP 1 Score: 1857.03 bits (4809), Expect = 0.000e+0
Identity = 897/897 (100.00%), Postives = 897/897 (100.00%), Query Frame = 0
Query:    1 MVLESTSSSDIEGVFRVAGGSSSSLGMIKAVFGLVSPFLSVEDSGSFVQGACLSANSLNVFMMGRKEDHGNTSEPPTRMGVSNRPSKSHTKVESEINQGFHAAAYEAIPNISVAAQEKVLSVSQFEIPEDGEKSLQTTHTFDQVALQDVKKYLASRKGDPRCQGAVLSTDCLFSEGTEEVQGGKAEIKQGIDHSFLREGDEQFWESARDKSAGMITERALVREIACTTSNSNNIEGRVVESIDSVRDLSQGDICPPSAEEHLKLLRPPTQCKDIALLDLRALALDKLRQMQKDCDRNAGWNEKGGGQNIQGGHGNYARLNLCDLGVYPGSVAAHLLSSYGVKQATLALTSTNGHNLRFSKEESGFPLVMEDALNVTAGTLEERPATSCRRRQALLPPDECARWIRDVTANPVCRDLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSEREWETGKTREMLHTEICSRVEEARNEVLKDPSCHRESKPFFRVKICSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGRHVMLYGITAPPNKSDGPAPSLFRLYATGKSTKVVPLSSYSGKDAISLAMC 897
            MVLESTSSSDIEGVFRVAGGSSSSLGMIKAVFGLVSPFLSVEDSGSFVQGACLSANSLNVFMMGRKEDHGNTSEPPTRMGVSNRPSKSHTKVESEINQGFHAAAYEAIPNISVAAQEKVLSVSQFEIPEDGEKSLQTTHTFDQVALQDVKKYLASRKGDPRCQGAVLSTDCLFSEGTEEVQGGKAEIKQGIDHSFLREGDEQFWESARDKSAGMITERALVREIACTTSNSNNIEGRVVESIDSVRDLSQGDICPPSAEEHLKLLRPPTQCKDIALLDLRALALDKLRQMQKDCDRNAGWNEKGGGQNIQGGHGNYARLNLCDLGVYPGSVAAHLLSSYGVKQATLALTSTNGHNLRFSKEESGFPLVMEDALNVTAGTLEERPATSCRRRQALLPPDECARWIRDVTANPVCRDLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSEREWETGKTREMLHTEICSRVEEARNEVLKDPSCHRESKPFFRVKICSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGRHVMLYGITAPPNKSDGPAPSLFRLYATGKSTKVVPLSSYSGKDAISLAMC
Sbjct:    1 MVLESTSSSDIEGVFRVAGGSSSSLGMIKAVFGLVSPFLSVEDSGSFVQGACLSANSLNVFMMGRKEDHGNTSEPPTRMGVSNRPSKSHTKVESEINQGFHAAAYEAIPNISVAAQEKVLSVSQFEIPEDGEKSLQTTHTFDQVALQDVKKYLASRKGDPRCQGAVLSTDCLFSEGTEEVQGGKAEIKQGIDHSFLREGDEQFWESARDKSAGMITERALVREIACTTSNSNNIEGRVVESIDSVRDLSQGDICPPSAEEHLKLLRPPTQCKDIALLDLRALALDKLRQMQKDCDRNAGWNEKGGGQNIQGGHGNYARLNLCDLGVYPGSVAAHLLSSYGVKQATLALTSTNGHNLRFSKEESGFPLVMEDALNVTAGTLEERPATSCRRRQALLPPDECARWIRDVTANPVCRDLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSEREWETGKTREMLHTEICSRVEEARNEVLKDPSCHRESKPFFRVKICSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGRHVMLYGITAPPNKSDGPAPSLFRLYATGKSTKVVPLSSYSGKDAISLAMC 897          
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|553188374|ref|XP_005854784.1| (breast cancer 2 susceptibility protein [Nannochloropsis gaditana CCMP526] >gi|422294273|gb|EKU21573.1| breast cancer 2 susceptibility protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0
Identity = 324/327 (99.08%), Postives = 324/327 (99.08%), Query Frame = 0
Query:  415 DLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTT 741
            DLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQ   T
Sbjct:    2 DLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQALLT 328          
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|919056437|ref|XP_013410020.1| (PREDICTED: breast cancer type 2 susceptibility protein homolog isoform X3 [Lingula anatina])

HSP 1 Score: 181.415 bits (459), Expect = 8.321e-43
Identity = 160/558 (28.67%), Postives = 239/558 (42.83%), Query Frame = 0
Query:  336 LSSYGVKQATLALTSTNGHNLRFSKEESGFPLVMEDALNVTAGTLEERPATSCRRRQALLPPDECARWIRDVTANPVCRDLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSER--EWETGK---------------TREMLHTEIC------------------SRVEEARNEVLKDPSCHRESKPFFRVKI--CSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGRHVMLYGITA 856
            L   GV  +TL ++++N     F  +E   P ++        G      AT     Q     DE  R   D+          +     S+ WV +HY  IVWK+A +E AFP+  GGR LT  RV+ QL+YR  RE+    RSA++ I   D +  + MILCVS+V          L N S+       QT    +E E E  + A          +  +ELTDGWY + A LD  L+  +R+G++RVG K+ +CGA L G S     PLE     A     L++  N TRPARWDA LGF R P           +  L   GG    ++ VV R Y  Q+ME+  N        R+     EE   ++ E   Q RMER+L       E ++ ++  +R+  +  L   +     TGK                 E+   +IC                  ++V +A  +   + S  R   P  +V++  CS         ++ VD+         ++F         LTVW PS+E+ + LQ+G+ + +Y ++A
Sbjct: 3239 LYGLGVLPSTLKVSASNAEEFHFLPKEHFLPSILSSGEGYKVGD----GATLILDDQGCAGKDEFYRAFLDMPG--------VDPRLVSQDWVYNHYRWIVWKMAAMEVAFPQQFGGRCLTPHRVMLQLKYRYDREVDASQRSAVKKITERDDTPAKTMILCVSRV----------LTNKSIE---TGGQTHSRGKEGEKEAPKMA--------VENATVELTDGWYPIRAQLDPALTKLLRSGKLRVGQKLCVCGAELVG-SQDACLPLE-----APTDLLLKVSGNSTRPARWDAILGFHRSPH-----PFPVPLGSLFPDGGMVGCVDVVVTRVYPIQYMEKLPNGSNVFRCGRM-----EERESKKFEQTRQERMERLLARIQADVELKSSDKSTKRKRRSVKLTHVQISNLTTGKEIYDAIQNAPDPTSIEMELSEAQICALNEHRCRLQMDQQAEVQAQVRKALQDTENEQSSMRNVTPLLKVRVAGCS---------NSDVDAG-------MNTF---------LTVWRPSDEVIQMLQEGKRLKIYNLSA 3722          
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|919056433|ref|XP_013410018.1| (PREDICTED: breast cancer type 2 susceptibility protein homolog isoform X1 [Lingula anatina])

HSP 1 Score: 181.415 bits (459), Expect = 9.008e-43
Identity = 160/558 (28.67%), Postives = 239/558 (42.83%), Query Frame = 0
Query:  336 LSSYGVKQATLALTSTNGHNLRFSKEESGFPLVMEDALNVTAGTLEERPATSCRRRQALLPPDECARWIRDVTANPVCRDLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSER--EWETGK---------------TREMLHTEIC------------------SRVEEARNEVLKDPSCHRESKPFFRVKI--CSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGRHVMLYGITA 856
            L   GV  +TL ++++N     F  +E   P ++        G      AT     Q     DE  R   D+          +     S+ WV +HY  IVWK+A +E AFP+  GGR LT  RV+ QL+YR  RE+    RSA++ I   D +  + MILCVS+V          L N S+       QT    +E E E  + A          +  +ELTDGWY + A LD  L+  +R+G++RVG K+ +CGA L G S     PLE     A     L++  N TRPARWDA LGF R P           +  L   GG    ++ VV R Y  Q+ME+  N        R+     EE   ++ E   Q RMER+L       E ++ ++  +R+  +  L   +     TGK                 E+   +IC                  ++V +A  +   + S  R   P  +V++  CS         ++ VD+         ++F         LTVW PS+E+ + LQ+G+ + +Y ++A
Sbjct: 3239 LYGLGVLPSTLKVSASNAEEFHFLPKEHFLPSILSSGEGYKVGD----GATLILDDQGCAGKDEFYRAFLDMPG--------VDPRLVSQDWVYNHYRWIVWKMAAMEVAFPQQFGGRCLTPHRVMLQLKYRYDREVDASQRSAVKKITERDDTPAKTMILCVSRV----------LTNKSIE---TGGQTHSRGKEGEKEAPKMA--------VENATVELTDGWYPIRAQLDPALTKLLRSGKLRVGQKLCVCGAELVG-SQDACLPLE-----APTDLLLKVSGNSTRPARWDAILGFHRSPH-----PFPVPLGSLFPDGGMVGCVDVVVTRVYPIQYMEKLPNGSNVFRCGRM-----EERESKKFEQTRQERMERLLARIQADVELKSSDKSTKRKRRSVKLTHVQISNLTTGKEIYDAIQNAPDPTSIEMELSEAQICALNEHRCRLQMDQQAEVQAQVRKALQDTENEQSSMRNVTPLLKVRVAGCS---------NSDVDAG-------MNTF---------LTVWRPSDEVIQMLQEGKRLKIYNLSA 3722          
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|919056435|ref|XP_013410019.1| (PREDICTED: breast cancer type 2 susceptibility protein homolog isoform X2 [Lingula anatina])

HSP 1 Score: 181.03 bits (458), Expect = 9.247e-43
Identity = 160/558 (28.67%), Postives = 239/558 (42.83%), Query Frame = 0
Query:  336 LSSYGVKQATLALTSTNGHNLRFSKEESGFPLVMEDALNVTAGTLEERPATSCRRRQALLPPDECARWIRDVTANPVCRDLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSER--EWETGK---------------TREMLHTEIC------------------SRVEEARNEVLKDPSCHRESKPFFRVKI--CSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGRHVMLYGITA 856
            L   GV  +TL ++++N     F  +E   P ++        G      AT     Q     DE  R   D+          +     S+ WV +HY  IVWK+A +E AFP+  GGR LT  RV+ QL+YR  RE+    RSA++ I   D +  + MILCVS+V          L N S+       QT    +E E E  + A          +  +ELTDGWY + A LD  L+  +R+G++RVG K+ +CGA L G S     PLE     A     L++  N TRPARWDA LGF R P           +  L   GG    ++ VV R Y  Q+ME+  N        R+     EE   ++ E   Q RMER+L       E ++ ++  +R+  +  L   +     TGK                 E+   +IC                  ++V +A  +   + S  R   P  +V++  CS         ++ VD+         ++F         LTVW PS+E+ + LQ+G+ + +Y ++A
Sbjct: 3237 LYGLGVLPSTLKVSASNAEEFHFLPKEHFLPSILSSGEGYKVGD----GATLILDDQGCAGKDEFYRAFLDMPG--------VDPRLVSQDWVYNHYRWIVWKMAAMEVAFPQQFGGRCLTPHRVMLQLKYRYDREVDASQRSAVKKITERDDTPAKTMILCVSRV----------LTNKSIE---TGGQTHSRGKEGEKEAPKMA--------VENATVELTDGWYPIRAQLDPALTKLLRSGKLRVGQKLCVCGAELVG-SQDACLPLE-----APTDLLLKVSGNSTRPARWDAILGFHRSPH-----PFPVPLGSLFPDGGMVGCVDVVVTRVYPIQYMEKLPNGSNVFRCGRM-----EERESKKFEQTRQERMERLLARIQADVELKSSDKSTKRKRRSVKLTHVQISNLTTGKEIYDAIQNAPDPTSIEMELSEAQICALNEHRCRLQMDQQAEVQAQVRKALQDTENEQSSMRNVTPLLKVRVAGCS---------NSDVDAG-------MNTF---------LTVWRPSDEVIQMLQEGKRLKIYNLSA 3720          
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|1126225461|ref|XP_019647132.1| (PREDICTED: uncharacterized protein LOC109487565 [Branchiostoma belcheri])

HSP 1 Score: 173.711 bits (439), Expect = 2.236e-40
Identity = 153/557 (27.47%), Postives = 237/557 (42.55%), Query Frame = 0
Query:  328 PGSVAAHLLSSYGVKQATLALTSTNGHNLRFSKEESGFPLVME--DALNVTAGTLEERPATSCRRRQALLPPDECARWIRDVTANPVCRDLQISLSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADD-AQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSEREWETGKTREMLHTEICSRVEEARNEVLKDPSCHRESKPFFRVKICSVKSRHSHLPSTSVDS------------YKLSDEFEC--------------HSFAKQRQNLALLTVWEPSEELEEALQDGRHVMLYGIT 855
            PGS     L SYGV Q+T  +T     + RF   +   P  ++  + + +T G               +L P E     +D   + +     +     +  W+ +HY  IVWKLA +E AFP   GGR LT  +VL QL+YR  RE+    RSAL+ IL  D +  + ++LCV+++   P          ++S   A EQ +   A  K+ E +                IELTDGWY + A LD  L+  V + RI VG K+ + GA L G S     PLE     A A   L+L  N TR ARWDA LGF   P          S+  L   GG    ++ +V+R Y  Q+ME+  +      +S V S   EE A ++HEG    RME++  +   + E        R  G  + +G  R+    KT ++ + +    + EA    +      +   P  R ++      + H  S   +              +L DE                 + +   R+    LTVW P++ + + L++GR + ++ ++
Sbjct: 2912 PGSYTTQELYSYGVHQSTCTVTCETAESFRFVCRDHVSPDTLDRGEGITLTDG--------------GVLVPLEDGTAGKDEFVSALLDTPGVDPGLVTPEWIHNHYRWIVWKLAAMEAAFPVQFGGRCLTPDQVLMQLKYRYDREVDLSQRSALKKILERDDTPSKTLVLCVARITCTP---------HTISQDCATEQDSKKVANTKQKETI----------------IELTDGWYGVRAALDPPLARLVESKRICVGQKLCVSGAELVG-SQDACSPLE-----APANLLLKLSANATRRARWDAKLGFHSNPQ-----PFPVSLGSLCVDGGMVGCVDVMVLRSYPMQYMEKYPSG-----SSVVRSRRAEEKAARKHEGDRNRRMEKLYSQIQDKFE-------RRTAGKGSSVGRRRKSLQLKTEDIENLQTGQEIYEALQGAMDPTEIEQCLSPAQRSRL------YDHQRSLQAEQQGELQAEFRRALQQLDDEIPVQRNVVAMYRVRLADYQYKGARKTELTLTVWRPTDNVMDMLKEGRRLKIFHLS 3400          
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|1137235620|gb|OMO97642.1| (hypothetical protein COLO4_14461 [Corchorus olitorius])

HSP 1 Score: 167.162 bits (422), Expect = 8.053e-39
Identity = 136/485 (28.04%), Postives = 217/485 (44.74%), Query Frame = 0
Query:  424 SEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLN----AEGERLASRVLSVAEEEDAQQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSEREWETGKTREMLHTEIC-----------SRVEEARN--------EVLKDPSCH-RESKPFFRVKICSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGRHVMLYGITAPPNKSDGPAPSLFRLYATGKSTKVVPLS 884
            S+ WVA+HY  IVWKL C ER +P    G++ T   VL++L+YR  RE+  GHRSA++ IL GDAS   +++LC+S          ++L+N+                  E ++ +    T     S + ++ELTDGWY ++AVLD  LS  + +G++ VG K+ I GA L G +G    P+  L+ S+D    L L INGT  A W   LGF      C       +   + + GG  P     V R Y   + ER  N       ER+ SR++         Q+H   C A ++ ++ E  +  +  + +        + G    R  ET    E+L  E+            S++E  R         + L +   + R+  PF RV++  + +R+ H                     K+     ++T+W P+E+ +  L +G+  ++ G+   P  SD     +  L A G +TK  PL+
Sbjct:  407 SKGWVANHYKWIVWKLMCYERRYPSKCSGKFFTISNVLEELKYRYEREVNLGHRSAIKRILEGDASPSTMIVLCIS----------AILSNS------------------EPKMEKNLGMTNAVDNSGNAKVELTDGWYSVNAVLDVLLSKQLSSGKLFVGQKLRIWGAGLSGWAG----PVSPLEASSDI--SLFLNINGTFRAHWADRLGF------CKSAGAPLAFRCIKSDGGPVPQTLVGVTRIYPVLYRERLSNGGSIVRSERMESRLV---------QQHNQRCSAVVDHVISEYQRGVDSIHND------SESEGAQILRILETAAEPEVLMAEMSPEQLTSFATYKSKLEATRQVEMEKSIEKALAEAGLNKRDVVPFMRVRVVGLTARNYH--------------------GKRSPKEGIITIWNPTEKQKNELVEGQAYVVAGLI--PMNSD---LEILYLQARGSTTKWQPLT 811          
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|1179576693|ref|XP_020673369.1| (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X2 [Dendrobium catenatum])

HSP 1 Score: 167.162 bits (422), Expect = 1.287e-38
Identity = 141/449 (31.40%), Postives = 196/449 (43.65%), Query Frame = 0
Query:  420 LSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLN----AEGERLASRVLS-------------VAEEEDA----QQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSEREWETGKTREMLHTEICSRVEEARNEVLKDPSCHRESKPFFRVKICSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGR 847
            L+  SE WV +HY  IVWKLACLER +P    G++LT   VL++L+YR  RE+  GHRSALR IL+GD S   +MILCVS +      +T                   D     S++ E      G      V+IELTDGWY LD  LD +LS  +  G++ VG K+ +CGA L G     V+P+  L+ S      L L ING   A W   LGF      C       +   +  GGG  P     ++R Y   + ER  +       E L  ++L              ++E EDA        EG   A++ RILE     AE E        +   T   S +E +    +  LH +I   +EEA           R+  PF RV++  +         T  DS K           K R    ++T+W P+E+ +  L +G+
Sbjct:  488 LADISEKWVVNHYKWIVWKLACLERCYPCEAIGKFLTVSNVLEELKYRYEREVNYGHRSALRKILDGDVSPSSMMILCVSAIRSHSGLRT-------------------DEVLGISDLHEYGNKVNGVGCKDAVKIELTDGWYSLDTTLDGYLSKLLLAGKLFVGQKIRVCGATLCGW----VEPISPLEASNSVS--LVLHINGAYRAHWADSLGF------CKGIGAPLAFRCIKGGGGKVPRTLVGIMRLYPILYKERLPDGGSIVRSENLEKKILQLNSRRRSDIAEDIISEFEDAPVNFNDNEEG---AKLFRILE---SSAETEVLMAGMSLE-QLTSFSSYQEKQEALRQADLHKKIEKALEEA-------GLGSRDVTPFMRVRVIGL---------TRTDSSK-----------KSRPREGMITIWNPTEKQKLELVEGQ 871          
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|1179576689|ref|XP_020673367.1| (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 [Dendrobium catenatum] >gi|1179576691|ref|XP_020673368.1| protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 [Dendrobium catenatum])

HSP 1 Score: 166.777 bits (421), Expect = 1.335e-38
Identity = 141/449 (31.40%), Postives = 196/449 (43.65%), Query Frame = 0
Query:  420 LSPPSEVWVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHRPIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLN----AEGERLASRVLS-------------VAEEEDA----QQRHEGVCQARMERILEEKTQQAEEENRERRHRRQGNTTGLGSEREWETGKTREMLHTEICSRVEEARNEVLKDPSCHRESKPFFRVKICSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGR 847
            L+  SE WV +HY  IVWKLACLER +P    G++LT   VL++L+YR  RE+  GHRSALR IL+GD S   +MILCVS +      +T                   D     S++ E      G      V+IELTDGWY LD  LD +LS  +  G++ VG K+ +CGA L G     V+P+  L+ S      L L ING   A W   LGF      C       +   +  GGG  P     ++R Y   + ER  +       E L  ++L              ++E EDA        EG   A++ RILE     AE E        +   T   S +E +    +  LH +I   +EEA           R+  PF RV++  +         T  DS K           K R    ++T+W P+E+ +  L +G+
Sbjct:  489 LADISEKWVVNHYKWIVWKLACLERCYPCEAIGKFLTVSNVLEELKYRYEREVNYGHRSALRKILDGDVSPSSMMILCVSAIRSHSGLRT-------------------DEVLGISDLHEYGNKVNGVGCKDAVKIELTDGWYSLDTTLDGYLSKLLLAGKLFVGQKIRVCGATLCGW----VEPISPLEASNSVS--LVLHINGAYRAHWADSLGF------CKGIGAPLAFRCIKGGGGKVPRTLVGIMRLYPILYKERLPDGGSIVRSENLEKKILQLNSRRRSDIAEDIISEFEDAPVNFNDNEEG---AKLFRILE---SSAETEVLMAGMSLE-QLTSFSSYQEKQEALRQADLHKKIEKALEEA-------GLGSRDVTPFMRVRVIGL---------TRTDSSK-----------KSRPREGMITIWNPTEKQKLELVEGQ 872          
BLAST of EWM29313.1 vs. NCBI_GenBank
Match: gi|508715186|gb|EOY07083.1| (BREAST CANCER 2 like 2A, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 167.162 bits (422), Expect = 1.391e-38
Identity = 143/484 (29.55%), Postives = 208/484 (42.98%), Query Frame = 0
Query:  427 WVAHHYGAIVWKLACLERAFPEVLGGRYLTRPRVLQQLRYRAYREMVCGHRSALRMILNGDASAGRLMILCVSQVYHR--PIFQTSLLNNASLSHTLADEQTADDAQEKESEILEQAESTGGTSPSTHVRIELTDGWYYLDAVLDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLD-----QSADARPCLQLVINGTRPARWDAPLGFQRRPSMCSRGVMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLN----AEGERLASRVL-------SVAEEEDAQQRHEGVCQARM--------ERILEEKTQQAEEENRERRHRRQGNTTGLGSEREWETGKTREMLHTEICSRVEEARNEVLKDPSCHRESKPFFRVKICSVKSRHSHLPSTSVDSYKLSDEFECHSFAKQRQNLALLTVWEPSEELEEALQDGRHVMLYGITAPPNKSDGPAPSLFRLYATGKSTKVVPLS 884
            WVA+HY  IVWKL C ER +P    G++LT   VL++L+YR  RE+   HRSA++ IL GDAS   +++LC+S +     P  +T+LL                               T G   S + ++ELTDGWY +DAVLD  LS  +  G++ VG K+ I GA L G   G V PLE+L      + A +   L L INGT  A W   LGF      C       +   + + GG  P     V R Y   + ER  N       ER+ SR++       SV  +    +   GV  + +         +IL+     AE E        +  T+    + + E  +  EM  +   +  E   NE        R+  PF RV++  + +R  H                     K R    ++T+W P+E+ +  L +G+  ++ G+   P  SD  A     L A G +TK  PLS
Sbjct:  569 WVANHYKWIVWKLVCYERCYPSKCAGKFLTISNVLEELKYRYDREVNHAHRSAIKRILEGDASPSTMLVLCISNIQSNSEPKMETNLL------------------------------ITNGADNSGNAKVELTDGWYSMDAVLDVLLSKQLAAGKLFVGQKLRIWGAGLCGWV-GPVSPLEVLADLKFFKEASSAISLLLNINGTFRAHWADRLGF------CKGVGTPLAFRCIKSDGGPVPWTLVGVTRIYPVLYRERLSNGGSIVRSERMESRMVQQHNQRGSVVVDHVISEYQRGVNSSHILSDSESEGAKILKILETAAEPEVLMAEMSPEQLTSFATYKSKLEATRQLEMEKSIKKALAEAGLNE--------RDVVPFIRVRVVGLTTRKYH--------------------GKGRPKEGIITIWNPTEKQKSELVEGQAYVVAGLI--PIYSDSEA---LYLQARGSTTKWQPLS 982          
The following BLAST results are available for this feature:
BLAST of EWM29313.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111837|gb|EWM29313.1|0.000e+0100.00DNA recombination/repair BRCA2 like protein [Nanno... [more]
gi|553188374|ref|XP_005854784.1|0.000e+099.08breast cancer 2 susceptibility protein [Nannochlor... [more]
gi|919056437|ref|XP_013410020.1|8.321e-4328.67PREDICTED: breast cancer type 2 susceptibility pro... [more]
gi|919056433|ref|XP_013410018.1|9.008e-4328.67PREDICTED: breast cancer type 2 susceptibility pro... [more]
gi|919056435|ref|XP_013410019.1|9.247e-4328.67PREDICTED: breast cancer type 2 susceptibility pro... [more]
gi|1126225461|ref|XP_019647132.1|2.236e-4027.47PREDICTED: uncharacterized protein LOC109487565 [B... [more]
gi|1137235620|gb|OMO97642.1|8.053e-3928.04hypothetical protein COLO4_14461 [Corchorus olitor... [more]
gi|1179576693|ref|XP_020673369.1|1.287e-3831.40protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-l... [more]
gi|1179576689|ref|XP_020673367.1|1.335e-3831.40protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-l... [more]
gi|508715186|gb|EOY07083.1|1.391e-3829.55BREAST CANCER 2 like 2A, putative isoform 1 [Theob... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1376rna1376Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications