EWM29308.1, cds1369 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|585111832|gb|EWM29308.1| (far upstream element binding protein 3 [Nannochloropsis gaditana]) HSP 1 Score: 1374.76 bits (3557), Expect = 0.000e+0 Identity = 687/687 (100.00%), Postives = 687/687 (100.00%), Query Frame = 0
Query: 1 MLAKGFPVVAVVVSSPDKGNGQMSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKEGVAEALQMIQGQSSEYGVAATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLMNEGCRDAHGNYIPYQPSPAFIVPVGPGGVPIMPGAAPPPPPQGGGYYPPPPGYQPQQPPPPGYPPPGYPQQPAQSDPYAAYYQQQQNQGPSPAQQQQQQQQQQQQPQHQPQHQPQPQQPQQQPAYASQTNGGDAAAAQQQQQQAAPAPAPTSSSDSASNGAVGGEAAYDPTQYWDQFWAYAVHYGEEYARKQYGTWAPPEGHGRHRGTGSDILELGDYKNGGNGRIIDHRNRVLQGSRGKCGEET 687
MLAKGFPVVAVVVSSPDKGNGQMSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKEGVAEALQMIQGQSSEYGVAATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLMNEGCRDAHGNYIPYQPSPAFIVPVGPGGVPIMPGAAPPPPPQGGGYYPPPPGYQPQQPPPPGYPPPGYPQQPAQSDPYAAYYQQQQNQGPSPAQQQQQQQQQQQQPQHQPQHQPQPQQPQQQPAYASQTNGGDAAAAQQQQQQAAPAPAPTSSSDSASNGAVGGEAAYDPTQYWDQFWAYAVHYGEEYARKQYGTWAPPEGHGRHRGTGSDILELGDYKNGGNGRIIDHRNRVLQGSRGKCGEET
Sbjct: 1 MLAKGFPVVAVVVSSPDKGNGQMSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKEGVAEALQMIQGQSSEYGVAATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLMNEGCRDAHGNYIPYQPSPAFIVPVGPGGVPIMPGAAPPPPPQGGGYYPPPPGYQPQQPPPPGYPPPGYPQQPAQSDPYAAYYQQQQNQGPSPAQQQQQQQQQQQQPQHQPQHQPQPQQPQQQPAYASQTNGGDAAAAQQQQQQAAPAPAPTSSSDSASNGAVGGEAAYDPTQYWDQFWAYAVHYGEEYARKQYGTWAPPEGHGRHRGTGSDILELGDYKNGGNGRIIDHRNRVLQGSRGKCGEET 687
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|553188383|ref|XP_005854787.1| (hypothetical protein NGA_0401010 [Nannochloropsis gaditana CCMP526] >gi|422294276|gb|EKU21576.1| hypothetical protein NGA_0401010 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1136.71 bits (2939), Expect = 0.000e+0 Identity = 585/649 (90.14%), Postives = 585/649 (90.14%), Query Frame = 0
Query: 23 MSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKEGVAEALQMIQGQ----------------------------SSEYGVAATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLMNEGCRDAHGNYIPYQPSPAFIVPVGPGGVPIMPGAAPPPPPQGGGYYPPPPGYQPQQPPPPGYPPPGYPQQPAQSDPYAAYYQQQQNQGPSPAQQQQQQQQQQQQPQHQPQHQPQPQQPQQQPAYASQTNGGDAAAAQQQQQQAAPAPAPTSSSDSASNGAVGGEAAYDPTQYWDQFWAYAVHYGEEYARKQYGTWAPPEG 643
MSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKEGVAEALQMIQGQ SSEYGVAATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVT GGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLMNEGCRDAHGNYIPYQPSPAFIVPVGPGGVPIMPGAAPPPPPQGGGYYPPPPGYQPQQPPPPGYPPPGYPQQPAQSDPYAAYYQQQQNQGPSPAQQQQQQQQQQQQPQHQPQHQPQPQQPQQQPAYASQTNGGDAAAAQQQQQQAAPAPAPTSSSDSASNGAVGGEAAYDPTQYWDQFWAYAVHYGEEYARKQYGTWAPPEG
Sbjct: 1 MSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKEGVAEALQMIQGQVDEAQAERSKPRAGTGGGGHYGGGGGGQSSEYGVAATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVT------------------------------------GGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLMNEGCRDAHGNYIPYQPSPAFIVPVGPGGVPIMPGAAPPPPPQGGGYYPPPPGYQPQQPPPPGYPPPGYPQQPAQSDPYAAYYQQQQNQGPSPAQQQQQQQQQQQQPQHQPQHQPQPQQPQQQPAYASQTNGGDAAAAQQQQQQAAPAPAPTSSSDSASNGAVGGEAAYDPTQYWDQFWAYAVHYGEEYARKQYGTWAPPEG 613
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|553188591|ref|XP_005854823.1| (hypothetical protein NGA_0401020, partial [Nannochloropsis gaditana CCMP526] >gi|422294235|gb|EKU21535.1| hypothetical protein NGA_0401020, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 541.191 bits (1393), Expect = 0.000e+0 Identity = 271/277 (97.83%), Postives = 273/277 (98.56%), Query Frame = 0
Query: 1 MLAKGFPVVAVVVSSPDKGNGQMSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKEGVAEALQMIQGQSSE 277
+ +GFPVVAVVVSSPDKGNGQMSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKEGVAEALQMIQGQ E
Sbjct: 17 LKGRGFPVVAVVVSSPDKGNGQMSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKEGVAEALQMIQGQVDE 293
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|1173935787|gb|OQR86849.1| (hypothetical protein ACHHYP_09835 [Achlya hypogyna]) HSP 1 Score: 265.388 bits (677), Expect = 6.455e-77 Identity = 175/434 (40.32%), Postives = 255/434 (58.76%), Query Frame = 0
Query: 28 DDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEP--RKREKIFIPKDN-PDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEP--QEDMHVLIEG-TEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPG-ENTRAVSVKG-PTKEGVAEAL-QMIQGQSSEYGV-------AATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGD-GPERARYEIETKLMNE 444
+D +A+A+AIAARL ++ + G ++ D + P RKR+K++IP D PD NF LLIGPRGS QKR+++ +G+RI IRG GS E P GEP EDMHVLI T+EQ+A A+ E+E ILF+P +AMRLK QLR +AE + G + HYGP LG G T M +P ++VGL+IGRGGE I+ + ++GC +QV++E + G N R V + G P++ VA + I G E G A L + VP++KVG IIGR G+T++ +Q+RTGAN+ +PS + P++R + ++ +A E AR EIQ L+ PQG + M + ++VG++IGR GA ++ IQ R + RIQ+P +P + P VR ++I GP + A+ EI+T L+N+
Sbjct: 4 NDPVAKARAIAARLGLTVPSDNSVLGKRKSRFDDDPLHPDGRKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDLSGSRILIRGR-GSVKE--PTGEPDENEDMHVLITADTDEQIAKAQAEIEDILFNPEKAMRLKQEQLRQVAE-----------NNGSMELTHYGP------LG-GGNSTTFSMSVPRAVVGLIIGRGGETIRDLQNRSGCSIQVAREDDGGPPNERLVQIVGSPSQVEVARTMINNILGDRIEGGRDRRGDPPADALKLVVPNEKVGFIIGRQGATVKGVQQRTGANIVVPSIPDSENPSLRTLIITGTS-EAKEAARVEIQMLV-------NDQHQLLPQGANTIYMQLPNERVGVVIGRQGANVRAIQDRHDCRIQIPNHPDPGSMPEVRTISISGPTTQAVQNAKDEIDTILIND 408
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|953492383|emb|CEG45223.1| (far upstream element binding protein 3 [Plasmopara halstedii]) HSP 1 Score: 266.544 bits (680), Expect = 1.764e-76 Identity = 174/455 (38.24%), Postives = 253/455 (55.60%), Query Frame = 0
Query: 29 DAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEP---------RKREKIFIPKDN-PDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEP--QEDMHVLIEG-TEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETE--PGENTRAVSVKGPTKEGVAEALQMIQG------QSSEYGV--------------------AATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLM 442
D +ARA+ IAARL A+ P G G ++ +G+ + +KR+K++IP D PD NF LLIGPRGS QKR+++ +GARI IRG SK P G+P E++HVLI T+E VA A+ VE ILF+P +AM+LK QLR +AEL G + S G E + + S + + DMK+P +VG +IGRGGE I+ + K+G +Q+ +E E P R V++ G +E +A A ++IQ Q+ GV ++ + VP+++VGLIIGRGG TI+ IQ+RTG +V IP P +RL+T+ +A E AR EIQ+L++ PG G A G+ + M + D+VG+IIG+ G IK IQ R RIQ+P A+P ++PPVR ++I GP A+ E++ ++
Sbjct: 3 DPVARAREIAARLAATAIPGGDVLGKRKSRWEGDVDTSGRLAPGLGAKKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSKD---PTGDPDENEELHVLITADTDESVAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNDTYS-----GHENYGSGLNSS----LNNDQSSFDMKVPRDLVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTADRFVNITG-NEETLANAQKLIQNLIDERQQNQTAGVFRERDDQDRMARYGGINPDGTESVEILVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDSTHPEMRLITIRGT-AEAKEAARFEIQSLVSEEPGQRYGYGTAA---GSTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADPGSNPPVRTISIQGPPQSLAIAKEEVDMVIL 440
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|325191228|emb|CCA26015.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 258.455 bits (659), Expect = 3.449e-74 Identity = 160/414 (38.65%), Postives = 235/414 (56.76%), Query Frame = 0
Query: 52 GGTKRRFGDGESEEPRKREKIFIPKDN-PDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQE--DMHVLIEG-TEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENT--RAVSVKGPTKEGVAEALQMIQ------------GQSSEYG-----VAATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLM 442
G K R+G + +KR+K++IP D PD NF LLIGPRGS QKR+++ +GA+I IRG SK GEP E D+HVLI +EE +A A+ +E+ILF+P +AM+LK QLR +AELKG A G + GHYGP G + M +P + VG +IGRGGE I+ + A++G +Q+ +E E T R VS+ G T+E V A ++IQ G + YG + TL + VP+D+VGL+IGRGG+TIR+IQ RTG N+ +P P +R +TV M+A + A++EI L+ G+ + M + D+VG++IG+ G IK IQ R R+Q+P + ++PPVR ++I G + +RA+ EI++ ++
Sbjct: 27 GKRKTRWGSEDPTAEKKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGAKILIRGKGSSKD---AFGEPDENDDLHVLITADSEEAIARAQASIEEILFNPQQAMKLKQEQLRKVAELKG-------AGVDGNEFGHYGP-------GSADGSQAYQMPVPRTYVGYIIGRGGETIRDLQARSGAHIQIVREEEGAAFTPDRFVSIAG-TEEAVESAKKLIQNLLDERASGGGSGDDARYGGSNPDGSETLEILVPNDRVGLVIGRGGATIRSIQVRTGTNITVPQTPDATNPTMRKITVKGT-MEAKDAAKNEILGLIQEN-----------NNTGSTIYMQVPNDRVGVVIGKKGETIKGIQDRNTVRVQIPQVPDVGSNPPVRTISIHGAPESLQRAKEEIDSVIL 410
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|566031368|gb|ETI54279.1| (hypothetical protein, variant 3 [Phytophthora parasitica P1569] >gi|568006295|gb|ETL80561.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568036144|gb|ETM33760.1| hypothetical protein, variant 3 [Phytophthora parasitica]) HSP 1 Score: 255.373 bits (651), Expect = 7.269e-73 Identity = 162/409 (39.61%), Postives = 234/409 (57.21%), Query Frame = 0
Query: 67 RKREKIFIPKDN-PDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEP--QEDMHVLIEG-TEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEG-HYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENT--RAVSVKGPTKEGVAEALQMIQGQSSE---------------------YGV-----AATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLM 442
+KR+K++IP D PD NF LLIGPRGS QKR+++ +GARI IRG SK P GEP E++HVLI T+E VA A+ VE ILF+P +AM+LK QLR +AEL G + + G + G HYGP G A+ + DMK+P +VG +IGRGGE I+ + K+G +Q+ +E E T R V++ G +E + A ++IQ E YG + ++ + VP+++VGLIIGRGG TI+ IQ+RTG +V IP + P+ RL+T+ M+A E A+ EIQ+L++ PG G + G + M + D+VG+IIG+ G IK IQ R RIQ+P A+ ++PPVR ++I GP A+ E++ ++
Sbjct: 4 KKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSKD---PTGEPDENEELHVLITADTDEAVAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNENYDSHAIGQNSGAHYGP-------GNDAQTSSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRYVNIAG-NQEALDLAQRLIQNLIDERQQNQSAGGFRERDDRDRMARYGGINPDGSDSVELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPDKRLITIRGT-MEAKEAAKFEIQSLVSEEPGQRHGYGMAS---GQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADEGSNPPVRTISIQGPPQNLAGAKEEVDMVIL 397
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|566031367|gb|ETI54278.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|568006294|gb|ETL80560.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568036143|gb|ETM33759.1| hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 255.373 bits (651), Expect = 7.489e-73 Identity = 162/409 (39.61%), Postives = 234/409 (57.21%), Query Frame = 0
Query: 67 RKREKIFIPKDN-PDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEP--QEDMHVLIEG-TEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEG-HYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENT--RAVSVKGPTKEGVAEALQMIQGQSSE---------------------YGV-----AATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLM 442
+KR+K++IP D PD NF LLIGPRGS QKR+++ +GARI IRG SK P GEP E++HVLI T+E VA A+ VE ILF+P +AM+LK QLR +AEL G + + G + G HYGP G A+ + DMK+P +VG +IGRGGE I+ + K+G +Q+ +E E T R V++ G +E + A ++IQ E YG + ++ + VP+++VGLIIGRGG TI+ IQ+RTG +V IP + P+ RL+T+ M+A E A+ EIQ+L++ PG G + G + M + D+VG+IIG+ G IK IQ R RIQ+P A+ ++PPVR ++I GP A+ E++ ++
Sbjct: 4 KKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSKD---PTGEPDENEELHVLITADTDEAVAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNENYDSHAIGQNSGAHYGP-------GNDAQTSSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRYVNIAG-NQEALDLAQRLIQNLIDERQQNQSAGGFRERDDRDRMARYGGINPDGSDSVELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPDKRLITIRGT-MEAKEAAKFEIQSLVSEEPGQRHGYGMAS---GQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADEGSNPPVRTISIQGPPQNLAGAKEEVDMVIL 397
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|675209865|ref|XP_008913817.1| (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|567976793|gb|ETL27308.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568086006|gb|ETN00903.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|970660271|gb|KUF97834.1| Far upstream element-binding protein 3 [Phytophthora nicotianae]) HSP 1 Score: 255.373 bits (651), Expect = 7.657e-73 Identity = 162/409 (39.61%), Postives = 234/409 (57.21%), Query Frame = 0
Query: 67 RKREKIFIPKDN-PDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEP--QEDMHVLIEG-TEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEG-HYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENT--RAVSVKGPTKEGVAEALQMIQGQSSE---------------------YGV-----AATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLM 442
+KR+K++IP D PD NF LLIGPRGS QKR+++ +GARI IRG SK P GEP E++HVLI T+E VA A+ VE ILF+P +AM+LK QLR +AEL G + + G + G HYGP G A+ + DMK+P +VG +IGRGGE I+ + K+G +Q+ +E E T R V++ G +E + A ++IQ E YG + ++ + VP+++VGLIIGRGG TI+ IQ+RTG +V IP + P+ RL+T+ M+A E A+ EIQ+L++ PG G + G + M + D+VG+IIG+ G IK IQ R RIQ+P A+ ++PPVR ++I GP A+ E++ ++
Sbjct: 4 KKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSKD---PTGEPDENEELHVLITADTDEAVAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNENYDSHAIGQNSGAHYGP-------GNDAQASSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRYVNIAG-NQEALDLAQRLIQNLIDERQQNQSAGGFRERDDRDRMARYGGINPDGSDSVELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPDKRLITIRGT-MEAKEAAKFEIQSLVSEEPGQRHGYGMAS---GQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADEGSNPPVRTISIQGPPQNLAGAKEEVDMVIL 397
BLAST of EWM29308.1 vs. NCBI_GenBank
Match: gi|567948117|gb|ETK73876.1| (hypothetical protein, variant 3 [Phytophthora parasitica] >gi|570314370|gb|ETO62318.1| hypothetical protein, variant 3 [Phytophthora parasitica P1976] >gi|570938134|gb|ETP03391.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >gi|570968452|gb|ETP31571.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297]) HSP 1 Score: 255.373 bits (651), Expect = 7.657e-73 Identity = 162/409 (39.61%), Postives = 234/409 (57.21%), Query Frame = 0
Query: 67 RKREKIFIPKDN-PDFNFFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEP--QEDMHVLIEG-TEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEG-HYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENT--RAVSVKGPTKEGVAEALQMIQGQSSE---------------------YGV-----AATLTVPVPSDKVGLIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTVSAPDMQAAEHARSEIQALLAGGPGGGGAMGGGAPQGGTALVMHIDQDKVGLIIGRSGAVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLM 442
+KR+K++IP D PD NF LLIGPRGS QKR+++ +GARI IRG SK P GEP E++HVLI T+E VA A+ VE ILF+P +AM+LK QLR +AEL G + + G + G HYGP G A+ + DMK+P +VG +IGRGGE I+ + K+G +Q+ +E E T R V++ G +E + A ++IQ E YG + ++ + VP+++VGLIIGRGG TI+ IQ+RTG +V IP + P+ RL+T+ M+A E A+ EIQ+L++ PG G + G + M + D+VG+IIG+ G IK IQ R RIQ+P A+ ++PPVR ++I GP A+ E++ ++
Sbjct: 4 KKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGARILIRGKGSSKD---PTGEPDENEELHVLITADTDEAVAKAQSAVEDILFNPQQAMKLKQEQLRKVAELNGTLNENYDSHAIGQNSGAHYGP-------GNDAQASSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRYVNIAG-NQEALDLAQRLIQNLIDERQQNQSAGGFRERDDRDRMARYGGINPDGSDSVELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPDKRLITIRGT-MEAKEAAKFEIQSLVSEEPGQRHGYGMAS---GQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADEGSNPPVRTISIQGPPQNLAGAKEEVDMVIL 397 The following BLAST results are available for this feature:
BLAST of EWM29308.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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