EWM29311.1, cds1363 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29311.1 vs. NCBI_GenBank
Match: gi|585111835|gb|EWM29311.1| (hypothetical protein Naga_100152g4 [Nannochloropsis gaditana]) HSP 1 Score: 3274.18 bits (8488), Expect = 0.000e+0 Identity = 1607/1607 (100.00%), Postives = 1607/1607 (100.00%), Query Frame = 0
Query: 1 MQMVVCNQYHFPPPGAVLTADGGDKGSRRNGIKKRTSVGSLSGAFGGGSGDVRGAEGQIMAADTELAEEEAVLSKVLRGERRTGKKRKRLNVNRAGEGDVPDNKPLLSLIFLDLSMPPRTPPADVIERLKALNAEFGIGARLRRATEPDFVAAAIAGDGSRGVSRRMLMTTMEWLAPAVAAEPQVTLRRLPLECICHMYMIAHMKTSQKGHAQPRQHPLGQSGNERGERTPASAVRGALQTLLGPMRRIILDRLFEECEPTVAGAGERSSAVLSSEVEERASKALSVFTDELRAVETLRRAAARRALDELLVHSPERSKRVAEAGMVDAQGDAWVGTDLAVRMGEPGFVARASQVHCAWMFHLQDLPCFRSKPAATLRALYEALQVEASHHVISYYLLGLLFHCHGPAAASGDRFRIRRSKTKGRGYKLSGSFRSPSFFSFVASTVLISRKLVVQAAMEHTPFLRRVLVEEVTATLAESSCAQGDSLATPGEKCTTHDEETTTQSKHAKRVWQSCDLARLCLSCDDLSGPRNVLLPDTLLAACFSLMSMHKGSSIPPVLEQLLGLLFPSAVNAPDGRLLGASGASKVSDAAADVDGMERDEGERAALGPEEWIGLVKCESHVISAAAARCMPHVFLPTLIFCSGLSRDSFYAALSRIEELSKGAKKAETVYRELLWSSSEATRQGSRSLNMQPSLLRKLARHTTAYIQLHAPRNESERATCAGNFCSWLSHEVPSAVSARTLARNEPSDVPKRDDSLTRRRGGPSTFPSTRNRTTTNHMLLESVRGLTLDMEQEEALPEAAPSKERGDSGILTYSSSGIETPCKFPVVPADAEQSIVDFMLPFKMRKEEKDSRDGEGRSSLNKLINRALSAATEASRAELLHVLSQVACSLGSEFVTGPMGRWRWHSKYAHDGEEQLVEVSYIVQLLHRCIRSTAFSVGTGQEGEDSSIEEGGARLIAKLLCQVCLMHWLAVDEEGLGARCQGLIWDLLLSCRSTPYTGSCSNVRHALLSQVLETFSVDELEPLVQRIFKDSGKANLAGASGDGSVESPPFDVYVALSLLNRWFCRPGQSPMVTELGLSPGTRQGLAAAAAARTIPSTTSPLVSLSAQGLSDKSGHPFLVRDGATLSLSPGDLDTVLKLVCQGLALLNGLQGNMGAQRNHSSRDGPTQHLLLFHESIAALCIHLSDRHSTFRRVLMQQLLSLFKDKTTPSSCEAYIVYRLYMAFPADAAIRGRGEYRDTNLMVRALCEGAALQRRPCRSTMDQSLPDDVAHLCRLGLNAQRDSDVVYRLHELAHSHPYLILQTIPALTDILTVDASPDTDRPVVRAPFYFPRPPPVKDGSGHFEPSLPPTSSACGGNEIFLATFASKNEAAPASALQCPSGPLSSIAVELCLPRRVRATFWGLSFRPQLWRAVLDLVMEVPASCMAAYVSASSSGGLGRLEEIMALSSTYVRLLAAQERASQCPPEGASSPPQPPDKVKGKPKKHQLRKQPPGEQEPPLAAPLAFSALHQRPLETGVLNAVESDGCLFYMAERLLLLLRELEKHHPSPVVGFLQTPDPTLGREEKPFDVVRRRLEKIPHVPPGEQSHEQSRSSAPGPAVSVPQPRRV 1607
MQMVVCNQYHFPPPGAVLTADGGDKGSRRNGIKKRTSVGSLSGAFGGGSGDVRGAEGQIMAADTELAEEEAVLSKVLRGERRTGKKRKRLNVNRAGEGDVPDNKPLLSLIFLDLSMPPRTPPADVIERLKALNAEFGIGARLRRATEPDFVAAAIAGDGSRGVSRRMLMTTMEWLAPAVAAEPQVTLRRLPLECICHMYMIAHMKTSQKGHAQPRQHPLGQSGNERGERTPASAVRGALQTLLGPMRRIILDRLFEECEPTVAGAGERSSAVLSSEVEERASKALSVFTDELRAVETLRRAAARRALDELLVHSPERSKRVAEAGMVDAQGDAWVGTDLAVRMGEPGFVARASQVHCAWMFHLQDLPCFRSKPAATLRALYEALQVEASHHVISYYLLGLLFHCHGPAAASGDRFRIRRSKTKGRGYKLSGSFRSPSFFSFVASTVLISRKLVVQAAMEHTPFLRRVLVEEVTATLAESSCAQGDSLATPGEKCTTHDEETTTQSKHAKRVWQSCDLARLCLSCDDLSGPRNVLLPDTLLAACFSLMSMHKGSSIPPVLEQLLGLLFPSAVNAPDGRLLGASGASKVSDAAADVDGMERDEGERAALGPEEWIGLVKCESHVISAAAARCMPHVFLPTLIFCSGLSRDSFYAALSRIEELSKGAKKAETVYRELLWSSSEATRQGSRSLNMQPSLLRKLARHTTAYIQLHAPRNESERATCAGNFCSWLSHEVPSAVSARTLARNEPSDVPKRDDSLTRRRGGPSTFPSTRNRTTTNHMLLESVRGLTLDMEQEEALPEAAPSKERGDSGILTYSSSGIETPCKFPVVPADAEQSIVDFMLPFKMRKEEKDSRDGEGRSSLNKLINRALSAATEASRAELLHVLSQVACSLGSEFVTGPMGRWRWHSKYAHDGEEQLVEVSYIVQLLHRCIRSTAFSVGTGQEGEDSSIEEGGARLIAKLLCQVCLMHWLAVDEEGLGARCQGLIWDLLLSCRSTPYTGSCSNVRHALLSQVLETFSVDELEPLVQRIFKDSGKANLAGASGDGSVESPPFDVYVALSLLNRWFCRPGQSPMVTELGLSPGTRQGLAAAAAARTIPSTTSPLVSLSAQGLSDKSGHPFLVRDGATLSLSPGDLDTVLKLVCQGLALLNGLQGNMGAQRNHSSRDGPTQHLLLFHESIAALCIHLSDRHSTFRRVLMQQLLSLFKDKTTPSSCEAYIVYRLYMAFPADAAIRGRGEYRDTNLMVRALCEGAALQRRPCRSTMDQSLPDDVAHLCRLGLNAQRDSDVVYRLHELAHSHPYLILQTIPALTDILTVDASPDTDRPVVRAPFYFPRPPPVKDGSGHFEPSLPPTSSACGGNEIFLATFASKNEAAPASALQCPSGPLSSIAVELCLPRRVRATFWGLSFRPQLWRAVLDLVMEVPASCMAAYVSASSSGGLGRLEEIMALSSTYVRLLAAQERASQCPPEGASSPPQPPDKVKGKPKKHQLRKQPPGEQEPPLAAPLAFSALHQRPLETGVLNAVESDGCLFYMAERLLLLLRELEKHHPSPVVGFLQTPDPTLGREEKPFDVVRRRLEKIPHVPPGEQSHEQSRSSAPGPAVSVPQPRRV
Sbjct: 1 MQMVVCNQYHFPPPGAVLTADGGDKGSRRNGIKKRTSVGSLSGAFGGGSGDVRGAEGQIMAADTELAEEEAVLSKVLRGERRTGKKRKRLNVNRAGEGDVPDNKPLLSLIFLDLSMPPRTPPADVIERLKALNAEFGIGARLRRATEPDFVAAAIAGDGSRGVSRRMLMTTMEWLAPAVAAEPQVTLRRLPLECICHMYMIAHMKTSQKGHAQPRQHPLGQSGNERGERTPASAVRGALQTLLGPMRRIILDRLFEECEPTVAGAGERSSAVLSSEVEERASKALSVFTDELRAVETLRRAAARRALDELLVHSPERSKRVAEAGMVDAQGDAWVGTDLAVRMGEPGFVARASQVHCAWMFHLQDLPCFRSKPAATLRALYEALQVEASHHVISYYLLGLLFHCHGPAAASGDRFRIRRSKTKGRGYKLSGSFRSPSFFSFVASTVLISRKLVVQAAMEHTPFLRRVLVEEVTATLAESSCAQGDSLATPGEKCTTHDEETTTQSKHAKRVWQSCDLARLCLSCDDLSGPRNVLLPDTLLAACFSLMSMHKGSSIPPVLEQLLGLLFPSAVNAPDGRLLGASGASKVSDAAADVDGMERDEGERAALGPEEWIGLVKCESHVISAAAARCMPHVFLPTLIFCSGLSRDSFYAALSRIEELSKGAKKAETVYRELLWSSSEATRQGSRSLNMQPSLLRKLARHTTAYIQLHAPRNESERATCAGNFCSWLSHEVPSAVSARTLARNEPSDVPKRDDSLTRRRGGPSTFPSTRNRTTTNHMLLESVRGLTLDMEQEEALPEAAPSKERGDSGILTYSSSGIETPCKFPVVPADAEQSIVDFMLPFKMRKEEKDSRDGEGRSSLNKLINRALSAATEASRAELLHVLSQVACSLGSEFVTGPMGRWRWHSKYAHDGEEQLVEVSYIVQLLHRCIRSTAFSVGTGQEGEDSSIEEGGARLIAKLLCQVCLMHWLAVDEEGLGARCQGLIWDLLLSCRSTPYTGSCSNVRHALLSQVLETFSVDELEPLVQRIFKDSGKANLAGASGDGSVESPPFDVYVALSLLNRWFCRPGQSPMVTELGLSPGTRQGLAAAAAARTIPSTTSPLVSLSAQGLSDKSGHPFLVRDGATLSLSPGDLDTVLKLVCQGLALLNGLQGNMGAQRNHSSRDGPTQHLLLFHESIAALCIHLSDRHSTFRRVLMQQLLSLFKDKTTPSSCEAYIVYRLYMAFPADAAIRGRGEYRDTNLMVRALCEGAALQRRPCRSTMDQSLPDDVAHLCRLGLNAQRDSDVVYRLHELAHSHPYLILQTIPALTDILTVDASPDTDRPVVRAPFYFPRPPPVKDGSGHFEPSLPPTSSACGGNEIFLATFASKNEAAPASALQCPSGPLSSIAVELCLPRRVRATFWGLSFRPQLWRAVLDLVMEVPASCMAAYVSASSSGGLGRLEEIMALSSTYVRLLAAQERASQCPPEGASSPPQPPDKVKGKPKKHQLRKQPPGEQEPPLAAPLAFSALHQRPLETGVLNAVESDGCLFYMAERLLLLLRELEKHHPSPVVGFLQTPDPTLGREEKPFDVVRRRLEKIPHVPPGEQSHEQSRSSAPGPAVSVPQPRRV 1607
BLAST of EWM29311.1 vs. NCBI_GenBank
Match: gi|219121436|ref|XP_002185942.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582791|gb|ACI65412.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 65.4698 bits (158), Expect = 9.765e-7 Identity = 53/179 (29.61%), Postives = 84/179 (46.93%), Query Frame = 0
Query: 606 ALGPEEWIGLVKCESHVISAAAARCMPHVFLPTLIFCSGLSRDSFYAALSRIEELSKGAKKAETVYRELLWSSSEATRQGSRSLNMQPSLLRKLARHTTAYIQLHAPRNESERATCAGNFCSWLSHEVPSAVSARTLARNEPSDVPKRDDSLTRRRGGPS-TFPSTRNRTTTNHMLLES 783
A+ E WI L K S +I+ AA P FLP L+ CSGL + S L+R+ L A+ + +YR LL S+ + R + + + RKL +AYI+L+ + + F WLS E + +A + +P ++ + L R G S + R+ NH+ +ES
Sbjct: 1423 AVKVESWILLAKSRSDLIARRAAMSAPDEFLPRLLLCSGLPKASLLTMLNRLGRLGDSAQNSVLLYRSLLTPSASSEWDIGR-VGRRRDISRKLLGRLSAYIRLNNIDLGLDPLKVSRTFLDWLSAEC--STNASKACKAKPKNLKTENPRLLSRVGERSPSLTEIGARSVGNHVEMES 1598 The following BLAST results are available for this feature:
BLAST of EWM29311.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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