EWM29330.1, cds1345 (CDS) Nannochloropsis gaditana

Overview
NameEWM29330.1
Unique Namecds1345
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:406526..406675 +
Alignment locationCM002457.1:406764..408465 +
Alignment locationCM002457.1:409516..409731 +
Alignment locationCM002457.1:409824..410889 +
Alignment locationCM002457.1:410951..411056 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29330.1
Productpyruvate dehydrogenase e1 component alpha subunit
Orig transcript idgnl|cribi|Naga_100136g4.3181.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:406526..406675 +
CM002457.1supercontigCM002457.1:406764..408465 +
CM002457.1supercontigCM002457.1:409516..409731 +
CM002457.1supercontigCM002457.1:409824..410889 +
CM002457.1supercontigCM002457.1:410951..411056 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0009056catabolic process
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
GO:0008152metabolic process
GO:0055114oxidation-reduction process
GO:0006096glycolytic process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0043231intracellular membrane-bounded organelle
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0004739pyruvate dehydrogenase (acetyl-transferring) activity
Vocabulary: INTERPRO
TermDefinition
IPR029061THDP-binding
IPR001017DH_E1
IPR017597Pyrv_DH_E1_asu_subgrp-y
Homology
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|585111856|gb|EWM29330.1| (pyruvate dehydrogenase e1 component alpha subunit [Nannochloropsis gaditana])

HSP 1 Score: 2235.3 bits (5791), Expect = 0.000e+0
Identity = 1079/1079 (100.00%), Postives = 1079/1079 (100.00%), Query Frame = 0
Query:    1 MSARKINPFKDTNVLHRLRAKARTGFKSPGWVMAAVTAIPPCTPPPQPRTVPNLVLPTDRLLVGYERKFPEAMQDVVRSVDGRLVNRSMVFVQKQYAFIQEGHSEAEAFKLTEAALAEEEGKALKQLEEVTAQARATGAIPALSAMERQKDGRWDRLQFWRKELSSSPYETWSHGKQASLDRWLTKDMLEWEPHQTRYLGQQRFQDSLKAARETIFADIVKPLREKLRTAESAAGTALTPEDLYSFQLEQAVGEYQEWEEKMLARQAGTWGSEEIAALQEWLERNHALVMPGFQDPRPQVAGGFADQARRHARGQVLQYIAFPLLRPEFQSIPYLSRYLARAFAEVAKQEAGRGLRPILISGPLGRREADFAAGEAMLNDALPKLVVKTFVTVAVERPFAWELMRCLLTERIRTAASAADLETLPELRGLGGREAMAQHVEGLIQHLTEVLMTLAADEDTSGLGQDIDVAYGAVNELHRVAQELLHAGEAGAEGGAEGGAEAGHAYDAAIDAYKQEHHGWVAEDLAIGEALRKFDPKVEAMFGVGVPEAHKAQEAAVERKQSQVLEEAGRDFAFRKREAGRWAWERSVGLGEVDEYDKRWLRRPQKGRVAAERGEEAVANPNTFSQTPHSRSLPYRMLTMRRGLQLLGRKASRSSGGGLGGKVNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKSRTFAMGRPRRTGTARGTRGEIRGELNNGEKDERLFRLH 1079
            MSARKINPFKDTNVLHRLRAKARTGFKSPGWVMAAVTAIPPCTPPPQPRTVPNLVLPTDRLLVGYERKFPEAMQDVVRSVDGRLVNRSMVFVQKQYAFIQEGHSEAEAFKLTEAALAEEEGKALKQLEEVTAQARATGAIPALSAMERQKDGRWDRLQFWRKELSSSPYETWSHGKQASLDRWLTKDMLEWEPHQTRYLGQQRFQDSLKAARETIFADIVKPLREKLRTAESAAGTALTPEDLYSFQLEQAVGEYQEWEEKMLARQAGTWGSEEIAALQEWLERNHALVMPGFQDPRPQVAGGFADQARRHARGQVLQYIAFPLLRPEFQSIPYLSRYLARAFAEVAKQEAGRGLRPILISGPLGRREADFAAGEAMLNDALPKLVVKTFVTVAVERPFAWELMRCLLTERIRTAASAADLETLPELRGLGGREAMAQHVEGLIQHLTEVLMTLAADEDTSGLGQDIDVAYGAVNELHRVAQELLHAGEAGAEGGAEGGAEAGHAYDAAIDAYKQEHHGWVAEDLAIGEALRKFDPKVEAMFGVGVPEAHKAQEAAVERKQSQVLEEAGRDFAFRKREAGRWAWERSVGLGEVDEYDKRWLRRPQKGRVAAERGEEAVANPNTFSQTPHSRSLPYRMLTMRRGLQLLGRKASRSSGGGLGGKVNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKSRTFAMGRPRRTGTARGTRGEIRGELNNGEKDERLFRLH
Sbjct:    1 MSARKINPFKDTNVLHRLRAKARTGFKSPGWVMAAVTAIPPCTPPPQPRTVPNLVLPTDRLLVGYERKFPEAMQDVVRSVDGRLVNRSMVFVQKQYAFIQEGHSEAEAFKLTEAALAEEEGKALKQLEEVTAQARATGAIPALSAMERQKDGRWDRLQFWRKELSSSPYETWSHGKQASLDRWLTKDMLEWEPHQTRYLGQQRFQDSLKAARETIFADIVKPLREKLRTAESAAGTALTPEDLYSFQLEQAVGEYQEWEEKMLARQAGTWGSEEIAALQEWLERNHALVMPGFQDPRPQVAGGFADQARRHARGQVLQYIAFPLLRPEFQSIPYLSRYLARAFAEVAKQEAGRGLRPILISGPLGRREADFAAGEAMLNDALPKLVVKTFVTVAVERPFAWELMRCLLTERIRTAASAADLETLPELRGLGGREAMAQHVEGLIQHLTEVLMTLAADEDTSGLGQDIDVAYGAVNELHRVAQELLHAGEAGAEGGAEGGAEAGHAYDAAIDAYKQEHHGWVAEDLAIGEALRKFDPKVEAMFGVGVPEAHKAQEAAVERKQSQVLEEAGRDFAFRKREAGRWAWERSVGLGEVDEYDKRWLRRPQKGRVAAERGEEAVANPNTFSQTPHSRSLPYRMLTMRRGLQLLGRKASRSSGGGLGGKVNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKSRTFAMGRPRRTGTARGTRGEIRGELNNGEKDERLFRLH 1079          
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|1210513856|dbj|GAX27155.1| (pyruvate dehydrogenase E1 component alpha subunit [Fistulifera solaris])

HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0
Identity = 253/382 (66.23%), Postives = 311/382 (81.41%), Query Frame = 0
Query:  663 VNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDD---KGGNQYPPYIRMPDRTKS 1041
            V A      FS+  ++  DLS +F THNL++AP  +   +K+EL     LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+  ALD  DS+ITSYRCHC+AL+RG +V+Q+++ELFGF++G  KGKGGSMHFY+K HNFYGGQGIVGAQVPVG GLAFAN+Y TPPGE MPVAI  YGDGAANQGQIWEAANMA+LWKLPMIFCIENNQYGMGTSI+R SS++ Y+ MGN IPG+R+DGMNV+AVREGM+FVK++  SG GP++VEM TYRYHGHSMSDPGTTYRNR+EI  TRSTRDP+E+VKK L++    +PD++KE EK+IRK+VQ  + +AK  ++P ++ LF+DI+  D   + G+++PP+IRMPD  KS
Sbjct:   14 VRAATSRYYFSTGPAVVFDLSGSFQTHNLETAPNETTECSKDELWNMFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILQALDEKDSYITSYRCHCIALARGGSVKQVVAELFGFEDGMTKGKGGSMHFYNKKHNFYGGQGIVGAQVPVGAGLAFANKYNTPPGERMPVAIGCYGDGAANQGQIWEAANMASLWKLPMIFCIENNQYGMGTSIDRHSSHSDYYKMGNHIPGVRIDGMNVLAVREGMRFVKDYCASGQGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLVDAEFATPDELKEAEKRIRKDVQQQVMEAKESAKPSMDSLFEDIFAKDLVSRSGSEFPPHIRMPDYAKS 395          
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|397591495|gb|EJK55386.1| (hypothetical protein THAOC_24894 [Thalassiosira oceanica])

HSP 1 Score: 557.755 bits (1436), Expect = 0.000e+0
Identity = 252/373 (67.56%), Postives = 302/373 (80.97%), Query Frame = 0
Query:  673 SSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLE-ELFKDIYCDDKGG--NQYPPYIRMPDRTKSR 1042
            SS   +T DL+ +F+THNL++AP  + T TK+EL+ +  LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+N+A DL DSWITSYRCHC AL+RG TVE ++ ELFG   G  KGKGGSMHFY+K+HNF+GGQGIVGAQVPVG GLAF N Y   PGE M VAIA YGDGAANQGQIWEAANMA+LWKLPM+FCIENN YGMGTS+ER SS++ Y+ MGN IPG+R+DGMNV+AV+EGM+FVK+FVGSGNGP++VEM TYRYHGHSMSDPGTTYRNR+EI  TRSTRDP+E+VKK LI+      + +KE EK+IRK+V   +K AKA  +P +E  LF+ ++  D G   N++PP+IRMPD  KS+
Sbjct:   38 SSSDEVTFDLTGSFETHNLETAPSDTITMTKDELLSHFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAAFDLEDSWITSYRCHCTALARGGTVESVLGELFGNAGGQTKGKGGSMHFYNKAHNFFGGQGIVGAQVPVGLGLAFTNHYNAKPGETMNVAIACYGDGAANQGQIWEAANMASLWKLPMVFCIENNHYGMGTSMERHSSHSDYYKMGNHIPGVRIDGMNVLAVKEGMRFVKDFVGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPLEFVKKTLIDAGFADAEQIKETEKRIRKDVASQVKAAKASPKPTVEPHLFEYVFTSDGGKEQNEFPPHIRMPDFAKSK 410          
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|1210513217|dbj|GAX27614.1| (pyruvate dehydrogenase E1 component alpha subunit [Fistulifera solaris])

HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0
Identity = 252/374 (67.38%), Postives = 308/374 (82.35%), Query Frame = 0
Query:  671 AFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDD---KGGNQYPPYIRMPDRTKS 1041
             FS+  ++  DLS +F THNL++AP  +   TK+EL     LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+  ALD  DS+ITSYRCHC+AL+RG +V+Q+++ELFGF+EG  KGKGGSMHFY+K +NFYGGQGIVGAQVPVG GLAFAN+Y TPPGE MPVAI  YGDGAANQGQIWEAANMA+LWKLPMIFCIENNQYGMGTSI+R SS++ Y+ MGN IPG+R+DGMNV+AVREGM+FVK+   SG GP++VEM TYRYHGHSMSDPGTTYRNR+EI  TRSTRDP+E+VKK L++    +PD++KE EK+IRK+VQ  + +AK  ++P ++ LF+DI+  D   + G+++PP+IRMPD  KS
Sbjct:   20 CFSTGPAV-FDLSGSFQTHNLETAPNETTECTKDELWNMFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILQALDEKDSYITSYRCHCIALARGGSVKQVVAELFGFEEGMTKGKGGSMHFYNKKNNFYGGQGIVGAQVPVGAGLAFANKYNTPPGERMPVAIGCYGDGAANQGQIWEAANMASLWKLPMIFCIENNQYGMGTSIDRHSSHSDYYKMGNHIPGVRIDGMNVLAVREGMRFVKDHCASGQGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLVDAEFATPDELKEAEKRIRKDVQQQVMEAKESAKPSMDSLFEDIFAKDLVSRSGSEFPPHIRMPDYAKS 392          
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|676384311|ref|XP_009035434.1| (hypothetical protein AURANDRAFT_53060 [Aureococcus anophagefferens] >gi|323453484|gb|EGB09355.1| hypothetical protein AURANDRAFT_53060 [Aureococcus anophagefferens])

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 256/365 (70.14%), Postives = 298/365 (81.64%), Query Frame = 0
Query:  678 ITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQP-PLEELFKDIYCDDKGGNQYPPYIRMPDRTKS 1041
            +T++   A+ TH  + AP   A  +KEEL+EY + MYTMRRMEITCD EYK RTIRGFCHLYDGQEA+  G+N+ALDL DSWITSYRCHC+ L+RG TVE +++EL G   G   GKGGSMHFY+K  NFYGGQGIVGAQVPVGTGLAFAN+YKTP GE MPVAI  YGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSI RSSSN  Y+TMGN IPGI+MDGMNV++VREGMK VK++VGSGNGP++VEM+TYRYHGHSMSDPGTTYRNRDEI   RSTRDPIE VKK L++H+  + +++K MEK IRKEV DA  +AKAG+ P  + +L  +IY  + G ++   YIRMPD TKS
Sbjct:   24 VTIEFPGAYATHRCE-APDAVAETSKEELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGINAALDLEDSWITSYRCHCIMLARGGTVEGVLAELMGNAHGETGGKGGSMHFYNKEQNFYGGQGIVGAQVPVGTGLAFANKYKTPLGEKMPVAIGCYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSISRSSSNNDYYTMGNLIPGIKMDGMNVLSVREGMKHVKDYVGSGNGPMYVEMSTYRYHGHSMSDPGTTYRNRDEIAAMRSTRDPIEHVKKMLVDHTDATEEELKAMEKVIRKEVADACDRAKAGAPPDSIADLTNNIYLTEDGKSEPQAYIRMPDYTKS 387          
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|219127645|ref|XP_002184042.1| (precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404765|gb|EEC44711.1| precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0
Identity = 253/375 (67.47%), Postives = 299/375 (79.73%), Query Frame = 0
Query:  674 SDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIY-------CDDKGGNQYPPYIRMPDRTKS 1041
            S S  T DL+  F THNLDSAP  S TATK+ELV+   LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+ +A +  DSWITSYRCHC+AL+RG +V Q++ ELFG  +G  +GKGGSMHFY+K HNF+GGQGIVGAQVPVG GLAFAN+Y   PGE M VAIA YGDGAANQGQIWE+ANM+ALWKLPMIFCIENN YGMGTSI+R SS + Y+ MGN IPG+R+DGMNV+AVREGM+F KEF GSGNGP++VEM TYRYHGHSMSDPGTTYRNR+EI  TRSTRDP+E+VKK L+++  +   ++K  EK+IRK VQ+ + KAK  + PPL+EL K I+       CD    ++YPP+IRMP+  KS
Sbjct:   35 STSDGTFDLTGCFQTHNLDSAPSESVTATKQELVDIFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILNAFEPEDSWITSYRCHCIALARGGSVRQVVGELFGVIDGMSRGKGGSMHFYNKKHNFFGGQGIVGAQVPVGAGLAFANKYNAKPGEKMNVAIACYGDGAANQGQIWESANMSALWKLPMIFCIENNHYGMGTSIDRHSSISDYYKMGNSIPGLRIDGMNVLAVREGMRFAKEFCGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLLDNEFIDEAEIKSTEKRIRKSVQEEVMKAKESTSPPLDELTKHIFATSLEPQCD----SEYPPHIRMPNYEKS 405          
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|223995699|ref|XP_002287523.1| (pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335] >gi|220976639|gb|EED94966.1| pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 543.117 bits (1398), Expect = 0.000e+0
Identity = 243/374 (64.97%), Postives = 305/374 (81.55%), Query Frame = 0
Query:  674 SDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLE-ELFKDIYCDDKGG--NQYPPYIRMPDRTKSRTF 1044
            S  + T DL+ +F+T+NLD+ P  +   TK+EL+ +  LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+N+A D  DSWITSYRCHC AL+RG +V  ++ ELFG  +G  KGKGGSMHFY+K+HNF+GGQGIVGAQVPVG GLAFAN Y   PG+ M VAIA YGDGAANQGQIWE+ANMA+LWKLPMIFCIENN YGMGTS++R SS++ Y+ MGN IPG+R+DGMNV+AV+EGM+FVK++VG+GNGP++VEM TYRYHGHSMSDPGTTYRNR+EI  TRSTRDP+E+VK+ L++      +++KE+EK+IRK+V + +K+AKA S+P +E  LF+ +Y  D G   N++PP+IRMPD  KS+ +
Sbjct:    2 STDTATFDLTGSFETYNLDTQPNNTIEMTKDELLSHFELMYTMRRMEITCDNEYKARAIRGFCHLYDGQEAVATGINAAFDPEDSWITSYRCHCTALARGGSVASVLGELFGHVDGQTKGKGGSMHFYNKAHNFFGGQGIVGAQVPVGLGLAFANHYNATPGKPMQVAIACYGDGAANQGQIWESANMASLWKLPMIFCIENNHYGMGTSMDRHSSHSDYYKMGNHIPGVRIDGMNVLAVKEGMRFVKDYVGNGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPLEFVKRTLVDAGFTDAEEIKEIEKRIRKDVANQVKQAKASSKPTVEPHLFEYVYSSDGGKEQNEFPPHIRMPDFAKSKNY 375          
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|953488684|emb|CEG47724.1| (pyruvate dehydrogenase (acetyl-transferring) e1 alpha subunit [Plasmopara halstedii])

HSP 1 Score: 525.783 bits (1353), Expect = 2.591e-174
Identity = 246/382 (64.40%), Postives = 292/382 (76.44%), Query Frame = 0
Query:  664 NATPPTAAFS----SDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKS 1041
            +AT  T AFS    S +    + S  F+ H L+  PP  A   +EE+++Y  LMYTMRRMEIT D EYK RTIRGFCHLYDGQEAVA GV +ALD NDSWITSYR HC+ L+RG TV+ I++ELFG   G   GKGGSMHFY+K  NFYGGQGIVGAQVPVG GLAFA++Y       MP AI M+GDGAANQGQ++EAANMAALWKLP+IFCIENNQYGMGTS +RSS+NT Y+T+GN+IPGI+ DG +V+AVRE  KF+K++ G GNGP+FVEMNTYRYHGHSMSDPG TYRNRDEI Q R++RDPIE VKK +IE  L + D++KE+EK++R EV  A K AKA  +P     F D+Y D KG N YPP+IR PD TKS
Sbjct:   11 SATKATRAFSAATNSSNEAKFEFSMPFELHRLEQGPPEFAVTNREEMLDYYNLMYTMRRMEITNDNEYKARTIRGFCHLYDGQEAVATGVEAALDRNDSWITSYRNHCIMLARGGTVKDILAELFGMASGATGGKGGSMHFYNKKANFYGGQGIVGAQVPVGAGLAFASKYNHKGDGPMPCAITMFGDGAANQGQVFEAANMAALWKLPVIFCIENNQYGMGTSTKRSSNNTDYYTLGNKIPGIKCDGNDVLAVRECTKFMKKWCGEGNGPIFVEMNTYRYHGHSMSDPGVTYRNRDEISQMRASRDPIEMVKKRMIEAELATADEIKEIEKKVRAEVVKATKDAKAAGKPHESAAFTDVYTDGKGNNAYPPFIRFPDYTKS 392          
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|1214711875|gb|OWZ22854.1| (Pyruvate dehydrogenase E1 component subunit alpha [Phytophthora megakarya])

HSP 1 Score: 517.694 bits (1332), Expect = 2.264e-171
Identity = 238/383 (62.14%), Postives = 292/383 (76.24%), Query Frame = 0
Query:  669 TAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKSRTFAMGRPRR 1051
            +AA ++      D S  F+ H L+  P   A   +EE++ Y ++MYTMRRMEIT D EYK RTIRGFCHLYDGQEAVA GV +ALD  DSWITSYR HC+ L+RG+ V+ +++ELFG K+G   GKGGSMHFY K  NFYGGQGIVGAQVPVG GLAFA++Y       MP AI M+GDGA+NQGQ++EAANMAALWKLP+IFCIENN YGMGTS +RSS+NT Y+TMGN+IPGI+ DG +V+AVRE  KF+K++ G GNGP+FVEMNTYRYHGHSMSDPG TYRNRDEI Q R++RDPIE VKK +IE  L + D++KE+EK++R EV  A K+AKA   P +   F D+Y D KG N+YPP+IR PD  KS     G+P++
Sbjct:   23 SAAANASGEAKFDFSMPFELHRLEQGPAEFAVTNREEMLGYYKMMYTMRRMEITNDNEYKARTIRGFCHLYDGQEAVATGVEAALDRKDSWITSYRNHCIMLARGAEVKDVLAELFGMKDGATGGKGGSMHFYKKEANFYGGQGIVGAQVPVGAGLAFASKYNHNGEGLMPCAITMFGDGASNQGQVFEAANMAALWKLPVIFCIENNHYGMGTSAQRSSNNTDYYTMGNKIPGIKCDGNDVLAVRECTKFLKQWCGEGNGPIFVEMNTYRYHGHSMSDPGVTYRNRDEISQMRASRDPIELVKKRMIEAELATADEIKEIEKKVRAEVVKATKEAKASGIPDVATAFTDVYTDGKGNNEYPPFIRFPDYAKS--LYNGKPQQ 403          
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|1072231236|gb|OEU15969.1| (pyruvate dehydrogenase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 516.153 bits (1328), Expect = 4.005e-171
Identity = 241/373 (64.61%), Postives = 284/373 (76.14%), Query Frame = 0
Query:  674 SDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKG--GNQYPPYIRMPDRTKSRTF 1044
            S +S   D+S +++ HN ++ PP +   TKEELV     MYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+ +AL   DSW+TSYRCH +AL RG +V ++I ELFG   G  KGKGGSMH Y+K HNF+GG GIVGAQVPVGTGLAFAN+YK  PGE M VAIA YGDGAANQGQIWE+ANMA LW LPMI+CIENN YGMGTSI+R SS + Y+ MGN IPG+R+DGMNV++V EGMKF KE+VG+GNGP++VEM TYRYHGHSMSDPGTTYRNRDEI  TRS RDP+E VK  L E   +S +++KE EK+IRKEVQ  + KAK  + P  +E+  DIY          YPP++RMPD  KS TF
Sbjct:    2 SSTSHAFDISGSYELHNFETGPPETTEVTKEELVNIFETMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVACGIQAALAPEDSWVTSYRCHVLALMRGGSVSEVIGELFGKAGGVTKGKGGSMHMYNKEHNFFGGHGIVGAQVPVGTGLAFANKYKAKPGEPMNVAIACYGDGAANQGQIWESANMANLWDLPMIYCIENNHYGMGTSIDRHSSISDYYKMGNAIPGLRIDGMNVLSVIEGMKFAKEYVGAGNGPIYVEMMTYRYHGHSMSDPGTTYRNRDEIEFTRSNRDPVEHVKSCLQEADFMSAEEIKETEKRIRKEVQKEVMKAKEWATPEYKEVATDIYAKSLTPYDGTYPPFVRMPDFAKSFTF 374          
The following BLAST results are available for this feature:
BLAST of EWM29330.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111856|gb|EWM29330.1|0.000e+0100.00pyruvate dehydrogenase e1 component alpha subunit ... [more]
gi|1210513856|dbj|GAX27155.1|0.000e+066.23pyruvate dehydrogenase E1 component alpha subunit ... [more]
gi|397591495|gb|EJK55386.1|0.000e+067.56hypothetical protein THAOC_24894 [Thalassiosira oc... [more]
gi|1210513217|dbj|GAX27614.1|0.000e+067.38pyruvate dehydrogenase E1 component alpha subunit ... [more]
gi|676384311|ref|XP_009035434.1|0.000e+070.14hypothetical protein AURANDRAFT_53060 [Aureococcus... [more]
gi|219127645|ref|XP_002184042.1|0.000e+067.47precursor of dehydrogenase pyruvate dehydrogenase ... [more]
gi|223995699|ref|XP_002287523.1|0.000e+064.97pyruvate dehydrogenase [Thalassiosira pseudonana C... [more]
gi|953488684|emb|CEG47724.1|2.591e-17464.40pyruvate dehydrogenase (acetyl-transferring) e1 al... [more]
gi|1214711875|gb|OWZ22854.1|2.264e-17162.14Pyruvate dehydrogenase E1 component subunit alpha ... [more]
gi|1072231236|gb|OEU15969.1|4.005e-17164.61pyruvate dehydrogenase [Fragilariopsis cylindrus C... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1347rna1347Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications