EWM29330.1, cds1345 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|585111856|gb|EWM29330.1| (pyruvate dehydrogenase e1 component alpha subunit [Nannochloropsis gaditana]) HSP 1 Score: 2235.3 bits (5791), Expect = 0.000e+0 Identity = 1079/1079 (100.00%), Postives = 1079/1079 (100.00%), Query Frame = 0
Query: 1 MSARKINPFKDTNVLHRLRAKARTGFKSPGWVMAAVTAIPPCTPPPQPRTVPNLVLPTDRLLVGYERKFPEAMQDVVRSVDGRLVNRSMVFVQKQYAFIQEGHSEAEAFKLTEAALAEEEGKALKQLEEVTAQARATGAIPALSAMERQKDGRWDRLQFWRKELSSSPYETWSHGKQASLDRWLTKDMLEWEPHQTRYLGQQRFQDSLKAARETIFADIVKPLREKLRTAESAAGTALTPEDLYSFQLEQAVGEYQEWEEKMLARQAGTWGSEEIAALQEWLERNHALVMPGFQDPRPQVAGGFADQARRHARGQVLQYIAFPLLRPEFQSIPYLSRYLARAFAEVAKQEAGRGLRPILISGPLGRREADFAAGEAMLNDALPKLVVKTFVTVAVERPFAWELMRCLLTERIRTAASAADLETLPELRGLGGREAMAQHVEGLIQHLTEVLMTLAADEDTSGLGQDIDVAYGAVNELHRVAQELLHAGEAGAEGGAEGGAEAGHAYDAAIDAYKQEHHGWVAEDLAIGEALRKFDPKVEAMFGVGVPEAHKAQEAAVERKQSQVLEEAGRDFAFRKREAGRWAWERSVGLGEVDEYDKRWLRRPQKGRVAAERGEEAVANPNTFSQTPHSRSLPYRMLTMRRGLQLLGRKASRSSGGGLGGKVNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKSRTFAMGRPRRTGTARGTRGEIRGELNNGEKDERLFRLH 1079
MSARKINPFKDTNVLHRLRAKARTGFKSPGWVMAAVTAIPPCTPPPQPRTVPNLVLPTDRLLVGYERKFPEAMQDVVRSVDGRLVNRSMVFVQKQYAFIQEGHSEAEAFKLTEAALAEEEGKALKQLEEVTAQARATGAIPALSAMERQKDGRWDRLQFWRKELSSSPYETWSHGKQASLDRWLTKDMLEWEPHQTRYLGQQRFQDSLKAARETIFADIVKPLREKLRTAESAAGTALTPEDLYSFQLEQAVGEYQEWEEKMLARQAGTWGSEEIAALQEWLERNHALVMPGFQDPRPQVAGGFADQARRHARGQVLQYIAFPLLRPEFQSIPYLSRYLARAFAEVAKQEAGRGLRPILISGPLGRREADFAAGEAMLNDALPKLVVKTFVTVAVERPFAWELMRCLLTERIRTAASAADLETLPELRGLGGREAMAQHVEGLIQHLTEVLMTLAADEDTSGLGQDIDVAYGAVNELHRVAQELLHAGEAGAEGGAEGGAEAGHAYDAAIDAYKQEHHGWVAEDLAIGEALRKFDPKVEAMFGVGVPEAHKAQEAAVERKQSQVLEEAGRDFAFRKREAGRWAWERSVGLGEVDEYDKRWLRRPQKGRVAAERGEEAVANPNTFSQTPHSRSLPYRMLTMRRGLQLLGRKASRSSGGGLGGKVNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKSRTFAMGRPRRTGTARGTRGEIRGELNNGEKDERLFRLH
Sbjct: 1 MSARKINPFKDTNVLHRLRAKARTGFKSPGWVMAAVTAIPPCTPPPQPRTVPNLVLPTDRLLVGYERKFPEAMQDVVRSVDGRLVNRSMVFVQKQYAFIQEGHSEAEAFKLTEAALAEEEGKALKQLEEVTAQARATGAIPALSAMERQKDGRWDRLQFWRKELSSSPYETWSHGKQASLDRWLTKDMLEWEPHQTRYLGQQRFQDSLKAARETIFADIVKPLREKLRTAESAAGTALTPEDLYSFQLEQAVGEYQEWEEKMLARQAGTWGSEEIAALQEWLERNHALVMPGFQDPRPQVAGGFADQARRHARGQVLQYIAFPLLRPEFQSIPYLSRYLARAFAEVAKQEAGRGLRPILISGPLGRREADFAAGEAMLNDALPKLVVKTFVTVAVERPFAWELMRCLLTERIRTAASAADLETLPELRGLGGREAMAQHVEGLIQHLTEVLMTLAADEDTSGLGQDIDVAYGAVNELHRVAQELLHAGEAGAEGGAEGGAEAGHAYDAAIDAYKQEHHGWVAEDLAIGEALRKFDPKVEAMFGVGVPEAHKAQEAAVERKQSQVLEEAGRDFAFRKREAGRWAWERSVGLGEVDEYDKRWLRRPQKGRVAAERGEEAVANPNTFSQTPHSRSLPYRMLTMRRGLQLLGRKASRSSGGGLGGKVNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKSRTFAMGRPRRTGTARGTRGEIRGELNNGEKDERLFRLH 1079
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|1210513856|dbj|GAX27155.1| (pyruvate dehydrogenase E1 component alpha subunit [Fistulifera solaris]) HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0 Identity = 253/382 (66.23%), Postives = 311/382 (81.41%), Query Frame = 0
Query: 663 VNATPPTAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDD---KGGNQYPPYIRMPDRTKS 1041
V A FS+ ++ DLS +F THNL++AP + +K+EL LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+ ALD DS+ITSYRCHC+AL+RG +V+Q+++ELFGF++G KGKGGSMHFY+K HNFYGGQGIVGAQVPVG GLAFAN+Y TPPGE MPVAI YGDGAANQGQIWEAANMA+LWKLPMIFCIENNQYGMGTSI+R SS++ Y+ MGN IPG+R+DGMNV+AVREGM+FVK++ SG GP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VKK L++ +PD++KE EK+IRK+VQ + +AK ++P ++ LF+DI+ D + G+++PP+IRMPD KS
Sbjct: 14 VRAATSRYYFSTGPAVVFDLSGSFQTHNLETAPNETTECSKDELWNMFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILQALDEKDSYITSYRCHCIALARGGSVKQVVAELFGFEDGMTKGKGGSMHFYNKKHNFYGGQGIVGAQVPVGAGLAFANKYNTPPGERMPVAIGCYGDGAANQGQIWEAANMASLWKLPMIFCIENNQYGMGTSIDRHSSHSDYYKMGNHIPGVRIDGMNVLAVREGMRFVKDYCASGQGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLVDAEFATPDELKEAEKRIRKDVQQQVMEAKESAKPSMDSLFEDIFAKDLVSRSGSEFPPHIRMPDYAKS 395
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|397591495|gb|EJK55386.1| (hypothetical protein THAOC_24894 [Thalassiosira oceanica]) HSP 1 Score: 557.755 bits (1436), Expect = 0.000e+0 Identity = 252/373 (67.56%), Postives = 302/373 (80.97%), Query Frame = 0
Query: 673 SSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLE-ELFKDIYCDDKGG--NQYPPYIRMPDRTKSR 1042
SS +T DL+ +F+THNL++AP + T TK+EL+ + LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+N+A DL DSWITSYRCHC AL+RG TVE ++ ELFG G KGKGGSMHFY+K+HNF+GGQGIVGAQVPVG GLAF N Y PGE M VAIA YGDGAANQGQIWEAANMA+LWKLPM+FCIENN YGMGTS+ER SS++ Y+ MGN IPG+R+DGMNV+AV+EGM+FVK+FVGSGNGP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VKK LI+ + +KE EK+IRK+V +K AKA +P +E LF+ ++ D G N++PP+IRMPD KS+
Sbjct: 38 SSSDEVTFDLTGSFETHNLETAPSDTITMTKDELLSHFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGINAAFDLEDSWITSYRCHCTALARGGTVESVLGELFGNAGGQTKGKGGSMHFYNKAHNFFGGQGIVGAQVPVGLGLAFTNHYNAKPGETMNVAIACYGDGAANQGQIWEAANMASLWKLPMVFCIENNHYGMGTSMERHSSHSDYYKMGNHIPGVRIDGMNVLAVKEGMRFVKDFVGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPLEFVKKTLIDAGFADAEQIKETEKRIRKDVASQVKAAKASPKPTVEPHLFEYVFTSDGGKEQNEFPPHIRMPDFAKSK 410
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|1210513217|dbj|GAX27614.1| (pyruvate dehydrogenase E1 component alpha subunit [Fistulifera solaris]) HSP 1 Score: 556.984 bits (1434), Expect = 0.000e+0 Identity = 252/374 (67.38%), Postives = 308/374 (82.35%), Query Frame = 0
Query: 671 AFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDD---KGGNQYPPYIRMPDRTKS 1041
FS+ ++ DLS +F THNL++AP + TK+EL LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+ ALD DS+ITSYRCHC+AL+RG +V+Q+++ELFGF+EG KGKGGSMHFY+K +NFYGGQGIVGAQVPVG GLAFAN+Y TPPGE MPVAI YGDGAANQGQIWEAANMA+LWKLPMIFCIENNQYGMGTSI+R SS++ Y+ MGN IPG+R+DGMNV+AVREGM+FVK+ SG GP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VKK L++ +PD++KE EK+IRK+VQ + +AK ++P ++ LF+DI+ D + G+++PP+IRMPD KS
Sbjct: 20 CFSTGPAV-FDLSGSFQTHNLETAPNETTECTKDELWNMFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILQALDEKDSYITSYRCHCIALARGGSVKQVVAELFGFEEGMTKGKGGSMHFYNKKNNFYGGQGIVGAQVPVGAGLAFANKYNTPPGERMPVAIGCYGDGAANQGQIWEAANMASLWKLPMIFCIENNQYGMGTSIDRHSSHSDYYKMGNHIPGVRIDGMNVLAVREGMRFVKDHCASGQGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLVDAEFATPDELKEAEKRIRKDVQQQVMEAKESAKPSMDSLFEDIFAKDLVSRSGSEFPPHIRMPDYAKS 392
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|676384311|ref|XP_009035434.1| (hypothetical protein AURANDRAFT_53060 [Aureococcus anophagefferens] >gi|323453484|gb|EGB09355.1| hypothetical protein AURANDRAFT_53060 [Aureococcus anophagefferens]) HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0 Identity = 256/365 (70.14%), Postives = 298/365 (81.64%), Query Frame = 0
Query: 678 ITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQP-PLEELFKDIYCDDKGGNQYPPYIRMPDRTKS 1041
+T++ A+ TH + AP A +KEEL+EY + MYTMRRMEITCD EYK RTIRGFCHLYDGQEA+ G+N+ALDL DSWITSYRCHC+ L+RG TVE +++EL G G GKGGSMHFY+K NFYGGQGIVGAQVPVGTGLAFAN+YKTP GE MPVAI YGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSI RSSSN Y+TMGN IPGI+MDGMNV++VREGMK VK++VGSGNGP++VEM+TYRYHGHSMSDPGTTYRNRDEI RSTRDPIE VKK L++H+ + +++K MEK IRKEV DA +AKAG+ P + +L +IY + G ++ YIRMPD TKS
Sbjct: 24 VTIEFPGAYATHRCE-APDAVAETSKEELLEYFKTMYTMRRMEITCDNEYKARTIRGFCHLYDGQEAIGTGINAALDLEDSWITSYRCHCIMLARGGTVEGVLAELMGNAHGETGGKGGSMHFYNKEQNFYGGQGIVGAQVPVGTGLAFANKYKTPLGEKMPVAIGCYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSISRSSSNNDYYTMGNLIPGIKMDGMNVLSVREGMKHVKDYVGSGNGPMYVEMSTYRYHGHSMSDPGTTYRNRDEIAAMRSTRDPIEHVKKMLVDHTDATEEELKAMEKVIRKEVADACDRAKAGAPPDSIADLTNNIYLTEDGKSEPQAYIRMPDYTKS 387
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|219127645|ref|XP_002184042.1| (precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404765|gb|EEC44711.1| precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 253/375 (67.47%), Postives = 299/375 (79.73%), Query Frame = 0
Query: 674 SDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIY-------CDDKGGNQYPPYIRMPDRTKS 1041
S S T DL+ F THNLDSAP S TATK+ELV+ LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+ +A + DSWITSYRCHC+AL+RG +V Q++ ELFG +G +GKGGSMHFY+K HNF+GGQGIVGAQVPVG GLAFAN+Y PGE M VAIA YGDGAANQGQIWE+ANM+ALWKLPMIFCIENN YGMGTSI+R SS + Y+ MGN IPG+R+DGMNV+AVREGM+F KEF GSGNGP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VKK L+++ + ++K EK+IRK VQ+ + KAK + PPL+EL K I+ CD ++YPP+IRMP+ KS
Sbjct: 35 STSDGTFDLTGCFQTHNLDSAPSESVTATKQELVDIFELMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVATGILNAFEPEDSWITSYRCHCIALARGGSVRQVVGELFGVIDGMSRGKGGSMHFYNKKHNFFGGQGIVGAQVPVGAGLAFANKYNAKPGEKMNVAIACYGDGAANQGQIWESANMSALWKLPMIFCIENNHYGMGTSIDRHSSISDYYKMGNSIPGLRIDGMNVLAVREGMRFAKEFCGSGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIAFTRSTRDPLEFVKKCLLDNEFIDEAEIKSTEKRIRKSVQEEVMKAKESTSPPLDELTKHIFATSLEPQCD----SEYPPHIRMPNYEKS 405
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|223995699|ref|XP_002287523.1| (pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335] >gi|220976639|gb|EED94966.1| pyruvate dehydrogenase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 543.117 bits (1398), Expect = 0.000e+0 Identity = 243/374 (64.97%), Postives = 305/374 (81.55%), Query Frame = 0
Query: 674 SDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLE-ELFKDIYCDDKGG--NQYPPYIRMPDRTKSRTF 1044
S + T DL+ +F+T+NLD+ P + TK+EL+ + LMYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+N+A D DSWITSYRCHC AL+RG +V ++ ELFG +G KGKGGSMHFY+K+HNF+GGQGIVGAQVPVG GLAFAN Y PG+ M VAIA YGDGAANQGQIWE+ANMA+LWKLPMIFCIENN YGMGTS++R SS++ Y+ MGN IPG+R+DGMNV+AV+EGM+FVK++VG+GNGP++VEM TYRYHGHSMSDPGTTYRNR+EI TRSTRDP+E+VK+ L++ +++KE+EK+IRK+V + +K+AKA S+P +E LF+ +Y D G N++PP+IRMPD KS+ +
Sbjct: 2 STDTATFDLTGSFETYNLDTQPNNTIEMTKDELLSHFELMYTMRRMEITCDNEYKARAIRGFCHLYDGQEAVATGINAAFDPEDSWITSYRCHCTALARGGSVASVLGELFGHVDGQTKGKGGSMHFYNKAHNFFGGQGIVGAQVPVGLGLAFANHYNATPGKPMQVAIACYGDGAANQGQIWESANMASLWKLPMIFCIENNHYGMGTSMDRHSSHSDYYKMGNHIPGVRIDGMNVLAVKEGMRFVKDYVGNGNGPMYVEMMTYRYHGHSMSDPGTTYRNREEIALTRSTRDPLEFVKRTLVDAGFTDAEEIKEIEKRIRKDVANQVKQAKASSKPTVEPHLFEYVYSSDGGKEQNEFPPHIRMPDFAKSKNY 375
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|953488684|emb|CEG47724.1| (pyruvate dehydrogenase (acetyl-transferring) e1 alpha subunit [Plasmopara halstedii]) HSP 1 Score: 525.783 bits (1353), Expect = 2.591e-174 Identity = 246/382 (64.40%), Postives = 292/382 (76.44%), Query Frame = 0
Query: 664 NATPPTAAFS----SDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKS 1041
+AT T AFS S + + S F+ H L+ PP A +EE+++Y LMYTMRRMEIT D EYK RTIRGFCHLYDGQEAVA GV +ALD NDSWITSYR HC+ L+RG TV+ I++ELFG G GKGGSMHFY+K NFYGGQGIVGAQVPVG GLAFA++Y MP AI M+GDGAANQGQ++EAANMAALWKLP+IFCIENNQYGMGTS +RSS+NT Y+T+GN+IPGI+ DG +V+AVRE KF+K++ G GNGP+FVEMNTYRYHGHSMSDPG TYRNRDEI Q R++RDPIE VKK +IE L + D++KE+EK++R EV A K AKA +P F D+Y D KG N YPP+IR PD TKS
Sbjct: 11 SATKATRAFSAATNSSNEAKFEFSMPFELHRLEQGPPEFAVTNREEMLDYYNLMYTMRRMEITNDNEYKARTIRGFCHLYDGQEAVATGVEAALDRNDSWITSYRNHCIMLARGGTVKDILAELFGMASGATGGKGGSMHFYNKKANFYGGQGIVGAQVPVGAGLAFASKYNHKGDGPMPCAITMFGDGAANQGQVFEAANMAALWKLPVIFCIENNQYGMGTSTKRSSNNTDYYTLGNKIPGIKCDGNDVLAVRECTKFMKKWCGEGNGPIFVEMNTYRYHGHSMSDPGVTYRNRDEISQMRASRDPIEMVKKRMIEAELATADEIKEIEKKVRAEVVKATKDAKAAGKPHESAAFTDVYTDGKGNNAYPPFIRFPDYTKS 392
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|1214711875|gb|OWZ22854.1| (Pyruvate dehydrogenase E1 component subunit alpha [Phytophthora megakarya]) HSP 1 Score: 517.694 bits (1332), Expect = 2.264e-171 Identity = 238/383 (62.14%), Postives = 292/383 (76.24%), Query Frame = 0
Query: 669 TAAFSSDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKGGNQYPPYIRMPDRTKSRTFAMGRPRR 1051
+AA ++ D S F+ H L+ P A +EE++ Y ++MYTMRRMEIT D EYK RTIRGFCHLYDGQEAVA GV +ALD DSWITSYR HC+ L+RG+ V+ +++ELFG K+G GKGGSMHFY K NFYGGQGIVGAQVPVG GLAFA++Y MP AI M+GDGA+NQGQ++EAANMAALWKLP+IFCIENN YGMGTS +RSS+NT Y+TMGN+IPGI+ DG +V+AVRE KF+K++ G GNGP+FVEMNTYRYHGHSMSDPG TYRNRDEI Q R++RDPIE VKK +IE L + D++KE+EK++R EV A K+AKA P + F D+Y D KG N+YPP+IR PD KS G+P++
Sbjct: 23 SAAANASGEAKFDFSMPFELHRLEQGPAEFAVTNREEMLGYYKMMYTMRRMEITNDNEYKARTIRGFCHLYDGQEAVATGVEAALDRKDSWITSYRNHCIMLARGAEVKDVLAELFGMKDGATGGKGGSMHFYKKEANFYGGQGIVGAQVPVGAGLAFASKYNHNGEGLMPCAITMFGDGASNQGQVFEAANMAALWKLPVIFCIENNHYGMGTSAQRSSNNTDYYTMGNKIPGIKCDGNDVLAVRECTKFLKQWCGEGNGPIFVEMNTYRYHGHSMSDPGVTYRNRDEISQMRASRDPIELVKKRMIEAELATADEIKEIEKKVRAEVVKATKEAKASGIPDVATAFTDVYTDGKGNNEYPPFIRFPDYAKS--LYNGKPQQ 403
BLAST of EWM29330.1 vs. NCBI_GenBank
Match: gi|1072231236|gb|OEU15969.1| (pyruvate dehydrogenase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 516.153 bits (1328), Expect = 4.005e-171 Identity = 241/373 (64.61%), Postives = 284/373 (76.14%), Query Frame = 0
Query: 674 SDSSITVDLSKAFDTHNLDSAPPTSATATKEELVEYLRLMYTMRRMEITCDTEYKTRTIRGFCHLYDGQEAVAVGVNSALDLNDSWITSYRCHCVALSRGSTVEQIISELFGFKEGTVKGKGGSMHFYSKSHNFYGGQGIVGAQVPVGTGLAFANRYKTPPGENMPVAIAMYGDGAANQGQIWEAANMAALWKLPMIFCIENNQYGMGTSIERSSSNTKYFTMGNRIPGIRMDGMNVVAVREGMKFVKEFVGSGNGPLFVEMNTYRYHGHSMSDPGTTYRNRDEIVQTRSTRDPIEWVKKNLIEHSLLSPDDVKEMEKQIRKEVQDALKKAKAGSQPPLEELFKDIYCDDKG--GNQYPPYIRMPDRTKSRTF 1044
S +S D+S +++ HN ++ PP + TKEELV MYTMRRMEITCD EYK R IRGFCHLYDGQEAVA G+ +AL DSW+TSYRCH +AL RG +V ++I ELFG G KGKGGSMH Y+K HNF+GG GIVGAQVPVGTGLAFAN+YK PGE M VAIA YGDGAANQGQIWE+ANMA LW LPMI+CIENN YGMGTSI+R SS + Y+ MGN IPG+R+DGMNV++V EGMKF KE+VG+GNGP++VEM TYRYHGHSMSDPGTTYRNRDEI TRS RDP+E VK L E +S +++KE EK+IRKEVQ + KAK + P +E+ DIY YPP++RMPD KS TF
Sbjct: 2 SSTSHAFDISGSYELHNFETGPPETTEVTKEELVNIFETMYTMRRMEITCDNEYKARNIRGFCHLYDGQEAVACGIQAALAPEDSWVTSYRCHVLALMRGGSVSEVIGELFGKAGGVTKGKGGSMHMYNKEHNFFGGHGIVGAQVPVGTGLAFANKYKAKPGEPMNVAIACYGDGAANQGQIWESANMANLWDLPMIYCIENNHYGMGTSIDRHSSISDYYKMGNAIPGLRIDGMNVLSVIEGMKFAKEYVGAGNGPIYVEMMTYRYHGHSMSDPGTTYRNRDEIEFTRSNRDPVEHVKSCLQEADFMSAEEIKETEKRIRKEVQKEVMKAKEWATPEYKEVATDIYAKSLTPYDGTYPPFVRMPDFAKSFTF 374 The following BLAST results are available for this feature:
BLAST of EWM29330.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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