EWM29337.1, cds1334 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|585111864|gb|EWM29337.1| (nad-dependent deacetylase [Nannochloropsis gaditana]) HSP 1 Score: 732.635 bits (1890), Expect = 0.000e+0 Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0 Query: 1 MPISNTIQTKSATKGMLRSDKAYYVLVLFLVAPLETMARARSAGCVILPAFNRMSTTTMSRLCADSQKLAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVPATTLEMFSDGDVDLENAVFEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVLEGAVQALLGSRVEQCEGK 354 MPISNTIQTKSATKGMLRSDKAYYVLVLFLVAPLETMARARSAGCVILPAFNRMSTTTMSRLCADSQKLAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVPATTLEMFSDGDVDLENAVFEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVLEGAVQALLGSRVEQCEGK Sbjct: 1 MPISNTIQTKSATKGMLRSDKAYYVLVLFLVAPLETMARARSAGCVILPAFNRMSTTTMSRLCADSQKLAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVPATTLEMFSDGDVDLENAVFEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVLEGAVQALLGSRVEQCEGK 354
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|551639942|ref|XP_005822778.1| (hypothetical protein GUITHDRAFT_118073 [Guillardia theta CCMP2712] >gi|428166829|gb|EKX35798.1| hypothetical protein GUITHDRAFT_118073 [Guillardia theta CCMP2712]) HSP 1 Score: 286.96 bits (733), Expect = 5.150e-92 Identity = 141/279 (50.54%), Postives = 192/279 (68.82%), Query Frame = 0 Query: 68 KLAEFLDGC--KNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQ-AALEELNQQWVRQNVPATTLEMFSDGDVDLENAVFEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVLEGAVQAL 343 KLA ++D C + IVA+TGAG+STESGIPDYRSP GS+S+G KP++H+ F++ R RYWARS G+ +RA+PN GH AL LE + I++QNVDGLHQ+AGS +VLDLHGRND + C+SCG ++ R+ F LE N++W+ + T EM +DGDV+L N+ FEDF VP CK CGG++KP VVF+GD+VP +A V A +LV G+S+ V SS+R V +A ++ PI +N G+TR +++ V HLKI + CG VLE V+ L Sbjct: 37 KLASWIDRCSSQRIVALTGAGVSTESGIPDYRSPNGSYSKGHKPIMHNRFMTSVNSRRRYWARSFFGWQPLARARPNLGHVALQRLEG-MKVFDHIVTQNVDGLHQKAGSVKVLDLHGRNDIVRCMSCGNRMSRQEFHDHHLEPANREWLSHHDHYFTAEMRADGDVNLTNSDFEDFHVPECKECGGIMKPDVVFFGDIVPKDKKDQASELVQGASGLLVIGSSVSVLSSFRLVQEAHRRKIPIAAINIGETRMDKQQVNHLKIHERCGPVLEKLVKLL 314
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|299471848|emb|CBN77018.1| (Sir2-type regulatory transcription factor silent information regulator protein [Ectocarpus siliculosus]) HSP 1 Score: 275.789 bits (704), Expect = 2.636e-85 Identity = 137/297 (46.13%), Postives = 190/297 (63.97%), Query Frame = 0 Query: 68 KLAEFLDGCK-NIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVP---------ATT-----------------LEMFSDGDVDLE-NAVFEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVL 336 +L E LD ++ A+TGAG+ST+SGIPDYR P GS+SRG KPM HDEF+S R RYWARS G+ FSRA+PN+ H ALA LE G + +I+QNVDGLHQ+AGS+ V++LHGRND++ C+SC + R +Q L +N +W+ ++ P ATT + + +DGD D+E A +F VP+C CGG+LKP VVF+GD +P V++ + VD ++ ++ AG+SL VYS++R V AA GK ++V+N G+TRAER G+ LK+E G VL Sbjct: 199 QLRELLDAAGGSVTALTGAGMSTDSGIPDYRGPKGSYSRGHKPMTHDEFLSSEDNRKRYWARSTFGWDSFSRARPNEAHVALAGLEA-AGKVDSVITQNVDGLHQKAGSRNVVNLHGRNDKVGCMSCRFESSRDAYQENLSRINARWIAKHSPDLEGTPAGVATTPGGTAVAKTARAGGDPDMRLRADGDADVEPGAYLGEFVVPACPRCGGILKPTVVFFGDNIPRQRVEDTYRIVDESELLIAAGSSLQVYSAYRLVKRAADAGKKVVVINLGETRAERSGLDILKVEAGVSNVL 494
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|873234776|emb|CEM01682.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 269.626 bits (688), Expect = 1.462e-84 Identity = 137/283 (48.41%), Postives = 193/283 (68.20%), Query Frame = 0 Query: 67 QKLAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWV--------RQNVPATTLEMFSDGDVDLENAV-FEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPH--LKIEKGCGEVLEG 338 ++L +FL + + +TGAG STESGIPDYR PTGS+SRG +P+ HDE+I P R RYWARSM GY F+ A+PN H ALA LE G + I++QNVD LHQ+AGS+ VLDLHGR+DR+VC++CG Q+ R+ FQ L LN++W+ QN+ A L +DGD +L++ V + F VP+C+ CGG+LKPAV+F+GDVV A+ ++ V+ A+ +LV G+SL V+S++R V A + P+ +VN+G TR EREG+ LK++ G +L+G Sbjct: 76 EQLYDFLRETQRLQVITGAGCSTESGIPDYRGPTGSYSRGHRPIQHDEYIFNPWSRQRYWARSMFGYGAFALAKPNDAHIALARLEA-AGAVEGIVTQNVDRLHQKAGSRNVLDLHGRSDRVVCMNCGHQLSRKAFQTQLLLLNERWIGRHGLGEELQNLDAHRLR--ADGDANLDDIVDYGSFTVPTCQRCGGMLKPAVIFFGDVVSPAIKRQVNKQVENAEGLLVVGSSLEVFSAYRLVKLALDREVPVAIVNKGVTRLEREGLGDMVLKLDARAGHILKG 355
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|1094466167|emb|SEI90636.1| (NAD-dependent protein deacetylase, SIR2 family [Frateuria terrea] >gi|1097494031|emb|SFP36409.1| NAD-dependent protein deacetylase, SIR2 family [Frateuria terrea]) HSP 1 Score: 263.077 bits (671), Expect = 3.959e-83 Identity = 137/268 (51.12%), Postives = 176/268 (65.67%), Query Frame = 0 Query: 69 LAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVPATTLEMFSDGDVDLENAVFEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVL 336 LA F+D + +TGAG ST+SGIPDYR G + R P+ F+ R RYWARS++G+ F +A+PN H AL LE G L L+++QNVDGLHQRAGS++V+DLHGR D++ C+ C + PR FQ LE LN WV A DGD DLE A F+DFAVP C ACGGVLKP VVF+G+ VP V +A A++AADA+LVAG+SLMV+S +RFV AA+ GKP+ VN G+TRA + + LK+E+ C E L Sbjct: 24 LARFIDTHPRLFVLTGAGCSTDSGIPDYRDADGGWKRT-PPVTFQAFMGGERTRRRYWARSLVGWRHFGQARPNGTHHALQRLEAS-GRLALLVTQNVDGLHQRAGSRQVIDLHGRLDQVRCMDCERRFPRDAFQHELERLNPAWV-----ALDATEAPDGDADLEAAHFDDFAVPPCPACGGVLKPDVVFFGENVPRGRVMDAMQALEAADAMLVAGSSLMVFSGYRFVHAAARAGKPVAAVNLGRTRA--DPLLSLKVEQPCAEAL 282
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|517801877|ref|WP_018972085.1| (hypothetical protein [Rudaea cellulosilytica]) HSP 1 Score: 259.225 bits (661), Expect = 1.394e-81 Identity = 133/275 (48.36%), Postives = 179/275 (65.09%), Query Frame = 0 Query: 62 LCADSQKLAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVPATTLEMFSDGDVDLENAVFEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVL 336 + A LA+F+ + +TGAGIST SGIPDYR G + R P+ + F++ R+RYWARS++G+ RF A+PN+ H ALA LEND G + +++QNVDGLHQ AGS+ V+DLHGR D + CL C +IPR FQ LE N W + A DGD DL+ F F VP+C ACGG+LKP VVF+G+ VP V++A+A + A+DA+LV G+SLMVYS +RF +AA+ GKPI +N+G+TRA + + LK+E C EVL Sbjct: 15 MTAPGTALADFVRAYPRLFVLTGAGISTASGIPDYRDLDGGWKRR-PPVTYQAFVADAATRARYWARSLIGWRRFGSARPNQAHAALARLEND-GRIEALVTQNVDGLHQSAGSRAVIDLHGRLDEVRCLQCERRIPREAFQRELEARNPAWRELDALAA-----PDGDADLDGMDFTSFDVPACTACGGMLKPDVVFFGENVPRERVEKAWAHLAASDAMLVVGSSLMVYSGFRFAREAARSGKPIAAINRGRTRA--DDLFALKVEGDCAEVL 280
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|918392649|ref|WP_052444924.1| (NAD-dependent deacetylase [Chromohalobacter japonicus]) HSP 1 Score: 257.684 bits (657), Expect = 6.069e-81 Identity = 136/288 (47.22%), Postives = 184/288 (63.89%), Query Frame = 0 Query: 66 SQKLAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVPATTLE--MFSDGDVDLENAVFEDFAVPSCKACG-GVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVLEGAVQALLGSRVEQ 350 + LA FL + +TGAG+ST+SGIPDYR G++ R PM H F+ R RYWARS++G+ S A+P + HRALAALE G + +++QNVDGLHQRAGS+RV+DLHG+ D + C+ CG R AAL LN QW T LE + DGD DL + F DF++ SC CG G+ KP VVF+GD VP + V AFAA++ ADA+LV G+SLMVYS +RF AA+ GKP+ +N G+TRA + + LK+E GE L+ A+++L G+ + + Sbjct: 6 ASSLATFLSRHSRLFVLTGAGMSTDSGIPDYRDEQGAWKRS-PPMTHQTFMHSDTARRRYWARSLVGFQALSEARPGRAHRALAALER-AGRIEQLVTQNVDGLHQRAGSRRVIDLHGQADVVRCMHCGATQMRHAVHAALARLNPQW-------TGLEASVGPDGDADLAHDDFGDFSLLSCARCGDGIFKPDVVFFGDSVPRSRVDAAFAALERADAMLVVGSSLMVYSGYRFARRAAESGKPMACINMGRTRA--DALFSLKVEASAGETLDAALRSLEGTMLTE 282
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|760149194|ref|WP_043830309.1| (NAD-dependent deacetylase [Roseomonas aerilata]) HSP 1 Score: 256.914 bits (655), Expect = 6.186e-81 Identity = 134/272 (49.26%), Postives = 171/272 (62.87%), Query Frame = 0 Query: 65 DSQKLAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVPATTLEMFSDGDVDLENAVFEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVL 336 D+ L +F+D + I +TGAG ST SGIPDYR G + R +PM F+ R RYWARS++G+ RFSR +PN+ H ALA LE G L+++QNVD LHQ AGS V+DLHGR DR+ C +CG IPR Q AL LN W + M DGD DL+ F FAVP C +C GVLKP VVF+G+ VP V+ A A++ ADA+LV G+SLMVYS +RFV AA+ GKP+ VN G+TRA + + LK+E+ C E L Sbjct: 6 DTAPLHDFIDRHRRIFVLTGAGCSTNSGIPDYRDAEGQWKRA-QPMTFQAFMGGEAARRRYWARSLIGWRRFSRVRPNRAHDALARLERS-GKSVLLLTQNVDRLHQAAGSSEVVDLHGRLDRVRCTACGEAIPREAMQEALTRLNPGWEEREA-----AMAPDGDADLDEEDFASFAVPPCPSCSGVLKPDVVFFGECVPKERVERAVGALEEADAMLVVGSSLMVYSGFRFVQAAARAGKPVAAVNLGRTRA--DPMLALKVEQPCAEAL 268
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|635570075|emb|CDQ34145.1| (NAD-dependent protein deacetylase [Virgibacillus halodenitrificans]) HSP 1 Score: 257.684 bits (657), Expect = 6.202e-81 Identity = 136/288 (47.22%), Postives = 184/288 (63.89%), Query Frame = 0 Query: 66 SQKLAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVPATTLE--MFSDGDVDLENAVFEDFAVPSCKACG-GVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVLEGAVQALLGSRVEQ 350 + LA FL + +TGAG+ST+SGIPDYR G++ R PM H F+ R RYWARS++G+ S A+P + HRALAALE G + +++QNVDGLHQRAGS+RV+DLHG+ D + C+ CG R AAL LN QW T LE + DGD DL + F DF++ SC CG G+ KP VVF+GD VP + V AFAA++ ADA+LV G+SLMVYS +RF AA+ GKP+ +N G+TRA + + LK+E GE L+ A+++L G+ + + Sbjct: 6 ASSLATFLSRHSRLFVLTGAGMSTDSGIPDYRDEQGAWKRS-PPMTHQTFMHSDTARRRYWARSLVGFQALSEARPGRAHRALAALER-AGRIEQLVTQNVDGLHQRAGSRRVIDLHGQADVVRCMHCGATQMRHAVHAALARLNPQW-------TGLEASVGPDGDADLAHDDFGDFSLLSCARCGDGIFKPDVVFFGDSVPRSRVDAAFAALERADAMLVVGSSLMVYSGYRFARRAAESGKPMACINMGRTRA--DALFSLKVEASAGETLDAALRSLEGTMLTE 282
BLAST of EWM29337.1 vs. NCBI_GenBank
Match: gi|951168627|ref|WP_057647763.1| (NAD-dependent deacetylase [Stenotrophomonas panacihumi] >gi|946985866|gb|KRG40415.1| NAD-dependent deacetylase [Stenotrophomonas panacihumi]) HSP 1 Score: 256.914 bits (655), Expect = 9.538e-81 Identity = 131/268 (48.88%), Postives = 179/268 (66.79%), Query Frame = 0 Query: 69 LAEFLDGCKNIVAVTGAGISTESGIPDYRSPTGSFSRGFKPMVHDEFISKPVKRSRYWARSMLGYHRFSRAQPNKGHRALAALENDVGTLGLIISQNVDGLHQRAGSKRVLDLHGRNDRIVCLSCGLQIPRRGFQAALEELNQQWVRQNVPATTLEMFSDGDVDLENAVFEDFAVPSCKACGGVLKPAVVFYGDVVPSAVVQEAFAAVDAADAVLVAGTSLMVYSSWRFVLDAAKKGKPILVVNQGQTRAEREGVPHLKIEKGCGEVL 336 L EF++ + + +TGAG ST SGIPDYR G + R +P+ + F+ + R RYWARS++G+ F +A+PN H ALA+LE G LGL+++QNVDGLHQ AGS++V+DLHGR D++ C+ C ++PR FQ ALE N +W + DGD DLE A F+DF VP+C CGGVLKP VVF+G+ VP V +A AA++ ADAVLV G+SLMVYS +RFV AA+ G P+ +N+G+TRA + + LK+E C + L Sbjct: 7 LREFIERHERLFVLTGAGCSTASGIPDYRDADGGWKRA-QPVTYQAFMGEAATRRRYWARSLVGWRHFGQARPNGTHHALASLEAQ-GRLGLLLTQNVDGLHQAAGSRQVIDLHGRLDQVRCMGCEARLPRADFQHALEAANPRWTLLDAGQA-----PDGDADLEQASFDDFVVPACPHCGGVLKPDVVFFGENVPRPRVADAQAALEHADAVLVVGSSLMVYSGFRFVQAAARAGLPVAALNRGRTRA--DDLLSLKVEHDCADAL 265 The following BLAST results are available for this feature:
BLAST of EWM29337.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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