EWM29341.1, cds1330 (CDS) Nannochloropsis gaditana

Overview
NameEWM29341.1
Unique Namecds1330
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:373257..375200 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29341.1
Producttubulin-specific chaperone
Orig transcript idgnl|cribi|Naga_100205g14.2993.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:373257..375200 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR001611Leu-rich_rpt
IPR000938CAP-Gly_domain
Homology
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|585111868|gb|EWM29341.1| (tubulin-specific chaperone [Nannochloropsis gaditana])

HSP 1 Score: 1303.89 bits (3373), Expect = 0.000e+0
Identity = 647/647 (100.00%), Postives = 647/647 (100.00%), Query Frame = 0
Query:    1 MPAVDALQDFSLGQRVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVTTAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEIPAGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKLEHPRWWPLMEQHGESVGGGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERDLKQEAREKESRETAARERMLAQAEEAERVERMRRREVAREKQSVVAAVDAGGIGVRGGGDEERL 647
            MPAVDALQDFSLGQRVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVTTAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEIPAGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKLEHPRWWPLMEQHGESVGGGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERDLKQEAREKESRETAARERMLAQAEEAERVERMRRREVAREKQSVVAAVDAGGIGVRGGGDEERL
Sbjct:    1 MPAVDALQDFSLGQRVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVTTAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEIPAGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKLEHPRWWPLMEQHGESVGGGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERDLKQEAREKESRETAARERMLAQAEEAERVERMRRREVAREKQSVVAAVDAGGIGVRGGGDEERL 647          
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|298712308|emb|CBJ33103.1| (putative: beta-tubulin folding cofactor E [Ectocarpus siliculosus])

HSP 1 Score: 401.749 bits (1031), Expect = 6.102e-128
Identity = 262/661 (39.64%), Postives = 362/661 (54.77%), Query Frame = 0
Query:   12 LGQRVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVTTAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGE-EEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQD----LGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEI--------------------------------PAGTVQTH-----GATHSALG--FQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKLEHPRWWPLMEQHGESVG-GGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPG-SLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERDLKQEAREKESRETAARERMLAQAEEAERVERMRRREVAREKQS 626
            +G RV D  G R TVRY+GPV +AK+P   W+GVE+DDP RGKHDG+V    G   R+F+C+  G    SFLKP K   G+S+   L ++YV  +APL AP  +  +AYA+TS+GG+K IEF+GE++IR RQQ+  L+  +LR   ++ AGE   + E A   V VDL+ NL SDW+E+G +A Q   LE L + SN+ +  +        G+   LRVL + SCG++SW+ V  + E  P L EL  A N +        L T+     +  +    F RL  LDLS T L  W D+VA    LP+L  L LN N + ++                                 AG    H     GA  S +   F AL A+ LS N +  W  +D L  LP L SLRF+GNP+T G+G  E+R   IAR+  + R+N SEV  +ERADAEK YLR + ++  + + S D  G+G     L++ E   +L   HPR+  L   HG+S+  GG G   G G  G GS+A  MV V L+S+A  S T  PV++KLP  SLTVG+LK LC+RLFKL+   Q LS + +P A  S L  DE+ L+Y     G E+ +NE D +Q+ R+KE        R+  Q   A+ +  +RR +VA++  S
Sbjct:   15 IGGRVVDGNGFRATVRYVGPVCTAKEPTTPWIGVEFDDPARGKHDGAVEKPDGSSLRYFTCVNGG--SGSFLKPGKFSTGISMAEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGESKIRRRQQVDTLDHCTLRECSISKAGELPALAEAAGAFVNVDLKANLLSDWQEVGLIASQTKLLEILSVGSNMFKTPDGVPPSLSSGACDRLRVLEITSCGITSWSQVAMLGEWAPSLEELYAADNNVSDVTAVVALPTSGNGHPSGEKGVGGFRRLIALDLSETELTSW-DQVACFSALPALSTLLLNHNRVTDVDLIVSTSSSTSAAAAESDGTNPGPVSGDQVEGDAGGKHCHNDGKGGAASSGIAPPFAALSAISLSGNRIGDWGAVDRLAGLPSLRSLRFSGNPVTSGLGASESRAACIARLPKVTRVNASEVGARERADAEKLYLRVLYKDLEKAQESEDKGGQG-----LTKGEAEQRLAERHPRYRELWALHGDSMAFGGRGA--GLGQQG-GSMAAGMVQVTLISLAAVSCTVEPVKKKLPASSLTVGKLKQLCKRLFKLDTDQQVLSHRPEPGALLSTLDDDEKTLSYFCVGDGSEVLVNEIDERQQERDKERARQEEEGRLAEQLRHADALTALRRGQVAQDTAS 664          
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|224003455|ref|XP_002291399.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973175|gb|EED91506.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 328.946 bits (842), Expect = 1.927e-100
Identity = 216/620 (34.84%), Postives = 329/620 (53.06%), Query Frame = 0
Query:   15 RVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVT-TAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMA-VLHKRYVVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVK---EEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEIPAGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREW----------GRRRGSGDGQGEGANEVMLSEEECIHQLKLEHPRWWPLMEQHGESVGGGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERDLKQEAREKESRETAARERMLAQAEEAERVERMRRRE 619
            RV D  G  GTV Y+GPVASAK     + G+ WDD  RGKHDGSV+  T  ++ RHF C   GPT  SFL+ +K+D GV+L   ++  RYV P A L AP+ +  +  A T+ G  K IEF GE +IR RQQ+  +E++SLR   ++    +E++   EE  HL  +DL GNL SDWE++  + RQ P+L+N+ + SN +  L + ++    G F  +R L LN+C +SS+ T+  + + +P L EL +A       DL            I   F  L  LDLS   L  WE+ +   + LP L +L LN N +      ++    + ++   F +L +L ++ N + SW+ LD LN +  L SLR    PLT  +G GE R   IAR  +L   N S +S +ER +AE+ Y+  VARE               G G     G +EV   + E   +    HPR+  LM +H +++   N    G  +SG G +  +++ V + SMA  S    P++++LP SL VG++K +C R F L+  +Q L  + +    P+ L   + +L Y G T G EI +NE D++ + RE+  +E   + R+  Q +    ++ M++ +
Sbjct:   13 RVRDPSGFIGTVLYVGPVASAKSTSEIYAGISWDDVTRGKHDGSVICRTTNQLVRHFKC---GPTQGSFLRLSKVDVGVALSPELMRSRYVKPGAELVAPDNILPHV-ARTAGGRDKAIEFWGEIKIRNRQQLEVVEEISLRMLGISGPCSKELQFEMEEFGHLRGIDLAGNLLSDWEDVLTILRQFPKLQNVSVASNRINDLGSTSS---IGEFPHIRSLNLNNCNISSFQTLRLIGKAMPNLEELCVAH-----ADLSDIEQHTPDTDTIEELFPNLILLDLSDCKLTSWENHIQPFRNLPMLESLILNLNAI-----DSIVVPESDNTRAPFPSLASLQIAGNPLPSWTALDDLNSITSLRSLRLRSTPLTNLLGVGEVRSTAIARFPSLEFFNASPISERERNEAERRYVSTVARELLLISSGALLSTNNNGLGTVDSSGDSEVDAKQAEVFAR----HPRFKHLMTKHKDTMMALNSSAAGTDSSGSGKIGEDVINVTIRSMAASSCDVEPLQKRLPRSLQVGRIKAMCARAFGLDIDLQILHFRIEGDPFPTELDDADHSLVYYGVTDGAEILVNEVDVEAQKRERARQEEDHKRRIEQQEQHVTVLQSMQKSD 611          
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|1072230419|gb|OEU15152.1| (L domain-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 321.627 bits (823), Expect = 7.538e-98
Identity = 205/616 (33.28%), Postives = 329/616 (53.41%), Query Frame = 0
Query:   12 LGQRVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVT-TAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHK-RYVVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVK-EEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEIP--AGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKLEH--PRWWPLMEQHGE-SVGGGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQ-APPSLLGTDEEALAYCGATSGCEIFMNERDLKQEAREKESRETAARERMLAQAEEAERVERMRRR 618
            L  R+ D +G  GTV Y G VAS+K+P   + G+ WDD  RGKHDGSV+     +I RHF+C   GPT  SFL+  KLD GV+L   L + +YV  +AP+ APN +  ++ A TS G +K IEF GE QIR  QQ+  + K+SLR E ++   +++    E  H+ E+DL GNL+ DWE++ ++  +   LE   L  N +R ++      +   F  +++L LN+C + S+ TV  + E +P L  L +A + +   +          + EI+  F +L++LD S  GL  W+++V+   TLP L +L+++EN ++ IP  AG           L F  L +L +S   + +W  L+ +N    L  LRF   PLT  +GQGE R + IAR   +  LN S +S KER +AE+ Y+  ++    ++  +   Q E  N++     EC +++K+ H  PR+  L E+H    +   NG++R +      +LA  +  + + SMA  S T  P+ R+LPG+L V ++K LC R++ ++  +  L    D +   P  +  D + L Y G   G EI ++E D    A + ++ +    +RM+        ++ +R R
Sbjct:   22 LYTRIRDTDGFVGTVVYTGSVASSKNPTEVYAGIVWDDHSRGKHDGSVICRKTNQIVRHFAC---GPTQGSFLRLRKLDLGVTLTTTLLRDKYVKMNAPIIAPNNLLPHS-AKTSSGREKSIEFLGELQIRKHQQLENIVKISLRREGISKVSDDDDDMAEFQHIKEIDLAGNLFCDWEQVFKIIHKFSCLEIFSLAHNYIRDIDEGI---VHLQFDKMKILNLNNCSIQSFGTVSRIAEMMPNLESLCVANSDISDIE----------KYEINNGFQKLRQLDCSRCGLDRWQNQVSKFATLPLLESLSIDENPILCIPLNAGM---------RLSFPRLLSLQISHTALSTWLDLEGINSFVSLKGLRFNSIPLTENLGQGEVRSISIARFPHIDYLNASRISQKERNEAERRYVTLISYSL-KKCNTLVEQNENGNDL---GGECSNRMKILHDNPRYLELAEKHKNLIIFSNNGMDRNE------NLATSIYNITIKSMAASSCTMDPIVRRLPGTLNVERMKALCSRIYDIDYDLICLRFITDKEDGLPVEMDDDCKTLDYYGLCDGAEILVDEIDFHARALDTKNNDKELEKRMMEMDRNISAMQNVRVR 601          
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|397569338|gb|EJK46684.1| (hypothetical protein THAOC_34637 [Thalassiosira oceanica])

HSP 1 Score: 313.538 bits (802), Expect = 6.542e-95
Identity = 221/612 (36.11%), Postives = 311/612 (50.82%), Query Frame = 0
Query:   15 RVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVT-TAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMA-VLHKRYVVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRG---ERVAWAGEEEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELR--GSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEIPAGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKLEHPRWWPLMEQHGESVGGGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERDLKQEAREKESRETAARERMLAQAEEAERVERMRRRE 619
            RV D  G  GTV Y+G VASAK+    + G+ WDD  RGKHDGSV+     ++ RHF C   GPT  SFL+ NK+D G  L   ++  RYV PDA L AP+ V  +  A T+ G  K IEFHGE +IR RQQ+  ++ +SLR     R    G EE++E  +HL  +DL GNL SDW+++  + +  P L++L L SN +  +     P L    S + L  L LNS  + S+ T+  + E +P L EL +A   L   D         A +     F  L+ LD+S   L  W + +  L  LP L +  LN+N +  I      +   T   L F AL +L L+   + SW  +D L+ LP L SLR    PLT  +G GE R   IAR+  L   N S V  +ER +AE+ Y+  VARE      + DG  +G             Q++  HPR+  LME H  ++   + V      S    +  ++V V + SMA GS    P+ +++P SL VG++K +C R F L+  +Q L  + D    P+ L  DE  LAY G T G EI +NE D++   RE+  R       +  Q      V+ M+R+E
Sbjct:   13 RVRDSSGFVGTVVYVGSVASAKNRNEIYAGISWDDATRGKHDGSVIDRDTNQLVRHFKC---GPTQGSFLRLNKVDLGCELTPQLMRSRYVEPDAELIAPDNVLPHV-ARTAGGRSKPIEFHGELKIRKRQQLEVVDAISLRMLGISRPCDGGSEELRE-FNHLKCIDLAGNLLSDWKDVVAITKSFPSLQSLSLASNRINDV----NPNLMIGTSMECLTTLNLNSTNICSFQTLRLLGEAIPNLEELCVAHCDLSDID---------AEASATMSFNNLELLDMSDCQLTSWGEHIMPLSRLPKLESFVLNDNPIESI------SFQETADGLDFVALASLQLAGTSIHSWKSVDELDKLPALRSLRLRNTPLTSSLGVGEVRSTTIARLPRLEYFNASPVPERERTEAERRYVSDVARELLLMSTADDGGADGKKR----------QVETRHPRFGALMEAHKSAMMASSSV-----TSLSQGIQDDVVGVTIRSMAAGSCDLEPLHKRIPRSLKVGRIKAMCSRAFALDVDLQILHFRVDGDPFPTELDDDEHTLAYFGVTDGAEILVNEIDVEAREREEARRREQHDRLVEEQESHIAVVQSMQRQE 585          
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|669163392|ref|XP_008617258.1| (hypothetical protein SDRG_12952 [Saprolegnia diclina VS20] >gi|530731042|gb|EQC29284.1| hypothetical protein SDRG_12952 [Saprolegnia diclina VS20])

HSP 1 Score: 273.478 bits (698), Expect = 1.751e-80
Identity = 202/579 (34.89%), Postives = 295/579 (50.95%), Query Frame = 0
Query:   11 SLGQRVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVTTAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVKEEASHLVEV-DLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEEC-VPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEI---PAGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKL--EHPRWWPLMEQHGESVGGGNGVERGDGA-SGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNE 581
            + G RV D EG RGT+RY GP+ S K  +A + G+EWDD  RGKHDG     AG + R+F+     PT  SF+ P K+ RGV  +  LH+RY+  +      + V       TS G  K I+  G  +I+ RQ +G + KVSL   R+A   E +V    +  +EV +L  NL   W E+  +A  +P+LE+L L+ N +   + PAT  +  +F  +  L+LN   L+ W  V  V     P L EL +A N L   DL        A + +  P + L+ +DLS   L DW      L  LPSL+ + LN N L  I   P+G+            F +L ++ +S NL+++WS +DALN LP L  LRFA NPL   +G GEAR +++AR   L   NGSE+  KER DAE+ YL+R+  E      + D                  QLK+   HPR+  L+ ++ +       +++      G  +LAR +V V  + M+  + T  P+E+KLP ++ VGQLKLL Q+ + LE A   LS ++  +     L  +   + Y G   G EI +N+
Sbjct:    3 AFGDRVQDAEGFRGTLRYAGPIHS-KGADAIYYGIEWDDASRGKHDGE----AGGV-RYFTT--AAPTSGSFVVPEKVVRGVGFLDALHERYMQAEV-----SDVRVAGEVGTSSGSSKSIQLVGVHKIQERQDLGVICKVSLESCRIARMPEPDVLRSMAPNIEVLNLGFNLLGSWREVLTLADALPKLEHLVLSGNRLA-FDVPATSNV--TFPFVTSLVLNQTNLT-WTDVQRVCSAHFPQLRELYVASNELTDADL-------LAAATLPWPTH-LELVDLSHNKLGDWSVLQQSLGALPSLQHVLLNGNALPAILPTPSGS------------FSSLVSISISDNLIDAWSSMDALNSLPSLELLRFAKNPLIAALGAGEARMIIVARCARLVAFNGSEIRAKERLDAEQMYLKRILHELASFPSTDD------------------QLKVASSHPRFDELVAKYPD-------IQKPQSERDGPAALARSLVAVTFLPMSINATTMDPMEKKLPLNMKVGQLKLLVQKKYGLEPAEHQLSFRSSKKGMSIPLDDEACDVGYYGLQDGAEILVND 519          
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|570958015|gb|ETP22994.1| (hypothetical protein F441_03801 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 268.855 bits (686), Expect = 2.960e-78
Identity = 195/600 (32.50%), Postives = 297/600 (49.50%), Query Frame = 0
Query:    6 ALQDFSLGQRVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVTTAGKIHRHFSCLKPGPTC-------------ASFLKPNKLDRGV---SLMAVLHKRY----VVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLK-TLPSLRALNLNENLLVEIPAGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKLEHPRWWPLMEQHGESVGGGNGVERGDGAS-GLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERD 583
            A+    +G RV D  G+ GT+RY+GPVA+AKD  A + G+EWDD GRGK+DGSV   +G+   HFS    GP C              SF K    D+     SL+  L +RY    +   + +EAP+ V       T+ G +K IEF G  ++  +Q +  +EK+SL G ++   G + + + A HL E+DL  NL+S W ++  + R++P LE L L+ N    ++         +F+ L+VL+LN   LS   T   +    P L +L L  N      L T +       E       L  LDLS   L+ W   +  +     +L  L LN N +V +              + FQ L+ L LS NL++SW+ +DALN  P + +LRF+ NPLT  M  GE R L++AR   +   N S V  KER +AE+ YL+R+  E       GD + E  +E +L+           HPR+  L E + E     +G   G G++ G   LA  ++ V ++ M+  + +  P+ +K+P  + V QLKLL +  F ++   Q LS + D ++ P LL  D   ++Y G   G E+ +N+ +
Sbjct:    2 AMSPVVVGDRVDDGSGSLGTIRYIGPVATAKDASALYYGIEWDDWGRGKNDGSVELPSGERVVHFS----GPPCRKLSGHGSPVSYKCSFAKATVFDKTAERSSLLQRLQERYSNEEMYSKSEVEAPSDVVVAGEVGTTLGSEKPIEFVGAKKLSTQQTLQTIEKISLSGCQIVELGGQGLGQLAPHLTELDLSRNLFSKWSDVLAIIRELPLLETLILSGNRFT-VDEENDNNGEENFENLKVLVLNQTLLSWRNTGTIITRHFPKLEQLHLVDNEYEDDQL-TEFKTTGGWVET------LSVLDLSLNRLKSWTKVLEIIGGMFVNLSQLFLNGNRIVTLVTDA--------KPIAFQKLKTLSLSENLIDSWTSIDALNAFPLMDTLRFSKNPLTTQMSLGETRMLVVARTDHIAVFNASPVREKERKEAEQLYLKRILHELAV---IGDDKSE--HERVLA----------AHPRFTRLRELYPEISIDQSGNTAGSGSTAGPRKLASSLLKVSIIPMSMQATSFDPLVKKIPQQMKVSQLKLLIETKFGVQVPAQVLSFRTDSRSMPMLLDDDNAEVSYYGMQDGSEVLVNDNE 566          
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|570333912|gb|ETO81860.1| (hypothetical protein F444_03898 [Phytophthora parasitica P1976])

HSP 1 Score: 268.085 bits (684), Expect = 6.428e-78
Identity = 194/596 (32.55%), Postives = 296/596 (49.66%), Query Frame = 0
Query:    6 ALQDFSLGQRVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVTTAGKIHRHFSCL---------KPGPTCASFLKPNKLDRGV---SLMAVLHKRY----VVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLK-TLPSLRALNLNENLLVEIPAGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKLEHPRWWPLMEQHGESVGGGNGVERGDGAS-GLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERD 583
            A+    +G RV D  G+ GT+RY+GPVA+AKD  A + G+EWDD GRGK+DGSV   +G+   HFS            P     SF K    D+     SL+  L +RY    +  ++ +EAP+ V       T+ G +K IEF G  ++  +Q +  +EK+SL G ++   G + + + A HL E+DL  NL+S W ++  + R++P LE L L+ N    ++         +F+ L+VL+LN   LS   T   +    P L +L L  N      L T +       E       L  LDLS   L+ W   +  +     +L  L LN N +V +              + FQ L+ L LS NL++SW+ +DALN  P + +LRF+ NPLT  M  GE R L++AR   +   N S V  KER +AE+ YL+R+  E       GD Q E  +E +L+           HPR+  L E + E     +G   G G++ G   LA  ++ V ++ M+  + +  P+ +K+P  + V QLKLL +  F ++   Q LS + D ++ P LL  D   ++Y G   G E+ +N+ +
Sbjct:    2 AMSPLVVGDRVDDGSGSLGTIRYIGPVATAKDASALYYGIEWDDWGRGKNDGSVELPSGERVVHFSGPPGRKLSGHGSPVSYKCSFAKATVFDKTAERSSLLQRLQERYSNEEMYSNSEVEAPSDVVVAGEVGTTLGSEKPIEFVGAKKLSTQQTLQTIEKISLSGCQIVELGGQGLGQLAPHLTELDLSRNLFSKWSDVLAIIRELPLLETLILSGNRFT-VDEENDNNGEENFENLKVLVLNQTLLSWRNTGTIITRHFPKLEQLHLVDNEYEDDQL-TEFKTTGGWVET------LSVLDLSLNRLKSWTKVLEIIGGMFVNLSQLFLNGNRIVTLVTDA--------KPIAFQKLKTLSLSENLIDSWTSIDALNAFPLMDTLRFSKNPLTTQMSLGETRMLVVARTDHIAVFNASPVREKERKEAEQLYLKRILHELAV---IGDDQSE--HERVLA----------AHPRFTRLRELYPEISIDQSGNTAGSGSTAGPRKLASSLLKVSIIPMSMQATSFDPLVKKIPQQMKVSQLKLLIETKFGVQVPAQVLSFRTDSRSMPMLLDDDNAEVSYYGMQDGSEVLVNDNE 566          
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|971515381|dbj|GAQ82810.1| (tubulin-specific chaperone E [Klebsormidium nitens])

HSP 1 Score: 268.47 bits (685), Expect = 7.822e-78
Identity = 199/629 (31.64%), Postives = 316/629 (50.24%), Query Frame = 0
Query:   10 FSLGQRV--ADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVTTAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVVPDAPLEAPNQVFENA--YANTSRGGQKKIEFHGETQIRARQ-QIGRLEKVSLRGERVAWAGEE-EVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSN-LMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEI-PAGTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKLEHPRWWPLMEQHG---ESVGGGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERDLKQEAREKESRETAARERMLAQAEEAERVERMRRREVAREKQSV 627
            F +GQR+  +D +G +GTVRY+GPVA     +  W+G+EWDD  RGKHDG     AG + ++F   +PG    S ++ +K+  G++L+  L  RY     P E   +  ++   Y  + R     +   G  +I+  Q ++ RL++ +L    V  AG+  E+   A ++ E+DL GNL   W  +G++  ++P+L  L+L+ N L   L+  AT      F  L  L+LN+ G++ WA+V  +   +  + EL L  N  G QD GT                 L+ LDL    +R WED V  L  L SL +L L+ N L ++      + HGA    L FQ L+ L L  N +  W+ +D+L+  P L  +R   NPLT   G   AR +LIAR+G L  LNGS +S +ER D+E  Y+R V  +          Q EG  +              EHPR+  L  ++G   E + GG   ++        SLA E+  + L  +APG+  + P+ +KLP S TV +L++ C++LF+++A  Q L    +    P+ + +DE+ L   G  S   I ++E D     +E+ + +     R+  Q ++ E    +++ EV +EK++V
Sbjct:   11 FQVGQRIRSSDADGFKGTVRYVGPVAGQ---QGTWIGIEWDDLERGKHDGE----AGGV-KYFHVEQPG--AGSLVRSHKIQAGITLVQALRARY----KPSEEAERTEDSKEMYIMSVRNRPMPVVLVGLDKIQQEQGRLERLQQAALIDAGVDSAGQPGEIGATAKNIEELDLTGNLLHSWTVIGQIVSELPKLRVLNLSRNRLTASLDNLATSSTAPVFSGLTTLVLNNSGIT-WASVTALGPSLSSIRELHLCGN--GIQDFGTGPIEN---------LPSLELLDLEDNKIRRWED-VLKLSALRSLTSLFLSGNELTDVRYLQASEAHGAPSGNLPFQGLQCLLLGRNQLSEWASIDSLDRFPSLQEVRLTDNPLTDARGGTAARYMLIARIGGLTCLNGSNISARERRDSEVRYVRHVIAQ----------QLEGKEDS-------------EHPRFEALKAKYGLVMEDLTGGPATQK--------SLADELCSLSLTCVAPGAGERAPIVKKLPASTTVARLRVFCEKLFRVKADRQRLFFTTEDSPHPTSIDSDEDTLGSLGFVSSATILIDEVDAASIRQEQAAAQADHERRLQQQLKQVELFTSLQKAEVEQEKRTV 581          
BLAST of EWM29341.1 vs. NCBI_GenBank
Match: gi|1210515257|dbj|GAX25818.1| (hypothetical protein FisN_17Lh223 [Fistulifera solaris])

HSP 1 Score: 267.7 bits (683), Expect = 1.644e-77
Identity = 208/614 (33.88%), Postives = 300/614 (48.86%), Query Frame = 0
Query:   15 RVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVT-TAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVL-HKRYVVPDAP-LEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPATPELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARNALGGQDLGTAWARRRARSEIHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEIPAG-TVQTHGATHSALGFQALEALDLSCNLVESWSCLDA-LNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGANEVMLSEEECIHQLKL-EHPRWWPLMEQHGESVGGGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADP-QAPPSLLGTDEEALAYCGATSGCEIFMNERDLKQEAREKESRETAARERMLAQAEE-AERVERMRRREV 620
            R+ D  G   TV Y+GPVASAKDP   + GV WDD  RGKHDGSVV  T G + RHF    P PT  SFL+  K+D GV L  +L  +RYV  ++  L AP+ +  +     S    K +EF GE +IR++QQ+  L  VSLR   ++   + E     +H  EVDL GNL  DW+++  +   +P L NL L  N +  +E P       S   L V       + S  +++ +    P L EL LA   +          R      + A F  L  LD +     D   +V     LP L +L+L++N L+E   G   + H        F +LE L L+    ++W  L   L+ LP+L+ LR    PL  G+G G AR + I  +  L+ LNGS ++  ER DA + ++R +     RR    + + + AN            LKL ++P++      H + V G   +   +G+S   +L   +V V + SMA  S T  P+ R+ P  LTVG+LK LC R F L+  +Q L  +A P Q  P+ + +DE  LAY G   G EI +NE D +    EK+  E    +R+  Q +E AE   R R  ++
Sbjct:   23 RIRDASGCTATVVYIGPVASAKDPTEIYCGVVWDDFSRGKHDGSVVDRTTGNLVRHFHA--PHPTSGSFLRIGKVDGGVELSPLLLRERYVTLNSDELVAPHNLLPHTVQTASGRNDKVVEFLGELKIRSQQQLEDLTTVSLRRWGISSVQKSESWSSLNHFTEVDLAGNLLFDWKDVATLLHVLPNLRNLSLACNRLGDVEFPDDMPQCLSLTHLNV---RQTEIKSVESIMALGYVFPHLQELSLADCPIQ--------CRSDDAKPLAAVFANLTFLDCTHCEF-DTNSQVLAWAFLPKLESLSLDDNPLLENWDGLDPEQH--------FSSLENLQLAGTGWKNWKELTVPLHHLPKLNRLRLRNCPLQNGLGSGGARMITIGHLPKLQMLNGSLITNSERKDAARWFVRTI-----RRMQQENQETDPANT----------SLKLDDNPQYIFWTTNHPDFVEGAQPISGSNGSS--KALIDSIVSVTIRSMAANSCTMEPLVRRFPADLTVGRLKALCSRYFGLDLDLQALHYRASPDQGFPTAMESDECTLAYYGVPDGAEILVNELDAEALNNEKQQAERNLIDRVQKQEKELAEFQTRQRHADI 597          
The following BLAST results are available for this feature:
BLAST of EWM29341.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111868|gb|EWM29341.1|0.000e+0100.00tubulin-specific chaperone [Nannochloropsis gadita... [more]
gi|298712308|emb|CBJ33103.1|6.102e-12839.64putative: beta-tubulin folding cofactor E [Ectocar... [more]
gi|224003455|ref|XP_002291399.1|1.927e-10034.84predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1072230419|gb|OEU15152.1|7.538e-9833.28L domain-like protein [Fragilariopsis cylindrus CC... [more]
gi|397569338|gb|EJK46684.1|6.542e-9536.11hypothetical protein THAOC_34637 [Thalassiosira oc... [more]
gi|669163392|ref|XP_008617258.1|1.751e-8034.89hypothetical protein SDRG_12952 [Saprolegnia dicli... [more]
gi|570958015|gb|ETP22994.1|2.960e-7832.50hypothetical protein F441_03801 [Phytophthora para... [more]
gi|570333912|gb|ETO81860.1|6.428e-7832.55hypothetical protein F444_03898 [Phytophthora para... [more]
gi|971515381|dbj|GAQ82810.1|7.822e-7831.64tubulin-specific chaperone E [Klebsormidium nitens... [more]
gi|1210515257|dbj|GAX25818.1|1.644e-7733.88hypothetical protein FisN_17Lh223 [Fistulifera sol... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1332rna1332Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications