EWM29383.1, cds1328 (CDS) Nannochloropsis gaditana

Overview
NameEWM29383.1
Unique Namecds1328
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:366540..366670 -
Alignment locationCM002457.1:366307..366469 -
Alignment locationCM002457.1:365966..366151 -
Alignment locationCM002457.1:365662..365862 -
Alignment locationCM002457.1:364850..365473 -
Alignment locationCM002457.1:364565..364742 -
Alignment locationCM002457.1:362367..364265 -
Alignment locationCM002457.1:362066..362316 -
Alignment locationCM002457.1:361838..361855 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29383.1
Productsignal recognition particle-docking protein FtsY
Orig transcript idgnl|cribi|Naga_100028g53.3319.mrna
GenePFtsY
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:366540..366670 -
CM002457.1supercontigCM002457.1:366307..366469 -
CM002457.1supercontigCM002457.1:365966..366151 -
CM002457.1supercontigCM002457.1:365662..365862 -
CM002457.1supercontigCM002457.1:364850..365473 -
CM002457.1supercontigCM002457.1:364565..364742 -
CM002457.1supercontigCM002457.1:362367..364265 -
CM002457.1supercontigCM002457.1:362066..362316 -
CM002457.1supercontigCM002457.1:361838..361855 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR005178Ostalpha/TMEM184C
IPR004390SR_rcpt_FtsY
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
IPR013822Signal_recog_particl_SRP54_hlx
IPR000897SRP54_GTPase_dom
Homology
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|585111911|gb|EWM29383.1| (signal recognition particle-docking protein FtsY [Nannochloropsis gaditana])

HSP 1 Score: 2506.86 bits (6496), Expect = 0.000e+0
Identity = 1216/1216 (100.00%), Postives = 1216/1216 (100.00%), Query Frame = 0
Query:    1 MLQYHLLLLPLLMLPWAGWTQAAFVTPRVGGPRSYGDGRKYRVGVPFYSSIDEVDSPIYTTASRSRRQGESHMMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEPDDVKSVLRLRLIEALTAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARLQDMVQGKLIKPKRGVIVRSEGGGGDKNMDADDISDRMRRKVQGRGGQGATRKSVSQLSSQQSEERRQVCRWARNSRLLDAQQHFFLPVSEERACEAMMKRDIVETDYDASDEDSDCDSQGEEGIVSGSRPCFCCQVADSQIKRVSGRPPRLLNFQQSLSRLAMISTYVCFIFLAVQQVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIRKLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYHATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFVSPIEPPYYKDPGSDAQDSFWEGEGALHRSLGGVEGGGPLNLMGDESPTDTVSLLKSGSAGTGEMRRGMTGAGKGTVPSFSAGQHAYQQNEGGALGRGSSVGGDGGHVSTIWSALWTSCVPMDVREDFKLATRQIMEDCACLKRGGGGAPGGVGLLWGPCRCRTRCGQAKAHRSSSSINVGGRESGIGKRMAGRHSSAAPASPSTVVLSLGGIGSAAGGASLRWKCMLLYACRRQRLVNGIIFLVTTIFLLTADARIARAEGNGNGTVAIRVRRAGSFSAKQLRRPFTPCRSNHLTAKYFQRLPNYGSLMC 1216
            MLQYHLLLLPLLMLPWAGWTQAAFVTPRVGGPRSYGDGRKYRVGVPFYSSIDEVDSPIYTTASRSRRQGESHMMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEPDDVKSVLRLRLIEALTAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARLQDMVQGKLIKPKRGVIVRSEGGGGDKNMDADDISDRMRRKVQGRGGQGATRKSVSQLSSQQSEERRQVCRWARNSRLLDAQQHFFLPVSEERACEAMMKRDIVETDYDASDEDSDCDSQGEEGIVSGSRPCFCCQVADSQIKRVSGRPPRLLNFQQSLSRLAMISTYVCFIFLAVQQVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIRKLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYHATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFVSPIEPPYYKDPGSDAQDSFWEGEGALHRSLGGVEGGGPLNLMGDESPTDTVSLLKSGSAGTGEMRRGMTGAGKGTVPSFSAGQHAYQQNEGGALGRGSSVGGDGGHVSTIWSALWTSCVPMDVREDFKLATRQIMEDCACLKRGGGGAPGGVGLLWGPCRCRTRCGQAKAHRSSSSINVGGRESGIGKRMAGRHSSAAPASPSTVVLSLGGIGSAAGGASLRWKCMLLYACRRQRLVNGIIFLVTTIFLLTADARIARAEGNGNGTVAIRVRRAGSFSAKQLRRPFTPCRSNHLTAKYFQRLPNYGSLMC
Sbjct:    1 MLQYHLLLLPLLMLPWAGWTQAAFVTPRVGGPRSYGDGRKYRVGVPFYSSIDEVDSPIYTTASRSRRQGESHMMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEPDDVKSVLRLRLIEALTAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARLQDMVQGKLIKPKRGVIVRSEGGGGDKNMDADDISDRMRRKVQGRGGQGATRKSVSQLSSQQSEERRQVCRWARNSRLLDAQQHFFLPVSEERACEAMMKRDIVETDYDASDEDSDCDSQGEEGIVSGSRPCFCCQVADSQIKRVSGRPPRLLNFQQSLSRLAMISTYVCFIFLAVQQVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIRKLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYHATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFVSPIEPPYYKDPGSDAQDSFWEGEGALHRSLGGVEGGGPLNLMGDESPTDTVSLLKSGSAGTGEMRRGMTGAGKGTVPSFSAGQHAYQQNEGGALGRGSSVGGDGGHVSTIWSALWTSCVPMDVREDFKLATRQIMEDCACLKRGGGGAPGGVGLLWGPCRCRTRCGQAKAHRSSSSINVGGRESGIGKRMAGRHSSAAPASPSTVVLSLGGIGSAAGGASLRWKCMLLYACRRQRLVNGIIFLVTTIFLLTADARIARAEGNGNGTVAIRVRRAGSFSAKQLRRPFTPCRSNHLTAKYFQRLPNYGSLMC 1216          
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|553184615|ref|XP_005854122.1| (transmembrane protein 184c [Nannochloropsis gaditana CCMP526] >gi|422294943|gb|EKU22243.1| transmembrane protein 184c [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 740.339 bits (1910), Expect = 0.000e+0
Identity = 361/413 (87.41%), Postives = 361/413 (87.41%), Query Frame = 0
Query:  544 MKRDIVETDYDASDEDSDCDSQGEEGIVSGSRPCFCCQVADSQIKRVSGRPPRLLNFQQSLSRLAMISTYVCFIFLAVQQVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIRKLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYHATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFVSPIEPPYYKDPGSDAQDSFWEGEGALHRSLGGVEGGGPLNLMGDESPTDT 956
            MKRDIVETDYDASDEDSDCDSQGEEGI                                                    QVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIRKLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYHATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFVSPIEPPYYKDPGSDAQDSFWEGEGALHRSLGGVEGGGPLNLMGDESPTDT
Sbjct:    1 MKRDIVETDYDASDEDSDCDSQGEEGI----------------------------------------------------QVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIRKLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYHATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFVSPIEPPYYKDPGSDAQDSFWEGEGALHRSLGGVEGGGPLNLMGDESPTDT 361          
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|553184609|ref|XP_005854120.1| (fused signal recognition particle receptor [Nannochloropsis gaditana CCMP526] >gi|422294941|gb|EKU22241.1| fused signal recognition particle receptor [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0
Identity = 352/355 (99.15%), Postives = 354/355 (99.72%), Query Frame = 0
Query:  108 DTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEPDDVKSVLRLRLIEALTAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARLQDMVQGKLIKPKRGVI 462
            ++ASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEPDDVKSVLRLRLIEALTAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARLQDMVQGKLIKPKRG I
Sbjct:    8 ESASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEPDDVKSVLRLRLIEALTAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARLQDMVQGKLIKPKRGTI 362          
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|298710297|emb|CBJ31918.1| (PFtsY, plastid signal recognition particle receptor [Ectocarpus siliculosus])

HSP 1 Score: 361.688 bits (927), Expect = 6.510e-109
Identity = 210/383 (54.83%), Postives = 268/383 (69.97%), Query Frame = 0
Query:   73 MMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE--KLEPDDVKSVLRLRLIEALTAK---------DRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEA 444
            +M+FDFI+KRA+EG++Q QN+ T    G+  EAL +T++YVK R        AK  +GLA+SR R +GDL+ +FG++  +  T    KLEE L+ +D+GA T+ +II+DLR  AKAE  +LEPDD+KSVLR  LI+ L            D +     + S G     P VLF +GANGMGKTTT+GK+ASRL+ +  Q VL+AA DTFRAAAV+QL EW  R+G DI  P +   +P  V+  A  KA+   YDVLIVDTSGRLSNN +LNEELK +K+ ++D IPG PH+TLLV+D +VGRN VDQA+ W +EVGI+ LV+TKLDGTARGG VVSIV D+GVPVKLIGVGE + DLRDF P  FVD+LLGY PE    L+A
Sbjct:   94 VMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRN-------AKFSDGLAQSRLRFVGDLENLFGMAGPLEETLE--KLEEALLQADLGATTSFQIIEDLRNTAKAEDRRLEPDDIKSVLRATLIQVLNGGTMPSAEGGGDTAAITFADPSLG----VPSVLFFMGANGMGKTTTVGKVASRLREDGGQKVLLAAADTFRAAAVEQLNEWAERSGADIVVPLDKDERPPSVVARAAEKAVSEGYDVLIVDTSGRLSNNYSLNEELKDMKKALSDRIPGAPHDTLLVVDASVGRNAVDQARTWKQEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLIGVGESLYDLRDFEPVLFVDSLLGYSPEDASRLQA 463          
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|873221813|emb|CEM32712.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 335.88 bits (860), Expect = 1.705e-99
Identity = 184/382 (48.17%), Postives = 258/382 (67.54%), Query Frame = 0
Query:   74 MVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEPDDVKSVLRLRLIEAL-TAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEG--------DYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARL 446
            M+ DFI+++A+E I ++  +                            ENL K QEGL+KSR RL+  L  +FG+  ++ L + L++LEE+L+ +DIG ATT +I+ DLR  A+ EK++P+D+K VLR +++E L    D+    +  ++         V  V+GANGMGKTTTIGK+A+RL+ E  + VLVAACDTFRAAAVDQLEEW  RA VDIHRP EG+T+P  V+E A+ +A+           YDV+IVDT+GRL+NNV LNEEL+K+ +  +  +P  P E LLV+D ++GRN V+QA++W  ++G+TGLV+TKLDGTAR G VVS+VRD+ +PVKL+GVGE ++DLRDF+ E++VDAL GY P+Q   LE R+
Sbjct:   73 MILDFIQRKAQEDIDKLSKVG---------------------------ENLQKFQEGLSKSRDRLLASLSGLFGMV-NLELEEALEQLEEILLSADIGTATTADILTDLRATARGEKIDPEDIKMVLRGKILEVLRMGTDKGETTESPSALRYSPDGLTVWMVMGANGMGKTTTIGKLAARLRGEGKR-VLVAACDTFRAAAVDQLEEWANRAQVDIHRPQEGETEPWKVVEAALDEALTPLPDESGRLPYDVMIVDTAGRLANNVDLNEELEKMVKVTSKRLPAAPAEILLVVDASIGRNAVEQARIWQEDIGVTGLVVTKLDGTARAGFVVSVVRDLNLPVKLVGVGEKLEDLRDFDAENYVDALFGYNPQQARLLEERM 425          
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|1210520001|dbj|GAX21145.1| (fused signal recognition particle receptor [Fistulifera solaris])

HSP 1 Score: 329.331 bits (843), Expect = 1.606e-97
Identity = 176/373 (47.18%), Postives = 251/373 (67.29%), Query Frame = 0
Query:   74 MVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIF-GVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKA--EKLEPDDVKSVLRLRLIEAL-TAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTI---------ADGIP----GGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVD 429
            MVFDF + R +EGI Q+ N+A   ++G+  + L D ASY  +R +  AE       GL+KSR R +  L+ +F G+  +    + + +LE+VL+ +D+G AT  +I+ +++ + ++  ++L  +D+ S++R +++EAL T + R +Q  ++ +       P VLF++GANGMGKTTTIGK+A RL+ E NQ+VLVAACDTFRA AV QL++W  RA VD+  P +    PA VL  A+ KA+   YD L+VDTSGRLSNN AL +EL K+KR I           G P      PHETLLV+D A GR  +D A+VWN+E+G+TGL++TKLDG+ARGG VV++ RD+ +PVKLIGVGEG++DLRDF P+ FVD
Sbjct:   38 MVFDFFKDRTKEGIDQLNNLAKSASQGQLGKGLADVASYTNERNKAFAE-------GLSKSRNRFLDRLEFLFTGIDPE----EMMQELEDVLLQADLGIATAEDIVQEVQSLRESSRQRLSREDLMSIMRGKILEALETEQSRMIQFSQDPN------LPTVLFILGANGMGKTTTIGKLAHRLRTEGNQTVLVAACDTFRAGAVAQLQQWADRAQVDLVGPTDTVKSPAAVLYSALDKAVLEKYDTLLVDTSGRLSNNEALTQELVKMKRVIQKRLSQQNNEKGFPIPNMNVPHETLLVIDAAQGRMALDSAQVWNKEIGLTGLILTKLDGSARGGSVVAVSRDLQLPVKLIGVGEGMEDLRDFEPDGFVD 393          
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|1210525736|dbj|GAX15342.1| (fused signal recognition particle receptor [Fistulifera solaris])

HSP 1 Score: 327.405 bits (838), Expect = 6.303e-97
Identity = 181/389 (46.53%), Postives = 259/389 (66.58%), Query Frame = 0
Query:   58 IYTTASRSRRQGESHMMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIF-GVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKA--EKLEPDDVKSVLRLRLIEAL-TAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTI---------ADG--IPGG--PHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVD 429
            +  T S S+ Q     MVFDF + R +EGI Q+ N+A   ++G+  + L D ASY  +R +  AE       GL+KSR R +  L+ +F G+  +    + + +LE++L+ +D+G AT  +I+ +++ + ++  ++L  +D+ S++R +++EAL T + R +Q  ++ +       P VLF++GANGMGKTTTIGK+A RL+ E NQ+VLVAACDTFRA AV QL++W  RA VDI  P +    PA VL  A+ KA+   YD L+VDTSGRLSNN AL +EL K+KR I          DG  +P    PHETLLV+D A GR  +D A+VWN+E+G+TGL++TKLDG+ARGG VV++ RD+ +PVKLIGVGEG++DLRDF P+ FVD
Sbjct:   23 VVVTPSSSKTQLN---MVFDFFKDRTKEGIDQLNNLAKSASQGQLGKGLADVASYTNERNKAFAE-------GLSKSRNRFLDRLEFLFTGIDPE----EMMQELEDILLQADLGIATAEDIVQEVQSLRESSRQRLSREDLMSIMRGKILEALETEQSRMIQFSQDPN------LPTVLFILGANGMGKTTTIGKLAHRLRIEGNQTVLVAACDTFRAGAVAQLQQWADRAQVDIVGPTDTVKSPAAVLYSALDKAVLEKYDTLLVDTSGRLSNNEALTQELVKMKRVIQKRLSQETNEDGNLVPNMNVPHETLLVIDAAQGRMALDSAQVWNKEIGLTGLILTKLDGSARGGSVVAVSRDLQLPVKLIGVGEGMEDLRDFEPDGFVD 391          
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|676395165|ref|XP_009040860.1| (hypothetical protein AURANDRAFT_32555 [Aureococcus anophagefferens] >gi|323448576|gb|EGB04473.1| hypothetical protein AURANDRAFT_32555 [Aureococcus anophagefferens])

HSP 1 Score: 323.553 bits (828), Expect = 4.154e-96
Identity = 185/369 (50.14%), Postives = 239/369 (64.77%), Query Frame = 0
Query:  102 FVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE-KLEPDDVKSVLRLRLIEALT-AKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAI----------------------EGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARL 446
            F +A  D  S+++++ + DA  LAK   GL KSR +   DL  IFG +    L  T+D LE+ L+ +DIGAATT  I++D+R VA+A  +    DV ++LR R+ E LT A D ++   ++A AG     P V+ VIGANGMGKTTTIGK+A RL+ E  Q VL+AACDTFRAAAV QL+EW  RA VDI  P  G   P+    +A+  A+                       G YDVLIVDTSGRLSNN ALNEELKK++RTI    PG PH+TLLV+D AVGRN VD A+ W  +VG++GL +TKLDGTAR G VVS+V D+G+PVKL+GVGE +DDLRDF+ + F+D+LL  +   V  L+ R 
Sbjct:    6 FQKASDDFGSFLEQKAKDDALALAKFTAGLEKSRDQFGKDLKAIFGGAAGANLDDTVDALEDALLSADIGAATTTTILEDVRAVAEARGEYAEADVTAILRGRMAETLTKAGDGAL---RKAPAG-----PTVILVIGANGMGKTTTIGKLARRLRVEGGQRVLLAACDTFRAAAVGQLDEWAKRAAVDIVVPDAGVESPSAACYKALDVALGVAAVDESFRHSDLADDDVDAPAGPYDVLIVDTSGRLSNNAALNEELKKIRRTIDKRAPGAPHDTLLVVDAAVGRNAVDMARAWQADVGVSGLAVTKLDGTARAGFVVSVVEDLGIPVKLVGVGEALDDLRDFDVDAFLDSLLDVDARSVDDLKQRF 366          
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|298714253|emb|CBJ27389.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 311.227 bits (796), Expect = 3.973e-90
Identity = 146/333 (43.84%), Postives = 218/333 (65.47%), Query Frame = 0
Query:  604 LSRLAMISTYVCFIFLAVQQVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIR-KLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYHATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTI-----------GELDSHS-AEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFV-SPIEPPYYKDPGSDAQ 922
            L+   ++  Y    +LA Q+VN+ L +  +K ++A T+GGA +  TVP++ +QI  HLSNFVEP+QQ+ ++R++ MVP Y++ ++ SLR+   SL+   VR+ YE+YVIY F+ +L+  +G        +L   P V+GRH+ PFCCL PW MG EFL+RC+ GV QY+ +RL +  +  AL+   LY EG++  +RG+ W+TV  C SQ+WALY+L+LFY AT+KEL+ I+P GKF ++K++VF SWWQ +LI ++  QG             G+L  H  +E VA+ IQDLLIC EM +AA+ F +AFP+SD++ SP +      P   A+
Sbjct:   67 LAWYMLLLVYAYLFWLAGQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQYVLIRLVSTAVALALQLGHLYTEGDFDPKRGYLWITVVTCCSQSWALYVLVLFYRATYKELVHIHPMGKFLAIKTIVFFSWWQGILIEILEGQGYFASVVGVSSGEGGDLSEHDPSEHVAQGIQDLLICLEMLVAAVFFFYAFPLSDYLKSPHDSQASPSPPRQAE 399          
BLAST of EWM29383.1 vs. NCBI_GenBank
Match: gi|546309433|ref|XP_005714040.1| (unnamed protein product [Chondrus crispus] >gi|507110457|emb|CDF34221.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 294.664 bits (753), Expect = 5.814e-86
Identity = 181/374 (48.40%), Postives = 240/374 (64.17%), Query Frame = 0
Query:   63 SRSRRQGESHMMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEAL--GDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEP-DDVKSVLRLRLIEALTAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLG 433
            +R  R+  + + VFDF+R+  +E             + K +EAL  G    YV+ + + D + + K+ +GL KSR+RL  DL  I        L + L++LEEVL+ SD+G  T  +I+DDLR  ++A++LE  +D+K+ L+  L+  L AK          +    +S P ++ VIGANGMGKTTTIGK+A+RL+ + + SVLVAACDTFRAAAVDQLEEW  RA VDI  P   Q  P+ VL  A+ KA EG YD LIVDTSGRL  N  L  EL+K+ R ++     GP ETLLV+D ++GRN V QA  W +EVG+T L +TKLDGTAR G VVS V ++ +PVKLIGVGE IDDLRDF+ E FVD L+G
Sbjct:   36 NRVARRLRTPLAVFDFVRRAGQE-------------QKKALEALREGKGIDYVRDKVKRDIDEVRKVNDGLKKSRERLARDLANIVQGGRIEELEEVLEELEEVLITSDLGVDTVDKILDDLRAESRAQRLEKREDIKNGLKKSLVRILEAKSNV-----GVALAKAESPPTIIMVIGANGMGKTTTIGKLAARLRQDGS-SVLVAACDTFRAAAVDQLEEWVRRADVDIVVPKPEQKSPSGVLFGAVEKAFEGKYDYLIVDTSGRLHTNANLMGELQKMVRVVSKFKENGPDETLLVVDASIGRNAVAQADTWKKEVGVTALAVTKLDGTARAGFVVSCVDELDIPVKLIGVGESIDDLRDFDAELFVDGLVG 390          
The following BLAST results are available for this feature:
BLAST of EWM29383.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111911|gb|EWM29383.1|0.000e+0100.00signal recognition particle-docking protein FtsY [... [more]
gi|553184615|ref|XP_005854122.1|0.000e+087.41transmembrane protein 184c [Nannochloropsis gadita... [more]
gi|553184609|ref|XP_005854120.1|0.000e+099.15fused signal recognition particle receptor [Nannoc... [more]
gi|298710297|emb|CBJ31918.1|6.510e-10954.83PFtsY, plastid signal recognition particle recepto... [more]
gi|873221813|emb|CEM32712.1|1.705e-9948.17unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210520001|dbj|GAX21145.1|1.606e-9747.18fused signal recognition particle receptor [Fistul... [more]
gi|1210525736|dbj|GAX15342.1|6.303e-9746.53fused signal recognition particle receptor [Fistul... [more]
gi|676395165|ref|XP_009040860.1|4.154e-9650.14hypothetical protein AURANDRAFT_32555 [Aureococcus... [more]
gi|298714253|emb|CBJ27389.1|3.973e-9043.84conserved unknown protein [Ectocarpus siliculosus][more]
gi|546309433|ref|XP_005714040.1|5.814e-8648.40unnamed protein product [Chondrus crispus] >gi|507... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1330rna1330Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications