EWM29379.1, cds1313 (CDS) Nannochloropsis gaditana

Overview
NameEWM29379.1
Unique Namecds1313
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:310061..310077 +
Alignment locationCM002457.1:310174..310214 +
Alignment locationCM002457.1:310294..310472 +
Alignment locationCM002457.1:310642..313475 +
Alignment locationCM002457.1:313600..313785 +
Alignment locationCM002457.1:313846..314005 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29379.1
Productwd repeat-containing protein 24
Orig transcript idgnl|cribi|Naga_100028g34.3315.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:310061..310077 +
CM002457.1supercontigCM002457.1:310174..310214 +
CM002457.1supercontigCM002457.1:310294..310472 +
CM002457.1supercontigCM002457.1:310642..313475 +
CM002457.1supercontigCM002457.1:313600..313785 +
CM002457.1supercontigCM002457.1:313846..314005 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|585111907|gb|EWM29379.1| (wd repeat-containing protein 24 [Nannochloropsis gaditana])

HSP 1 Score: 2329.29 bits (6035), Expect = 0.000e+0
Identity = 1138/1138 (100.00%), Postives = 1138/1138 (100.00%), Query Frame = 0
Query:    1 MVVLFSTSCGRHSDNALIKGVAADQILPPVVHAEHLRAMYFPSPPLTSPAQTLNENNELISSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAGEGAGNGSSHPSPGAQRQVQQQQQHEQLSRRPRPSGFFGNWGAVWGETFSQSKGQRAGLQEEMDGWTCLGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTSHERVDRSGAFLGLHGGKRRAQGLFDEEEGGGHPAGAQAEGKQGMDKDAGGRGKSTLQQPPNVRADAGRTSPSHPRRPLYTPSPLSTPFPSIPAAPPQPSKSVLQAPNIPSPSGARSADERPSPFPATGGDGGPGHGFGAGASVANKVFDVDDSCWRPRFLYRMEWDEDSEHTLAVARAIEGLSLLPDGRPGRMEKNKMDGKPKRHRVGRRLKGNGTESQVKPMQNDSVPSSSVSSSSHFADRIARLGKRYVLRPRGCLLPLQSVGTCCRAREDLCHYNAEVARLEGQWRMAHVWEMLGVILSGPGVGGKEGRGVSEDEDTGINFATGTHGHPMMDKEDSKGKRSGRKETRDKLSQEACMVGAVSTTSFPSVLLHGPLDTPTTSSTCLQLLRREILGHVVEELLEEGELQNCVALFEVIQSTGKALPGESLSDLIGFRPERVREIYVGYLELLQRLTLWEVANELVEHLEDRYIHGLYASNTNIYAAAERWSHNVPCASNLCEEFMCGVLAAGTAGISIISRNGSPPTRSAPRDVDIVVITEENECDGRERERRDSGFLHRVGIQGRVLPGCHGHELAVRIRVRACTIPREERGIRPWLLN 1138
            MVVLFSTSCGRHSDNALIKGVAADQILPPVVHAEHLRAMYFPSPPLTSPAQTLNENNELISSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAGEGAGNGSSHPSPGAQRQVQQQQQHEQLSRRPRPSGFFGNWGAVWGETFSQSKGQRAGLQEEMDGWTCLGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTSHERVDRSGAFLGLHGGKRRAQGLFDEEEGGGHPAGAQAEGKQGMDKDAGGRGKSTLQQPPNVRADAGRTSPSHPRRPLYTPSPLSTPFPSIPAAPPQPSKSVLQAPNIPSPSGARSADERPSPFPATGGDGGPGHGFGAGASVANKVFDVDDSCWRPRFLYRMEWDEDSEHTLAVARAIEGLSLLPDGRPGRMEKNKMDGKPKRHRVGRRLKGNGTESQVKPMQNDSVPSSSVSSSSHFADRIARLGKRYVLRPRGCLLPLQSVGTCCRAREDLCHYNAEVARLEGQWRMAHVWEMLGVILSGPGVGGKEGRGVSEDEDTGINFATGTHGHPMMDKEDSKGKRSGRKETRDKLSQEACMVGAVSTTSFPSVLLHGPLDTPTTSSTCLQLLRREILGHVVEELLEEGELQNCVALFEVIQSTGKALPGESLSDLIGFRPERVREIYVGYLELLQRLTLWEVANELVEHLEDRYIHGLYASNTNIYAAAERWSHNVPCASNLCEEFMCGVLAAGTAGISIISRNGSPPTRSAPRDVDIVVITEENECDGRERERRDSGFLHRVGIQGRVLPGCHGHELAVRIRVRACTIPREERGIRPWLLN
Sbjct:    1 MVVLFSTSCGRHSDNALIKGVAADQILPPVVHAEHLRAMYFPSPPLTSPAQTLNENNELISSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAGEGAGNGSSHPSPGAQRQVQQQQQHEQLSRRPRPSGFFGNWGAVWGETFSQSKGQRAGLQEEMDGWTCLGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTSHERVDRSGAFLGLHGGKRRAQGLFDEEEGGGHPAGAQAEGKQGMDKDAGGRGKSTLQQPPNVRADAGRTSPSHPRRPLYTPSPLSTPFPSIPAAPPQPSKSVLQAPNIPSPSGARSADERPSPFPATGGDGGPGHGFGAGASVANKVFDVDDSCWRPRFLYRMEWDEDSEHTLAVARAIEGLSLLPDGRPGRMEKNKMDGKPKRHRVGRRLKGNGTESQVKPMQNDSVPSSSVSSSSHFADRIARLGKRYVLRPRGCLLPLQSVGTCCRAREDLCHYNAEVARLEGQWRMAHVWEMLGVILSGPGVGGKEGRGVSEDEDTGINFATGTHGHPMMDKEDSKGKRSGRKETRDKLSQEACMVGAVSTTSFPSVLLHGPLDTPTTSSTCLQLLRREILGHVVEELLEEGELQNCVALFEVIQSTGKALPGESLSDLIGFRPERVREIYVGYLELLQRLTLWEVANELVEHLEDRYIHGLYASNTNIYAAAERWSHNVPCASNLCEEFMCGVLAAGTAGISIISRNGSPPTRSAPRDVDIVVITEENECDGRERERRDSGFLHRVGIQGRVLPGCHGHELAVRIRVRACTIPREERGIRPWLLN 1138          
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367981|emb|CCI43836.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 248.44 bits (633), Expect = 3.354e-65
Identity = 136/356 (38.20%), Postives = 200/356 (56.18%), Query Frame = 0
Query:   61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADS 416
            SS+R +V   + S  S ++   PLN ++++  P       AVGG  +L+I+ +  +G + K NLR      S +NFS +D+ W  +  S  LLA  A+NG +++W++     +  QERV+  H R VNRI WHP +  LL+S SQD +IKLWD+RG+       YQPR+E+VRDV++   +P+ FAAA E+G +Q+WD R+   P  K   H GLVL+++WH     I+A+G RDR VK+WDLSD        +                            I T+++V R+ WRP    Q+AT++S+  DN IH+WD  RP +PLA+  GH D+    +WLDTP+     S A+S
Sbjct:    3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNLQKDGYKHVQERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQANS 318          
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367986|emb|CCI43841.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 248.054 bits (632), Expect = 5.167e-65
Identity = 136/356 (38.20%), Postives = 200/356 (56.18%), Query Frame = 0
Query:   61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADS 416
            SS+R +V   + S  S ++   PLN ++++  P       AVGG  +L+I+ +  +G + K NLR      S +NFS +D+ W  +  S  LLA  A+NG +++W++     +  QERV+  H R VNRI WHP +  LL+S SQD +IKLWD+RG+       YQPR+E+VRDV++   +P+ FAAA E+G +Q+WD R+   P  K   H GLVL+++WH     I+A+G RDR VK+WDLSD        +                            I T+++V R+ WRP    Q+AT++S+  DN IH+WD  RP +PLA+  GH D+    +WLDTP+     S A+S
Sbjct:    3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNLQKDGYKHVQERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQANS 318          
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367984|emb|CCI43839.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 247.284 bits (630), Expect = 1.056e-64
Identity = 138/364 (37.91%), Postives = 202/364 (55.49%), Query Frame = 0
Query:   61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAG 424
            SS+R +V   + S  S ++   PLN ++++  P       AVGG  +L+I+ +  +G + K NLR      S +NFS +D+ W  +  S  LLA  A+NG +++W++     +  QERV+  H R VNRI WHP +  LL+S SQD +IKLWD+RG+       YQPR+E+VRDV++   +P+ FAAA E+G +Q+WD R+   P  K   H GLVL+++WH     I+A+G RDR VK+WDLSD        +                            I T+++V R+ WRP    Q+AT++S+  DN IH+WD  RP +PLA+  GH D+    +WLDTP+     S A +   ED  G
Sbjct:    3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNLQKDGYKHVQERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQAST---EDSGG 323          
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|673049377|ref|XP_008878649.1| (hypothetical protein H310_13067 [Aphanomyces invadans] >gi|574465577|gb|ETV92613.1| hypothetical protein H310_13067 [Aphanomyces invadans])

HSP 1 Score: 240.35 bits (612), Expect = 8.484e-63
Identity = 132/328 (40.24%), Postives = 187/328 (57.01%), Query Frame = 0
Query:   78 IELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTP 405
            ++   PLN +SV+          AVGG  +LKI+++ P G   K NLR      S +NFS +D+ W     S ++LA  A+NG ++LWD+ ++     Q+R   AH R VNRI WHP +  LLLSASQD  IKLWD+R +       +Q ++E+VRDV++H  +   FAAA E+GSV++WD R  + P  K   H G +L+L+WH T+  ++ATG+RDR+VK+WDLSD S                             S+ + LI   +   RI+WRP Y   +AT+SS+  D+ I+VWDV RP++PLA   GH D+   F W DTP
Sbjct:   13 MDFSGPLNAVSVSH----SQKLIAVGGRDVLKIVSLEPTGFVEKKNLR---SAKSNLNFSTNDIRW--HPQSDSVLATAATNGFLVLWDVQHK----LQKREYKAHDRAVNRICWHPTDPNLLLSASQDGLIKLWDQRNKGIPTTVFHQQKSESVRDVKFHVFEDTKFAAAFENGSVEIWDLRNHKQPETKFTAHQGHILSLDWHPTKGRVIATGSRDRSVKIWDLSDAS-------------------------KPFTSQTIALI---ANAGRIQWRPDYADHIATSSSIT-DSRINVWDVQRPFVPLACLHGHADIVSDFQWFDTP 298          
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|953499829|emb|CEG38470.1| (hypothetical protein, variant [Plasmopara halstedii])

HSP 1 Score: 240.35 bits (612), Expect = 8.831e-62
Identity = 126/334 (37.72%), Postives = 187/334 (55.99%), Query Frame = 0
Query:   78 IELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWG 411
            +E   PLN +S++          AVGG  +LK++ +   G   K NLR+  K +  +NFS +D+ W     S  LLA  A+NG +++W++     +  QERV+  H R VNRI WH  +  +L+S SQD ++KLWD+RG       TYQP++E+VRDV+  P  P+ FAAA E+G VQ+WD R+   P  K   H GLVL+++WH T+  +LA+G RDR VK+W L D                                     I T+++V R+ WRP +   +AT++S+  DN+IHVWD+ RP++P+A+ +GH D+     W+DTP  P +G
Sbjct:   13 MEFNGPLNALSLS----PNNRLVAVGGRDVLKVVALEASGFTEKRNLRVVGKPS--LNFSTNDIRW--HPHSDYLLATAATNGAVVIWNLEREGYKYVQERVLNGHRRAVNRICWHTSDWNILISGSQDGTVKLWDKRGG--KVMLTYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNAQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVKIWGLRDVRQPKQT------------------------------IQTIASVGRVAWRPTFVTHIATSASLV-DNSIHVWDIKRPFIPIASMKGHSDIASGISWMDTPMSPNFG 305          
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367987|emb|CCI43842.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 238.424 bits (607), Expect = 9.097e-62
Identity = 137/372 (36.83%), Postives = 200/372 (53.76%), Query Frame = 0
Query:   61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPS----------------QERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADS 416
            SS+R +V   + S  S ++   PLN ++++  P       AVGG  +L+I+ +  +G + K NLR      S +NFS +D+ W     S  LLA  A+NG +++W++  +DG                    ERV+  H R VNRI WHP +  LL+S SQD +IKLWD+RG+       YQPR+E+VRDV++   +P+ FAAA E+G +Q+WD R+   P  K   H GLVL+++WH     I+A+G RDR VK+WDLSD        +                            I T+++V R+ WRP    Q+AT++S+  DN IH+WD  RP +PLA+  GH D+    +WLDTP+     S A+S
Sbjct:    3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRW--HPQSNHLLATAATNGVVVIWNL-QKDGYKHVQGTFCDRNRHCIDSVSERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQANS 333          
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|698792892|ref|XP_009829478.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574116135|gb|ETV81620.1| hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 232.261 bits (591), Expect = 1.018e-61
Identity = 130/346 (37.57%), Postives = 196/346 (56.65%), Query Frame = 0
Query:   78 IELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQP-RAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDG 422
            ++   PLN +SV+          AVGG  +LKI+ +   G   K NLR +    S +NFS +D+ W     S ++LA  A+NG ++LWD+ ++     Q+R + AH R VNRI WHP +   LLSASQD  IKLWD+R +   C A +Q  ++E+VRDV+++  +   FAAA E+GSV++WD R  + P  K   H G +L+++WH ++  ++ATG+RDR+VK+WDLSD +                             S+ + LI   +   RI+WRP     +AT+SS+  D+ I+VWD+ RP++PLA  +GH D+   F W DTP +  +G   D++   DG
Sbjct:   13 MDFSGPLNAVSVSH----AQKLIAVGGRDVLKIVALETTGFVEKKNLRSS---KSNLNFSTNDIRW--HPQSDSMLATAATNGFLVLWDVQHK----VQKREVKAHDRAVNRICWHPTDPNSLLSASQDGLIKLWDQRHKGV-CTAVFQQQKSESVRDVKFNLFEDTRFAAAFENGSVEIWDVRNNKQPETKFTAHQGHILSIDWHPSKARVIATGSRDRSVKIWDLSDPA-------------------------KPATSQTIALI---ANAGRIQWRPDCEDHIATSSSI-TDSRINVWDIQRPFVPLACLQGHADIVSDFEWFDTPLVQSFGGATDTSLDYDG 315          

HSP 2 Score: 65.0846 bits (157), Expect = 6.194e-7
Identity = 40/151 (26.49%), Postives = 70/151 (46.36%), Query Frame = 0
Query:  468 WGET-FSQSKGQRAGLQEEMDGWTCLGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTSHERVDRSGAFLGLHGGKRRAQGLFDEEEGGGHPAGAQAEGKQGMDKDAGGRGKSTLQQPPNVRADAGRTSPSHPRRPLY 617
            W +T   QS G       + DG+     W+H+++C++D  + LHSLA+A +PH T+    +++++ G +++SH+ +DRS   L +H           + E   +P  + +     M            Q PP     A   +PS PR P +
Sbjct:  294 WFDTPLVQSFGGATDTSLDYDGFR---YWQHVVACSKDKTLKLHSLAEAVKPHQTMHAVALAMNISGHVVSSHDEIDRSCTSLLIH-----------QHESSVNPIFSVSNNSLNM------------QHPPRKVKSAANLAPSMPRIPSF 418          
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367982|emb|CCI43837.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 238.039 bits (606), Expect = 1.541e-61
Identity = 137/372 (36.83%), Postives = 201/372 (54.03%), Query Frame = 0
Query:   61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPS----------------QERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADS 416
            SS+R +V   + S  S ++   PLN ++++  P       AVGG  +L+I+ +  +G + K NLR      S +NFS +D+ W  +  S  LLA  A+NG +++W++  +DG                    ERV+  H R VNRI WHP +  LL+S SQD +IKLWD+RG+       YQPR+E+VRDV++   +P+ FAAA E+G +Q+WD R+   P  K   H GLVL+++WH     I+A+G RDR VK+WDLSD        +                            I T+++V R+ WRP    Q+AT++S+  DN IH+WD  RP +PLA+  GH D+    +WLDTP+     S A+S
Sbjct:    3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNLQ-KDGYKHVQGTFCDRNRHCIDSVSERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQANS 333          
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367983|emb|CCI43838.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 237.654 bits (605), Expect = 1.695e-61
Identity = 139/380 (36.58%), Postives = 203/380 (53.42%), Query Frame = 0
Query:   61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPS----------------QERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAG 424
            SS+R +V   + S  S ++   PLN ++++  P       AVGG  +L+I+ +  +G + K NLR      S +NFS +D+ W  +  S  LLA  A+NG +++W++  +DG                    ERV+  H R VNRI WHP +  LL+S SQD +IKLWD+RG+       YQPR+E+VRDV++   +P+ FAAA E+G +Q+WD R+   P  K   H GLVL+++WH     I+A+G RDR VK+WDLSD        +                            I T+++V R+ WRP    Q+AT++S+  DN IH+WD  RP +PLA+  GH D+    +WLDTP+     S A +   ED  G
Sbjct:    3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNL-QKDGYKHVQGTFCDRNRHCIDSVSERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQAST---EDSGG 338          
The following BLAST results are available for this feature:
BLAST of EWM29379.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111907|gb|EWM29379.1|0.000e+0100.00wd repeat-containing protein 24 [Nannochloropsis g... [more]
gi|635367981|emb|CCI43836.1|3.354e-6538.20unnamed protein product [Albugo candida][more]
gi|635367986|emb|CCI43841.1|5.167e-6538.20unnamed protein product [Albugo candida][more]
gi|635367984|emb|CCI43839.1|1.056e-6437.91unnamed protein product [Albugo candida][more]
gi|673049377|ref|XP_008878649.1|8.484e-6340.24hypothetical protein H310_13067 [Aphanomyces invad... [more]
gi|953499829|emb|CEG38470.1|8.831e-6237.72hypothetical protein, variant [Plasmopara halstedi... [more]
gi|635367987|emb|CCI43842.1|9.097e-6236.83unnamed protein product [Albugo candida][more]
gi|698792892|ref|XP_009829478.1|1.018e-6137.57hypothetical protein, variant 2 [Aphanomyces astac... [more]
gi|635367982|emb|CCI43837.1|1.541e-6136.83unnamed protein product [Albugo candida][more]
gi|635367983|emb|CCI43838.1|1.695e-6136.58unnamed protein product [Albugo candida][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1315rna1315Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications