EWM29379.1, cds1313 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|585111907|gb|EWM29379.1| (wd repeat-containing protein 24 [Nannochloropsis gaditana]) HSP 1 Score: 2329.29 bits (6035), Expect = 0.000e+0 Identity = 1138/1138 (100.00%), Postives = 1138/1138 (100.00%), Query Frame = 0
Query: 1 MVVLFSTSCGRHSDNALIKGVAADQILPPVVHAEHLRAMYFPSPPLTSPAQTLNENNELISSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAGEGAGNGSSHPSPGAQRQVQQQQQHEQLSRRPRPSGFFGNWGAVWGETFSQSKGQRAGLQEEMDGWTCLGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTSHERVDRSGAFLGLHGGKRRAQGLFDEEEGGGHPAGAQAEGKQGMDKDAGGRGKSTLQQPPNVRADAGRTSPSHPRRPLYTPSPLSTPFPSIPAAPPQPSKSVLQAPNIPSPSGARSADERPSPFPATGGDGGPGHGFGAGASVANKVFDVDDSCWRPRFLYRMEWDEDSEHTLAVARAIEGLSLLPDGRPGRMEKNKMDGKPKRHRVGRRLKGNGTESQVKPMQNDSVPSSSVSSSSHFADRIARLGKRYVLRPRGCLLPLQSVGTCCRAREDLCHYNAEVARLEGQWRMAHVWEMLGVILSGPGVGGKEGRGVSEDEDTGINFATGTHGHPMMDKEDSKGKRSGRKETRDKLSQEACMVGAVSTTSFPSVLLHGPLDTPTTSSTCLQLLRREILGHVVEELLEEGELQNCVALFEVIQSTGKALPGESLSDLIGFRPERVREIYVGYLELLQRLTLWEVANELVEHLEDRYIHGLYASNTNIYAAAERWSHNVPCASNLCEEFMCGVLAAGTAGISIISRNGSPPTRSAPRDVDIVVITEENECDGRERERRDSGFLHRVGIQGRVLPGCHGHELAVRIRVRACTIPREERGIRPWLLN 1138
MVVLFSTSCGRHSDNALIKGVAADQILPPVVHAEHLRAMYFPSPPLTSPAQTLNENNELISSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAGEGAGNGSSHPSPGAQRQVQQQQQHEQLSRRPRPSGFFGNWGAVWGETFSQSKGQRAGLQEEMDGWTCLGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTSHERVDRSGAFLGLHGGKRRAQGLFDEEEGGGHPAGAQAEGKQGMDKDAGGRGKSTLQQPPNVRADAGRTSPSHPRRPLYTPSPLSTPFPSIPAAPPQPSKSVLQAPNIPSPSGARSADERPSPFPATGGDGGPGHGFGAGASVANKVFDVDDSCWRPRFLYRMEWDEDSEHTLAVARAIEGLSLLPDGRPGRMEKNKMDGKPKRHRVGRRLKGNGTESQVKPMQNDSVPSSSVSSSSHFADRIARLGKRYVLRPRGCLLPLQSVGTCCRAREDLCHYNAEVARLEGQWRMAHVWEMLGVILSGPGVGGKEGRGVSEDEDTGINFATGTHGHPMMDKEDSKGKRSGRKETRDKLSQEACMVGAVSTTSFPSVLLHGPLDTPTTSSTCLQLLRREILGHVVEELLEEGELQNCVALFEVIQSTGKALPGESLSDLIGFRPERVREIYVGYLELLQRLTLWEVANELVEHLEDRYIHGLYASNTNIYAAAERWSHNVPCASNLCEEFMCGVLAAGTAGISIISRNGSPPTRSAPRDVDIVVITEENECDGRERERRDSGFLHRVGIQGRVLPGCHGHELAVRIRVRACTIPREERGIRPWLLN
Sbjct: 1 MVVLFSTSCGRHSDNALIKGVAADQILPPVVHAEHLRAMYFPSPPLTSPAQTLNENNELISSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAGEGAGNGSSHPSPGAQRQVQQQQQHEQLSRRPRPSGFFGNWGAVWGETFSQSKGQRAGLQEEMDGWTCLGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTSHERVDRSGAFLGLHGGKRRAQGLFDEEEGGGHPAGAQAEGKQGMDKDAGGRGKSTLQQPPNVRADAGRTSPSHPRRPLYTPSPLSTPFPSIPAAPPQPSKSVLQAPNIPSPSGARSADERPSPFPATGGDGGPGHGFGAGASVANKVFDVDDSCWRPRFLYRMEWDEDSEHTLAVARAIEGLSLLPDGRPGRMEKNKMDGKPKRHRVGRRLKGNGTESQVKPMQNDSVPSSSVSSSSHFADRIARLGKRYVLRPRGCLLPLQSVGTCCRAREDLCHYNAEVARLEGQWRMAHVWEMLGVILSGPGVGGKEGRGVSEDEDTGINFATGTHGHPMMDKEDSKGKRSGRKETRDKLSQEACMVGAVSTTSFPSVLLHGPLDTPTTSSTCLQLLRREILGHVVEELLEEGELQNCVALFEVIQSTGKALPGESLSDLIGFRPERVREIYVGYLELLQRLTLWEVANELVEHLEDRYIHGLYASNTNIYAAAERWSHNVPCASNLCEEFMCGVLAAGTAGISIISRNGSPPTRSAPRDVDIVVITEENECDGRERERRDSGFLHRVGIQGRVLPGCHGHELAVRIRVRACTIPREERGIRPWLLN 1138
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367981|emb|CCI43836.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 248.44 bits (633), Expect = 3.354e-65 Identity = 136/356 (38.20%), Postives = 200/356 (56.18%), Query Frame = 0
Query: 61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADS 416
SS+R +V + S S ++ PLN ++++ P AVGG +L+I+ + +G + K NLR S +NFS +D+ W + S LLA A+NG +++W++ + QERV+ H R VNRI WHP + LL+S SQD +IKLWD+RG+ YQPR+E+VRDV++ +P+ FAAA E+G +Q+WD R+ P K H GLVL+++WH I+A+G RDR VK+WDLSD + I T+++V R+ WRP Q+AT++S+ DN IH+WD RP +PLA+ GH D+ +WLDTP+ S A+S
Sbjct: 3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNLQKDGYKHVQERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQANS 318
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367986|emb|CCI43841.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 248.054 bits (632), Expect = 5.167e-65 Identity = 136/356 (38.20%), Postives = 200/356 (56.18%), Query Frame = 0
Query: 61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADS 416
SS+R +V + S S ++ PLN ++++ P AVGG +L+I+ + +G + K NLR S +NFS +D+ W + S LLA A+NG +++W++ + QERV+ H R VNRI WHP + LL+S SQD +IKLWD+RG+ YQPR+E+VRDV++ +P+ FAAA E+G +Q+WD R+ P K H GLVL+++WH I+A+G RDR VK+WDLSD + I T+++V R+ WRP Q+AT++S+ DN IH+WD RP +PLA+ GH D+ +WLDTP+ S A+S
Sbjct: 3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNLQKDGYKHVQERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQANS 318
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367984|emb|CCI43839.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 247.284 bits (630), Expect = 1.056e-64 Identity = 138/364 (37.91%), Postives = 202/364 (55.49%), Query Frame = 0
Query: 61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAG 424
SS+R +V + S S ++ PLN ++++ P AVGG +L+I+ + +G + K NLR S +NFS +D+ W + S LLA A+NG +++W++ + QERV+ H R VNRI WHP + LL+S SQD +IKLWD+RG+ YQPR+E+VRDV++ +P+ FAAA E+G +Q+WD R+ P K H GLVL+++WH I+A+G RDR VK+WDLSD + I T+++V R+ WRP Q+AT++S+ DN IH+WD RP +PLA+ GH D+ +WLDTP+ S A + ED G
Sbjct: 3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNLQKDGYKHVQERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQAST---EDSGG 323
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|673049377|ref|XP_008878649.1| (hypothetical protein H310_13067 [Aphanomyces invadans] >gi|574465577|gb|ETV92613.1| hypothetical protein H310_13067 [Aphanomyces invadans]) HSP 1 Score: 240.35 bits (612), Expect = 8.484e-63 Identity = 132/328 (40.24%), Postives = 187/328 (57.01%), Query Frame = 0
Query: 78 IELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTP 405
++ PLN +SV+ AVGG +LKI+++ P G K NLR S +NFS +D+ W S ++LA A+NG ++LWD+ ++ Q+R AH R VNRI WHP + LLLSASQD IKLWD+R + +Q ++E+VRDV++H + FAAA E+GSV++WD R + P K H G +L+L+WH T+ ++ATG+RDR+VK+WDLSD S S+ + LI + RI+WRP Y +AT+SS+ D+ I+VWDV RP++PLA GH D+ F W DTP
Sbjct: 13 MDFSGPLNAVSVSH----SQKLIAVGGRDVLKIVSLEPTGFVEKKNLR---SAKSNLNFSTNDIRW--HPQSDSVLATAATNGFLVLWDVQHK----LQKREYKAHDRAVNRICWHPTDPNLLLSASQDGLIKLWDQRNKGIPTTVFHQQKSESVRDVKFHVFEDTKFAAAFENGSVEIWDLRNHKQPETKFTAHQGHILSLDWHPTKGRVIATGSRDRSVKIWDLSDAS-------------------------KPFTSQTIALI---ANAGRIQWRPDYADHIATSSSIT-DSRINVWDVQRPFVPLACLHGHADIVSDFQWFDTP 298
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|953499829|emb|CEG38470.1| (hypothetical protein, variant [Plasmopara halstedii]) HSP 1 Score: 240.35 bits (612), Expect = 8.831e-62 Identity = 126/334 (37.72%), Postives = 187/334 (55.99%), Query Frame = 0
Query: 78 IELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWG 411
+E PLN +S++ AVGG +LK++ + G K NLR+ K + +NFS +D+ W S LLA A+NG +++W++ + QERV+ H R VNRI WH + +L+S SQD ++KLWD+RG TYQP++E+VRDV+ P P+ FAAA E+G VQ+WD R+ P K H GLVL+++WH T+ +LA+G RDR VK+W L D I T+++V R+ WRP + +AT++S+ DN+IHVWD+ RP++P+A+ +GH D+ W+DTP P +G
Sbjct: 13 MEFNGPLNALSLS----PNNRLVAVGGRDVLKVVALEASGFTEKRNLRVVGKPS--LNFSTNDIRW--HPHSDYLLATAATNGAVVIWNLEREGYKYVQERVLNGHRRAVNRICWHTSDWNILISGSQDGTVKLWDKRGG--KVMLTYQPKSESVRDVRASPFHPNKFAAAFENGIVQVWDMRKNAQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVKIWGLRDVRQPKQT------------------------------IQTIASVGRVAWRPTFVTHIATSASLV-DNSIHVWDIKRPFIPIASMKGHSDIASGISWMDTPMSPNFG 305
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367987|emb|CCI43842.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 238.424 bits (607), Expect = 9.097e-62 Identity = 137/372 (36.83%), Postives = 200/372 (53.76%), Query Frame = 0
Query: 61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPS----------------QERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADS 416
SS+R +V + S S ++ PLN ++++ P AVGG +L+I+ + +G + K NLR S +NFS +D+ W S LLA A+NG +++W++ +DG ERV+ H R VNRI WHP + LL+S SQD +IKLWD+RG+ YQPR+E+VRDV++ +P+ FAAA E+G +Q+WD R+ P K H GLVL+++WH I+A+G RDR VK+WDLSD + I T+++V R+ WRP Q+AT++S+ DN IH+WD RP +PLA+ GH D+ +WLDTP+ S A+S
Sbjct: 3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRW--HPQSNHLLATAATNGVVVIWNL-QKDGYKHVQGTFCDRNRHCIDSVSERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQANS 333
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|698792892|ref|XP_009829478.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574116135|gb|ETV81620.1| hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 232.261 bits (591), Expect = 1.018e-61 Identity = 130/346 (37.57%), Postives = 196/346 (56.65%), Query Frame = 0
Query: 78 IELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPSQERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQP-RAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDG 422
++ PLN +SV+ AVGG +LKI+ + G K NLR + S +NFS +D+ W S ++LA A+NG ++LWD+ ++ Q+R + AH R VNRI WHP + LLSASQD IKLWD+R + C A +Q ++E+VRDV+++ + FAAA E+GSV++WD R + P K H G +L+++WH ++ ++ATG+RDR+VK+WDLSD + S+ + LI + RI+WRP +AT+SS+ D+ I+VWD+ RP++PLA +GH D+ F W DTP + +G D++ DG
Sbjct: 13 MDFSGPLNAVSVSH----AQKLIAVGGRDVLKIVALETTGFVEKKNLRSS---KSNLNFSTNDIRW--HPQSDSMLATAATNGFLVLWDVQHK----VQKREVKAHDRAVNRICWHPTDPNSLLSASQDGLIKLWDQRHKGV-CTAVFQQQKSESVRDVKFNLFEDTRFAAAFENGSVEIWDVRNNKQPETKFTAHQGHILSIDWHPSKARVIATGSRDRSVKIWDLSDPA-------------------------KPATSQTIALI---ANAGRIQWRPDCEDHIATSSSI-TDSRINVWDIQRPFVPLACLQGHADIVSDFEWFDTPLVQSFGGATDTSLDYDG 315 HSP 2 Score: 65.0846 bits (157), Expect = 6.194e-7 Identity = 40/151 (26.49%), Postives = 70/151 (46.36%), Query Frame = 0
Query: 468 WGET-FSQSKGQRAGLQEEMDGWTCLGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTSHERVDRSGAFLGLHGGKRRAQGLFDEEEGGGHPAGAQAEGKQGMDKDAGGRGKSTLQQPPNVRADAGRTSPSHPRRPLY 617
W +T QS G + DG+ W+H+++C++D + LHSLA+A +PH T+ +++++ G +++SH+ +DRS L +H + E +P + + M Q PP A +PS PR P +
Sbjct: 294 WFDTPLVQSFGGATDTSLDYDGFR---YWQHVVACSKDKTLKLHSLAEAVKPHQTMHAVALAMNISGHVVSSHDEIDRSCTSLLIH-----------QHESSVNPIFSVSNNSLNM------------QHPPRKVKSAANLAPSMPRIPSF 418
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367982|emb|CCI43837.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 238.039 bits (606), Expect = 1.541e-61 Identity = 137/372 (36.83%), Postives = 201/372 (54.03%), Query Frame = 0
Query: 61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPS----------------QERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADS 416
SS+R +V + S S ++ PLN ++++ P AVGG +L+I+ + +G + K NLR S +NFS +D+ W + S LLA A+NG +++W++ +DG ERV+ H R VNRI WHP + LL+S SQD +IKLWD+RG+ YQPR+E+VRDV++ +P+ FAAA E+G +Q+WD R+ P K H GLVL+++WH I+A+G RDR VK+WDLSD + I T+++V R+ WRP Q+AT++S+ DN IH+WD RP +PLA+ GH D+ +WLDTP+ S A+S
Sbjct: 3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNLQ-KDGYKHVQGTFCDRNRHCIDSVSERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQANS 333
BLAST of EWM29379.1 vs. NCBI_GenBank
Match: gi|635367983|emb|CCI43838.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 237.654 bits (605), Expect = 1.695e-61 Identity = 139/380 (36.58%), Postives = 203/380 (53.42%), Query Frame = 0
Query: 61 SSKRHTVLPGSPSCVSHIELGKPLNCMSVARLPGAGAFFAAVGGAQMLKIINVSPLGLAVKSNLRLTHKVTSEVNFSIHDVEWCVKDTSRALLACGASNGNIILWDISNRDGRPS----------------QERVIAAHPRTVNRINWHPQEEGLLLSASQDTSIKLWDRRGRLYHCQATYQPRAEAVRDVQWHPSKPDYFAAACESGSVQLWDRRQGQGPVQKLMGHSGLVLALEWHLTEPWILATGARDRTVKVWDLSDQSTGNAVSEGGAGGGKEEGGGVGRGGMNGGRSKVLCLINTVSAVNRIKWRPGYPKQVATTSSVQGDNTIHVWDVDRPYLPLATFEGHEDVCGSFVWLDTPSLPEWGSHADSAHGEDGAG 424
SS+R +V + S S ++ PLN ++++ P AVGG +L+I+ + +G + K NLR S +NFS +D+ W + S LLA A+NG +++W++ +DG ERV+ H R VNRI WHP + LL+S SQD +IKLWD+RG+ YQPR+E+VRDV++ +P+ FAAA E+G +Q+WD R+ P K H GLVL+++WH I+A+G RDR VK+WDLSD + I T+++V R+ WRP Q+AT++S+ DN IH+WD RP +PLA+ GH D+ +WLDTP+ S A + ED G
Sbjct: 3 SSQRDSVRKSASSVRSSVDFNGPLNALAIS--PNNK--LVAVGGRDVLRIMALEAMGFSEKRNLRAG---KSSLNFSTNDIRWHPQ--SNHLLATAATNGVVVIWNL-QKDGYKHVQGTFCDRNRHCIDSVSERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK---AGNVYQPRSESVRDVRFSHFQPNRFAAAFENGIIQIWDIRKNAHPELKFTAHKGLVLSVDWHPNRSNIVASGGRDRYVKIWDLSDMDMKQQPHQT---------------------------IQTIASVGRVAWRPNCSDQIATSASLM-DNNIHLWDTQRPCIPLASMNGHSDIASGILWLDTPTSSMDSSQAST---EDSGG 338 The following BLAST results are available for this feature:
BLAST of EWM29379.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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