EWM29384.1, cds1309 (CDS) Nannochloropsis gaditana

Overview
NameEWM29384.1
Unique Namecds1309
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:302476..303122 -
Alignment locationCM002457.1:302174..302267 -
Alignment locationCM002457.1:301950..302123 -

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Properties
Property NameValue
Protein idEWM29384.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100028g30.3320.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:302476..303122 -
CM002457.1supercontigCM002457.1:302174..302267 -
CM002457.1supercontigCM002457.1:301950..302123 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29384.1 vs. NCBI_GenBank
Match: gi|585111912|gb|EWM29384.1| (hypothetical protein Naga_100028g30 [Nannochloropsis gaditana])

HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0 
Query:    1 MYAPQRLVSAQILFRHPSLLFLPVLMGLCTLVPDVTRAFTPLYISTPPASSPSVRHSFASPSARQCQTRRRSPWDPTHDLMRHAMQTVGHDAAVETALPLLFGSWTLEEKRVIQPLWGMKPVRHAGALGIPDGSSSTFEVLLKPKGRLDQPVDSAVRGLDWTLNFKDMYATGRLEFKIVHPPPDKKLIANDQIPHIHYYSGTFCDGLNRVEGFVERTLRERQVRRAAMYILQFRLGKRPANVFEWGMCTSSIYTAWVDRSPKRRTGSVIRRIVPRVAPDVPCFKRLQTRRTRACGCQTQKSVPM 304
            MYAPQRLVSAQILFRHPSLLFLPVLMGLCTLVPDVTRAFTPLYISTPPASSPSVRHSFASPSARQCQTRRRSPWDPTHDLMRHAMQTVGHDAAVETALPLLFGSWTLEEKRVIQPLWGMKPVRHAGALGIPDGSSSTFEVLLKPKGRLDQPVDSAVRGLDWTLNFKDMYATGRLEFKIVHPPPDKKLIANDQIPHIHYYSGTFCDGLNRVEGFVERTLRERQVRRAAMYILQFRLGKRPANVFEWGMCTSSIYTAWVDRSPKRRTGSVIRRIVPRVAPDVPCFKRLQTRRTRACGCQTQKSVPM
Sbjct:    1 MYAPQRLVSAQILFRHPSLLFLPVLMGLCTLVPDVTRAFTPLYISTPPASSPSVRHSFASPSARQCQTRRRSPWDPTHDLMRHAMQTVGHDAAVETALPLLFGSWTLEEKRVIQPLWGMKPVRHAGALGIPDGSSSTFEVLLKPKGRLDQPVDSAVRGLDWTLNFKDMYATGRLEFKIVHPPPDKKLIANDQIPHIHYYSGTFCDGLNRVEGFVERTLRERQVRRAAMYILQFRLGKRPANVFEWGMCTSSIYTAWVDRSPKRRTGSVIRRIVPRVAPDVPCFKRLQTRRTRACGCQTQKSVPM 304
[Close]
BLAST of EWM29384.1 vs. NCBI_GenBank
Match: gi|553185334|ref|XP_005854237.1| (hypothetical protein NGA_0194600 [Nannochloropsis gaditana CCMP526] >gi|422294828|gb|EKU22128.1| hypothetical protein NGA_0194600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 290.426 bits (742), Expect = 3.394e-96
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:   81 MRHAMQTVGHDAAVETALPLLFGSWTLEEKRVIQPLWGMKPVRHAGALGIPDGSSSTFEVLLKPKGRLDQPVDSAVRGLDWTLNFKDMYATGRLEFKIVHPPPDKKLIANDQIPHIHYYSGTFCDGLNRVEGFVER 216
            MRHAMQTVGHDAAVETALPLLFGSWTLEEKRVIQPLWGMKPVRHAGALGIPDGSSSTFEVLLKPKGRLDQPVDSAVRGLDWTLNFKDMYATGRLEFKIVHPPPDKKLIANDQIPHIHYYSGTFCDGLNRVEGFVER
Sbjct:    1 MRHAMQTVGHDAAVETALPLLFGSWTLEEKRVIQPLWGMKPVRHAGALGIPDGSSSTFEVLLKPKGRLDQPVDSAVRGLDWTLNFKDMYATGRLEFKIVHPPPDKKLIANDQIPHIHYYSGTFCDGLNRVEGFVER 136
The following BLAST results are available for this feature:
BLAST of EWM29384.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585111912|gb|EWM29384.1|0.000e+0100.00hypothetical protein Naga_100028g30 [Nannochlorops... [more]
gi|553185334|ref|XP_005854237.1|3.394e-96100.00hypothetical protein NGA_0194600 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1311rna1311Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications