EWM29374.1, cds1299 (CDS) Nannochloropsis gaditana

Overview
NameEWM29374.1
Unique Namecds1299
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:280755..281906 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29374.1
Productprotein kinase
Orig transcript idgnl|cribi|Naga_100028g17.3310.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:280755..281906 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Homology
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|553191906|ref|XP_005855481.1| (protein kinase [Nannochloropsis gaditana CCMP526] >gi|422293583|gb|EKU20883.1| protein kinase [Nannochloropsis gaditana CCMP526] >gi|585111902|gb|EWM29374.1| protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 788.104 bits (2034), Expect = 0.000e+0
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0
Query:    1 MAECVQHIDADISPHAASDALLRELEEAGGDGLGGPGTPTLFTSSSPSHIAAPGLIQSKCCSAAAENPAADVVLGPYAVQETCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLTLEQERHDPSQKPTDGTNKTGEHTSGQPQLQPPQSRRATTLSPISVPASMEGDLNTPGSDTGREDKFKSGAAPLVVTPSGVDEIGELELADAMHVVTDEEESEDEN 383
            MAECVQHIDADISPHAASDALLRELEEAGGDGLGGPGTPTLFTSSSPSHIAAPGLIQSKCCSAAAENPAADVVLGPYAVQETCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLTLEQERHDPSQKPTDGTNKTGEHTSGQPQLQPPQSRRATTLSPISVPASMEGDLNTPGSDTGREDKFKSGAAPLVVTPSGVDEIGELELADAMHVVTDEEESEDEN
Sbjct:    1 MAECVQHIDADISPHAASDALLRELEEAGGDGLGGPGTPTLFTSSSPSHIAAPGLIQSKCCSAAAENPAADVVLGPYAVQETCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLTLEQERHDPSQKPTDGTNKTGEHTSGQPQLQPPQSRRATTLSPISVPASMEGDLNTPGSDTGREDKFKSGAAPLVVTPSGVDEIGELELADAMHVVTDEEESEDEN 383          
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|219117435|ref|XP_002179512.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409403|gb|EEC49335.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 167.548 bits (423), Expect = 1.670e-45
Identity = 89/240 (37.08%), Postives = 133/240 (55.42%), Query Frame = 0
Query:   84 VILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHP------------------------------------------LKNLLSFGDSMEERTAVQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLTLEQ 281
            +I DWDDT+ PSSFVDR K+     +++LP   QR F E+ +    ++  A+KYG V++ITN+  GWV+    +++P L+ VL    R+VSAR+ YER++PG PLCWK+AAFAHE+ +L  S                                               + ++SFGDSMEERTAV+I A  L GA  KSV F+  P+P ++  Q+++V   ++++  H  +LD+ +T EQ
Sbjct:   12 IIFDWDDTICPSSFVDRYKI---ERMEKLPRNFQRLFEEITRLTERVLREASKYGEVILITNSDEGWVKYSCERYLPRLLPVLE-GYRIVSARTLYERFYPGQPLCWKAAAFAHEVNELYESMSASDDSAMNGSMESTDVSSTDSEEEKPSMDEEEKKCINTNLSFLGEREIISFGDSMEERTAVRIVAEQL-GATPKSVMFIQLPTPVQILGQLQMVAAHMKFVCEHKSSLDLEITTEQ 246          
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|298711725|emb|CBJ32771.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 158.303 bits (399), Expect = 2.329e-39
Identity = 86/202 (42.57%), Postives = 122/202 (60.40%), Query Frame = 0
Query:   81 ETCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFA-----HELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVL 277
            E  ++ DWDDT+  SS++    L+     DELP E++R  A+LE++    +  A + GTV+IITNA++GWVEL  ++F   ++ +L   V V+SARS +E  FPG PLCWKSAAFA     H L + Q  Q    K ++S GDS EE+ A++IA+G      AKSVKF+  P P  L  Q++ VT  L  +   N  +D+VL
Sbjct:   71 EPLIVFDWDDTMLTSSWIQVNDLLQAGSYDELPLEVRRDLAQLERSVVKCLKNARRLGTVIIITNAESGWVELSAARFFVNVLPLL-EGVPVISARSLFESQFPGSPLCWKSAAFAYMMHDHFLERPQWMQ----KKVVSIGDSNEEKVAMRIASGQHGTMAAKSVKFITGPDPEALACQLDFVTKHLASVLSSNSDVDIVL 267          
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|545711873|ref|XP_005708242.1| (hypothetical protein Gasu_11000 [Galdieria sulphuraria] >gi|452824721|gb|EME31722.1| hypothetical protein Gasu_11000 [Galdieria sulphuraria])

HSP 1 Score: 141.354 bits (355), Expect = 6.834e-35
Identity = 77/194 (39.69%), Postives = 110/194 (56.70%), Query Frame = 0
Query:   82 TCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDV 275
            T +ILDWDDTL  SS++  + L       E+P  + +   ELE     L+   +K+G V I+TNA+TGWVEL   KF+P + + +   +RVVSARSN+E+ FP  P  WK  AF  EL +L         NLL  GDS+ ER A  +A     G+  KSVKF++ P+  +L +Q+ ++   L  +  H G+ DV
Sbjct:  178 TVIILDWDDTLLSSSWLAGEGL-KVDETQEVPDAVYQELNELEGLVLSLLIECSKHGIVSIVTNAETGWVELSSKKFIPRVFSYIEEGIRVVSARSNFEKEFPDSPAQWKEKAFLLELGRLPVDMTRL--NLLVLGDSLNERDAGHVAGTVYTGSHVKSVKFIERPTIEQLKRQLSLIISSLHHLCDHEGSFDV 368          
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|1173932748|gb|OQR84660.1| (hypothetical protein ACHHYP_13080, partial [Achlya hypogyna])

HSP 1 Score: 134.035 bits (336), Expect = 3.450e-33
Identity = 86/254 (33.86%), Postives = 132/254 (51.97%), Query Frame = 0
Query:   36 PGTPTLFTSSSPSH----IAAPGLIQSKCCSAAAENPAADVVLGPYAVQETCVILDWDDTLFPSSFVD----RKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHPLKNLLSFGDSMEERTA-VQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLTLE 280
            P TP    SSSPS     +A  G++  +   ++  + A D          T + LDWDDTL  S++V     R K ++ + +  +P +++    ELE+    L+  A KYG V+IIT A+TGWVEL  S FMP  + ++   ++VVSARS YE  +PG P  WK  AF HE+    N Q    K+++S GD   ER A + +         AKS+K +  P+  EL  ++ ++ D L  +  H   +D+ ++ E
Sbjct:   17 PVTPDARRSSSPSDTRSTMAPNGVMYEEPTDSSPTSTAND----------TVIFLDWDDTLLASTWVGKLGLRPKYVNEKPV--IPEDVKLQLEELEECVIALLENAIKYGRVVIITAAETGWVELSASLFMPRTLPIIQSMIKVVSARSTYEELYPGAPKKWKIEAFQHEV--YNNCQSTTPKHIISIGDGPTEREALINLKMSSYASFHAKSLKLITYPNAVELKMEVRLLLDNLHTLCTHEEDMDLQISKE 256          
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|953489694|emb|CEG47060.1| (hypothetical protein PHALS_03721 [Plasmopara halstedii])

HSP 1 Score: 133.65 bits (335), Expect = 8.226e-33
Identity = 77/209 (36.84%), Postives = 115/209 (55.02%), Query Frame = 0
Query:   81 ETCVILDWDDTLFPSSFVDRKKLI--HCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQL------QNSQGHPLKNLLSFGDSMEERTA-VQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLTLE 280
            +  +  DWDDTL  SS + +  L   +     E+P ++Q    ELEK+A  L+  A  YG V+I+T A+TGWVEL  S FMP L+  L   ++V+SARS YE  +P  P  WK  AF HE+  +      +NS G P ++++S GD   ER A + +    +     KS+KF+  P   EL  ++E++   +E +  H G LD+ +T E
Sbjct:   70 DVVIFFDWDDTLMASSAIAKLGLCPKYINEEPEIPDDVQAELKELEKSAVQLLETALSYGRVVIVTAAETGWVELSASLFMPRLVPFLNTRIKVISARSTYEYLYPDCPRRWKMEAFNHEVFPVWESYGEENSAGIP-RHVISLGDGPTEREALINVKMQAMDACHGKSMKFIAYPKICELQLEVELILANMEHLCTHEGDLDLQITWE 277          
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|1173953019|gb|OQS00588.1| (hypothetical protein THRCLA_05910 [Thraustotheca clavata])

HSP 1 Score: 130.954 bits (328), Expect = 2.690e-32
Identity = 74/202 (36.63%), Postives = 117/202 (57.92%), Query Frame = 0
Query:   78 AVQETCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYG-TVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLT 278
            ++  T ++LDWDDTLFP+S + RK      G   L  E Q+    L K  A  + +  +   T +IITN + GWV+    +FMP L+  L  ++++VSAR+ YE  +P D   WK+A F  EL ++   Q +P ++++S GDS  ER A++  +  +  A+ KSVKFL  PS  +L +Q++++   L  +  H G LD+VL+
Sbjct:   24 SIASTVIVLDWDDTLFPNSHLSRKNYPLEEGPFVLAFEDQQMLDTLVKYIATFLASCIEANRTCIIITNGEDGWVQTSCERFMPSLLPFLQ-NIQIVSARTAYEEKYPIDE--WKTACFTVELAKIMGHQSNPHQHVISIGDSHYERQALKAFSNKMPLAKTKSVKFLHVPSMVDLCRQVKLIQTYLSHLCTHPGHLDLVLS 222          
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|401408643|ref|XP_003883770.1| (conserved hypothetical protein [Neospora caninum Liverpool] >gi|325118187|emb|CBZ53738.1| conserved hypothetical protein [Neospora caninum Liverpool] >gi|820691985|tpe|CEL67728.1| TPA: hypothetical protein BN1204_035200 [Neospora caninum Liverpool])

HSP 1 Score: 137.887 bits (346), Expect = 3.217e-32
Identity = 84/209 (40.19%), Postives = 117/209 (55.98%), Query Frame = 0
Query:   77 YAVQETCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAA----GLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQG---ARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLT 278
            ++ QET  I DWDDTL PSS++ +K L     L+   SE+     +L + A      L TA T  G V+I+TNA++GW++L  SKF+PGL  +L     +VSARS YE  +   P  WK AAF HEL Q          N++S GDS  ER A+      L+       KS+K L++P+  ELH Q E+++ CL  + RH G LD+ +T
Sbjct:  377 FSRQETVFIFDWDDTLLPSSWISQKGLT----LESAESEVSLWRMKLAQTAMWAEQTLFTART-LGQVIIVTNAESGWIDLSCSKFLPGLREMLNC-FPIVSARSMYESAWCNTPFLWKEAAFMHEL-QRHFRMESKRWNVISVGDSTHEREALLAVCSRLRKMYHVTTKSLKLLESPAVEELHSQHELMSKCLAAVARHKGNLDLCVT 578          
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|673022544|ref|XP_008865233.1| (hypothetical protein H310_03219 [Aphanomyces invadans] >gi|574478461|gb|ETW05456.1| hypothetical protein H310_03219 [Aphanomyces invadans])

HSP 1 Score: 129.028 bits (323), Expect = 1.610e-31
Identity = 78/226 (34.51%), Postives = 122/226 (53.98%), Query Frame = 0
Query:   70 ADVVLGPYA------VQETCVILDWDDTLFPSSFVD----RKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQN--SQGHPLKNLLSFGDSMEERTA---VQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLTLE 280
            AD V  P A        +T + LDWDDTL  S++V     R K ++ + +  +P +++    ELE     L+ +A KYG V+IIT A+TGWVEL  S FMP  + ++   ++VVSARS YE  +PG P  WK  AF HE+    +      P K+++S GD   ER A   +++++       AKS+K +  P+  EL  ++ ++ D L  +  H   +D+ ++ E
Sbjct:    8 ADNVFAPDAPVLDDLTNDTVIFLDWDDTLLASTWVGKLGLRPKYVNEKPI--IPDDVKSQLEELEDCVVELLESAVKYGRVVIITAAETGWVELSASLFMPRCLPIISEHIKVVSARSTYEDLYPGSPKKWKIEAFQHEVYYCDSVADNSSPPKHIISIGDGPTEREALINLKMSSSGRSPFHAKSLKLITYPNAIELKMEVRLLLDNLHTLCTHEEDMDLQISKE 231          
BLAST of EWM29374.1 vs. NCBI_GenBank
Match: gi|672573015|gb|KFH11825.1| (hypothetical protein TGVAND_271960 [Toxoplasma gondii VAND])

HSP 1 Score: 135.961 bits (341), Expect = 1.714e-31
Identity = 80/208 (38.46%), Postives = 114/208 (54.81%), Query Frame = 0
Query:   77 YAVQETCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSEL---QRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQG---ARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLT 278
            ++ QET  I DWDDTL PSS++ +K L     L+   SE+   +   A+    A   +  A   G V+I+TNA++GW++L  SKF+P L  +L     +VSARS YE  +   P  WK AAF HEL Q          N++S GDS  ER A+      L+       KS+K L++P+  ELH Q E+++ CL  + RH G LD+ +T
Sbjct:  408 FSRQETVFIFDWDDTLLPSSWISQKGLT----LESAESEVCLWRMKLAQTAMWAEQTLFTARSLGQVIIVTNAESGWIDLSCSKFLPELREMLNC-FPIVSARSMYESAWCNTPFMWKEAAFMHEL-QRHFRMESKRWNVISVGDSTHEREALLTVCSRLRKMYHVTTKSLKLLESPAVEELHSQHELMSKCLAAVARHKGNLDLCIT 609          
The following BLAST results are available for this feature:
BLAST of EWM29374.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553191906|ref|XP_005855481.1|0.000e+0100.00protein kinase [Nannochloropsis gaditana CCMP526] ... [more]
gi|219117435|ref|XP_002179512.1|1.670e-4537.08predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|298711725|emb|CBJ32771.1|2.329e-3942.57conserved unknown protein [Ectocarpus siliculosus][more]
gi|545711873|ref|XP_005708242.1|6.834e-3539.69hypothetical protein Gasu_11000 [Galdieria sulphur... [more]
gi|1173932748|gb|OQR84660.1|3.450e-3333.86hypothetical protein ACHHYP_13080, partial [Achlya... [more]
gi|953489694|emb|CEG47060.1|8.226e-3336.84hypothetical protein PHALS_03721 [Plasmopara halst... [more]
gi|1173953019|gb|OQS00588.1|2.690e-3236.63hypothetical protein THRCLA_05910 [Thraustotheca c... [more]
gi|401408643|ref|XP_003883770.1|3.217e-3240.19conserved hypothetical protein [Neospora caninum L... [more]
gi|673022544|ref|XP_008865233.1|1.610e-3134.51hypothetical protein H310_03219 [Aphanomyces invad... [more]
gi|672573015|gb|KFH11825.1|1.714e-3138.46hypothetical protein TGVAND_271960 [Toxoplasma gon... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1301rna1301Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications