EWM29351.1, cds1288 (CDS) Nannochloropsis gaditana

Overview
NameEWM29351.1
Unique Namecds1288
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:248417..252124 -

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Properties
Property NameValue
Protein idEWM29351.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100028g3.3287.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:248417..252124 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29351.1 vs. NCBI_GenBank
Match: gi|585111879|gb|EWM29351.1| (hypothetical protein Naga_100028g3 [Nannochloropsis gaditana])

HSP 1 Score: 2474.12 bits (6411), Expect = 0.000e+0
Identity = 1235/1235 (100.00%), Postives = 1235/1235 (100.00%), Query Frame = 0 
Query:    1 MSHVTSPSRTSSELQHLLRQQLEELRWVVSATTVDTLSTSAAHSALAPSTEKFRLAHDYHVLVAETPPLEEPSLTSPSSSTLRLSYSSRLSPPFSRSFSSSSSDEHDTTYAHRTTWTPRVSSTYLAPIATPLQTHLSKLKCLLLESDFHLQQQVFIVWKQKCWYVISLRRRLRGAFCRMKAAGNRAASLHTADAYNKYCRQRHLISILKQRVVKSASCEASVARGIRAHLHRIARRAFAQMGRRVSCRRQGDIVVVQQQGRLVQTAFHAWRCLLTCGYHVRRRERRFLTKCLKEWQHVNLIEERCLQALTIKVRAQKAFSALTSEHRRLQNQASSAMHLMTVHRVRASFNHWVHGCHLQRRHRSRIARGETHFRRTQWRRGQAALCAYFWRREEADRSQRRAEIFAAKQLSAKTLGTWRTFAQIQATEVEARVQEGATRNLQRRRARAFRQLRERARCQRQIKALMTVFTMKKGQRRLCYWHAWVQECGARRLRELQHEKDRVSAFLDGYFHRWTAYCRLQMARRRVLLLHTKSQLASVLKVLHHTFTIHTLARSIQHGREQELQDRCLQWWRGVAKHSTCLRRLRSARALRRWRLGMARLTLQRSLEKDTGNRAWQRTACQRMFGKWLLWVAARRTFHSQLGLVLVHRRRKSECRCRAMLHDWSTHARARRHRLCLESEADAGRQRNQKTAFLYALQRNQRRRRIEILSMGRANEISHRRKRTQGLKGLLWLHRIRVSLPLLRQRAMNAWWLRRAWKVWTRNFLRSIQLRQRQRKNEILSAGQWEVRRLFSSLYRLQCFIKICRSFHTLRQRTVSRRLEQACQRWRRNALLVSKLRNFQRRCQERLVGRLFSVWRGWSSEQPLKREAVVQCMENTRKTRHFHAWRAVILHRKELTLRAKAVSDVVGLGILRRAWEEGWRKSFNEARLEKCAELFVLRSRGLKPWRRWSQNMQERQEKAKLTEALEEMRLLRYTLRTWQAARRFLLRDHNAVNAMSLWRLNAGWRRWRARAARLKNKTLAENRQMARHIAYWCTFLRRRIRHNAWLAQLQTWSVARPTFIEALVGNFPSGVLHLAWKKWLVWYGLRVQSRKMQGAGDMHVAKGKPLAFVRRLQLRVRTKQHVRDHTQVRNYLVSQFVKVRAFQRLQERIITARKERLAIRRRELGIQLARDRRHCLEQILWRWKAYTDTMRTTREWLHSGKGCDRVIRDSDRGVTEWIKPIKTGQNNALGESCAL 1235
            MSHVTSPSRTSSELQHLLRQQLEELRWVVSATTVDTLSTSAAHSALAPSTEKFRLAHDYHVLVAETPPLEEPSLTSPSSSTLRLSYSSRLSPPFSRSFSSSSSDEHDTTYAHRTTWTPRVSSTYLAPIATPLQTHLSKLKCLLLESDFHLQQQVFIVWKQKCWYVISLRRRLRGAFCRMKAAGNRAASLHTADAYNKYCRQRHLISILKQRVVKSASCEASVARGIRAHLHRIARRAFAQMGRRVSCRRQGDIVVVQQQGRLVQTAFHAWRCLLTCGYHVRRRERRFLTKCLKEWQHVNLIEERCLQALTIKVRAQKAFSALTSEHRRLQNQASSAMHLMTVHRVRASFNHWVHGCHLQRRHRSRIARGETHFRRTQWRRGQAALCAYFWRREEADRSQRRAEIFAAKQLSAKTLGTWRTFAQIQATEVEARVQEGATRNLQRRRARAFRQLRERARCQRQIKALMTVFTMKKGQRRLCYWHAWVQECGARRLRELQHEKDRVSAFLDGYFHRWTAYCRLQMARRRVLLLHTKSQLASVLKVLHHTFTIHTLARSIQHGREQELQDRCLQWWRGVAKHSTCLRRLRSARALRRWRLGMARLTLQRSLEKDTGNRAWQRTACQRMFGKWLLWVAARRTFHSQLGLVLVHRRRKSECRCRAMLHDWSTHARARRHRLCLESEADAGRQRNQKTAFLYALQRNQRRRRIEILSMGRANEISHRRKRTQGLKGLLWLHRIRVSLPLLRQRAMNAWWLRRAWKVWTRNFLRSIQLRQRQRKNEILSAGQWEVRRLFSSLYRLQCFIKICRSFHTLRQRTVSRRLEQACQRWRRNALLVSKLRNFQRRCQERLVGRLFSVWRGWSSEQPLKREAVVQCMENTRKTRHFHAWRAVILHRKELTLRAKAVSDVVGLGILRRAWEEGWRKSFNEARLEKCAELFVLRSRGLKPWRRWSQNMQERQEKAKLTEALEEMRLLRYTLRTWQAARRFLLRDHNAVNAMSLWRLNAGWRRWRARAARLKNKTLAENRQMARHIAYWCTFLRRRIRHNAWLAQLQTWSVARPTFIEALVGNFPSGVLHLAWKKWLVWYGLRVQSRKMQGAGDMHVAKGKPLAFVRRLQLRVRTKQHVRDHTQVRNYLVSQFVKVRAFQRLQERIITARKERLAIRRRELGIQLARDRRHCLEQILWRWKAYTDTMRTTREWLHSGKGCDRVIRDSDRGVTEWIKPIKTGQNNALGESCAL
Sbjct:    1 MSHVTSPSRTSSELQHLLRQQLEELRWVVSATTVDTLSTSAAHSALAPSTEKFRLAHDYHVLVAETPPLEEPSLTSPSSSTLRLSYSSRLSPPFSRSFSSSSSDEHDTTYAHRTTWTPRVSSTYLAPIATPLQTHLSKLKCLLLESDFHLQQQVFIVWKQKCWYVISLRRRLRGAFCRMKAAGNRAASLHTADAYNKYCRQRHLISILKQRVVKSASCEASVARGIRAHLHRIARRAFAQMGRRVSCRRQGDIVVVQQQGRLVQTAFHAWRCLLTCGYHVRRRERRFLTKCLKEWQHVNLIEERCLQALTIKVRAQKAFSALTSEHRRLQNQASSAMHLMTVHRVRASFNHWVHGCHLQRRHRSRIARGETHFRRTQWRRGQAALCAYFWRREEADRSQRRAEIFAAKQLSAKTLGTWRTFAQIQATEVEARVQEGATRNLQRRRARAFRQLRERARCQRQIKALMTVFTMKKGQRRLCYWHAWVQECGARRLRELQHEKDRVSAFLDGYFHRWTAYCRLQMARRRVLLLHTKSQLASVLKVLHHTFTIHTLARSIQHGREQELQDRCLQWWRGVAKHSTCLRRLRSARALRRWRLGMARLTLQRSLEKDTGNRAWQRTACQRMFGKWLLWVAARRTFHSQLGLVLVHRRRKSECRCRAMLHDWSTHARARRHRLCLESEADAGRQRNQKTAFLYALQRNQRRRRIEILSMGRANEISHRRKRTQGLKGLLWLHRIRVSLPLLRQRAMNAWWLRRAWKVWTRNFLRSIQLRQRQRKNEILSAGQWEVRRLFSSLYRLQCFIKICRSFHTLRQRTVSRRLEQACQRWRRNALLVSKLRNFQRRCQERLVGRLFSVWRGWSSEQPLKREAVVQCMENTRKTRHFHAWRAVILHRKELTLRAKAVSDVVGLGILRRAWEEGWRKSFNEARLEKCAELFVLRSRGLKPWRRWSQNMQERQEKAKLTEALEEMRLLRYTLRTWQAARRFLLRDHNAVNAMSLWRLNAGWRRWRARAARLKNKTLAENRQMARHIAYWCTFLRRRIRHNAWLAQLQTWSVARPTFIEALVGNFPSGVLHLAWKKWLVWYGLRVQSRKMQGAGDMHVAKGKPLAFVRRLQLRVRTKQHVRDHTQVRNYLVSQFVKVRAFQRLQERIITARKERLAIRRRELGIQLARDRRHCLEQILWRWKAYTDTMRTTREWLHSGKGCDRVIRDSDRGVTEWIKPIKTGQNNALGESCAL 1235
The following BLAST results are available for this feature:
BLAST of EWM29351.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111879|gb|EWM29351.1|0.000e+0100.00hypothetical protein Naga_100028g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1290rna1290Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications