EWM29396.1, cds1274 (CDS) Nannochloropsis gaditana

Overview
NameEWM29396.1
Unique Namecds1274
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:220478..220508 -
Alignment locationCM002457.1:220108..220392 -
Alignment locationCM002457.1:218778..219932 -
Alignment locationCM002457.1:217899..218551 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29396.1
Productcation efflux protein
Orig transcript idgnl|cribi|Naga_100042g15.5643.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:220478..220508 -
CM002457.1supercontigCM002457.1:220108..220392 -
CM002457.1supercontigCM002457.1:218778..219932 -
CM002457.1supercontigCM002457.1:217899..218551 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0008324cation transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
GO:0006812cation transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR027469Cation_efflux_TMD
IPR002524Cation_efflux
IPR027470Cation_efflux_CTD
Homology
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|585111925|gb|EWM29396.1| (cation efflux protein [Nannochloropsis gaditana])

HSP 1 Score: 1421.76 bits (3679), Expect = 0.000e+0
Identity = 707/707 (100.00%), Postives = 707/707 (100.00%), Query Frame = 0
Query:    1 MKNAATRQCTHCPRSDGLHGVVAVILTPGYTHEESPSQLVREPLLTQMVVSQDVTRRRRRPHWGGFVFVLGMTASVATAWQPLSMTKSQGLHAMPFGPLSASSFTGVRHQSAFPSASIAILPMTKQYSRSCALKMHIGPHSHGHEPPHQHPDGHPPLAHMTGVRGFVLYIISVLKQKKQTIAGVLLGAVAVVAVRSYQGVRRFSGADVGMLGLIATFVLAVESTKSYLNTLRENIAQIAAAWRAHRSLRLLHSERPLATGGPAVSQLAAGAAESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTLALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTDTVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVTEPLPCPLAMELRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYVSMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDLTSTGSPATAVLHSPSPTGD 707
            MKNAATRQCTHCPRSDGLHGVVAVILTPGYTHEESPSQLVREPLLTQMVVSQDVTRRRRRPHWGGFVFVLGMTASVATAWQPLSMTKSQGLHAMPFGPLSASSFTGVRHQSAFPSASIAILPMTKQYSRSCALKMHIGPHSHGHEPPHQHPDGHPPLAHMTGVRGFVLYIISVLKQKKQTIAGVLLGAVAVVAVRSYQGVRRFSGADVGMLGLIATFVLAVESTKSYLNTLRENIAQIAAAWRAHRSLRLLHSERPLATGGPAVSQLAAGAAESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTLALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTDTVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVTEPLPCPLAMELRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYVSMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDLTSTGSPATAVLHSPSPTGD
Sbjct:    1 MKNAATRQCTHCPRSDGLHGVVAVILTPGYTHEESPSQLVREPLLTQMVVSQDVTRRRRRPHWGGFVFVLGMTASVATAWQPLSMTKSQGLHAMPFGPLSASSFTGVRHQSAFPSASIAILPMTKQYSRSCALKMHIGPHSHGHEPPHQHPDGHPPLAHMTGVRGFVLYIISVLKQKKQTIAGVLLGAVAVVAVRSYQGVRRFSGADVGMLGLIATFVLAVESTKSYLNTLRENIAQIAAAWRAHRSLRLLHSERPLATGGPAVSQLAAGAAESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTLALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTDTVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVTEPLPCPLAMELRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYVSMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDLTSTGSPATAVLHSPSPTGD 707          
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|298714904|emb|CBJ27660.1| (cation efflux protein [Ectocarpus siliculosus])

HSP 1 Score: 375.941 bits (964), Expect = 4.119e-118
Identity = 208/514 (40.47%), Postives = 307/514 (59.73%), Query Frame = 0
Query:  176 QKKQTIAGVLLGAVAVVAVRSYQGVRRFSGADVGMLGLIATFVLAVESTKSYLNTLRENIAQIAAAWRAHRSLRLLHSERPLATGGPAVSQLAAGAAESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTLALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTDTVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVTEPLPCPLAMELRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYVSMAPTVDVLLQIDPDLSVREAGEVARRVQKLL-EGIKDVTKAEVHLDL 688
            +K+ T+  + L ++ V+AV  +   RR S  +   LG ++ F+ AV+ +K  ++ LR  + Q+ + W+AH  L          +   A  + A  A E D +TW G   N+GL A K  AG+LG S+AM+ADAGH+LSDL+SD VTLWAVR+S LPPD+DHPYGHGRFEAVG+  ++ +L+   + I  H+++ L+                              +++RG H          A P+ L  VAA+ SI+ KE L++ T ++G + NSQV++ANAWHHR+DA+SS++AL  I  + +G   LDPIAG++V  M+ LTG+Q+  D+M QLTD  + D    +  +A  V GV     VRARRMGPQ LVDL I  D  ISASAAQQ+  +VRW +  + P V++V+V+   EP PCP    LR   DIE D+R  +      + P + +V K+MVHY++M  T +V +++DP+L +R+A ++ARR ++ L   + D+  +EVHLDL
Sbjct:  131 KKRPTLIRLFLASMCVLAVPLW---RRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQLYSGWKAHSDL--------ATSSQQANIESAEAAREVDAITWAGALVNVGLAAFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIALMLMGAGYGIGNHSFETLR-----------------------------EVISRGEH---------AAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMSGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRKVAEIATQVPGVLSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVEPKPCPAMSSLRPQEDIEQDIRDVV----LSKLPEIESVPKIMVHYINMVTTAEVFIRVDPNLKIRDAADIARRTKRALSSSVHDLCSSEVHLDL 591          
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|567965209|gb|ETK90682.1| (hypothetical protein L915_05596 [Phytophthora parasitica])

HSP 1 Score: 281.182 bits (718), Expect = 3.344e-83
Identity = 175/436 (40.14%), Postives = 253/436 (58.03%), Query Frame = 0
Query:  273 ESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTL------ALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTD-TVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVT--EPLPCPLAME-------LRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYV----SMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDL 688
            E+ ++T +G+Y N+ + A K   G+   S+A++ADA H+LSDL+SD+VTLW+V+++ LPPD  HPYG+G++EAVGSL V A+L+L    I A  +  LQ  L      +LP    LPF    LS +  S  W                        ALA  AA  SI  KE LY  T  +G + NS+V++ANAWHHR+DAISS++ALGGIV + AG+  LDP+AG+ V AMI  TG +I LDS+ +LTD TVE++ +  +  V+ SV+ V   S VRARRMGP  LVDLR+ + ++ S S AQQ++++VR  + ++ P+VSEVLVH     +   C    E        R   +I+ D+  AL        P +     +  H++         VDV + + PDL V  A  VA++V+K +E I  + +A++HL+L
Sbjct:   82 EAMKITRVGMYVNVAMAATKGAVGLAIHSSALIADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYEAVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFN-LPF----LSEIDRSTQW------------------------ALAAGAAGVSIGAKEALYHATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGMAVAAMIVKTGGEICLDSVQELTDNTVEAEVLETLEEVSGSVDDVLHVSQVRARRMGPYTLVDLRVHLHARTSISMAQQISERVRSHILQEVPDVSEVLVHIDVQFDQFSCSAFSEGEVNKKNFRPYREIKNDISYALATI-----PEITGTTHINTHWLPHLGGRHTAVDVAIVVQPDLKVGAAHGVAKKVRKAIEAIPYIVEADIHLEL 483          
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|570955396|gb|ETP20561.1| (hypothetical protein F441_05741 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 281.182 bits (718), Expect = 4.537e-83
Identity = 174/436 (39.91%), Postives = 252/436 (57.80%), Query Frame = 0
Query:  273 ESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTL------ALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTD-TVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVT--EPLPCPLAME-------LRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYV----SMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDL 688
            E+ ++T +G+Y N+ + A K   G+   S+A++ADA H+LSDL+SD+VTLW+V+++ LPPD  HPYG+G++EAVGSL V A+L+L    I A  +  LQ  L      +LP    LPF    LS +  S  W                        ALA  AA  SI  KE LY  T  +G + NS+V++ANAWHHR+DAISS++ALGGIV + AG+  LDP+AG+ V AMI  TG +I LDS+ +LTD TVE++ +  +  V+ SV+ V   S VRARRMGP  LVDLR+ + ++ S S AQQ++++VR  + ++ P+VSEVLVH     +   C    E        R   +I+ D+  AL        P +     +  H++         VDV + + PDL V  A  VA++ +K +E I  + +A++HL+L
Sbjct:   82 EAMKITRVGMYVNVAMAATKGAVGLAIHSSALIADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYEAVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFN-LPF----LSEIDRSTQW------------------------ALAAGAAGVSIAAKEALYHATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGVAVAAMIVKTGGEICLDSVQELTDNTVEAEVLETLEEVSGSVDDVLHVSQVRARRMGPYTLVDLRVHLHARTSISMAQQISERVRSHILQEVPDVSEVLVHIDVQFDQFSCSAFSEGEVNKKNFRPYREIKNDISYALATI-----PEITGTTHINTHWLPHLGGRHTAVDVAIVVQPDLKVGAAHGVAKKARKAIEAIPYIVEADIHLEL 483          
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|566027880|gb|ETI50791.1| (hypothetical protein F443_05733 [Phytophthora parasitica P1569])

HSP 1 Score: 280.796 bits (717), Expect = 5.313e-83
Identity = 174/436 (39.91%), Postives = 252/436 (57.80%), Query Frame = 0
Query:  273 ESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTL------ALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTD-TVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVT--EPLPCPLAME-------LRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYV----SMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDL 688
            E+ ++T +G+Y N+ + A K   G+   S+A++ADA H+LSDL+SD+VTLW+V+++ LPPD  HPYG+G++E VGSL V A+L+L    I A  +  LQ  L      +LP    LPF    LS +  S  W                        ALA  AA  SI  KE LY  T  +G + NS+V++ANAWHHR+DAISS++ALGGIV + AG+  LDP+AG+ V AMI  TG +I LDS+ +LTD TVE++ +  +  V+ SV+ V   S VRARRMGP  LVDLR+ + ++ S S AQQ++++VR  + ++ P+VSEVLVH     +   C    E        R   +I+ D+  AL        P +     +  H++         VDV + + PDL V  A  VA++V+K +E I  + +A++HL+L
Sbjct:   82 EAMKITRVGMYVNVAMAATKGAVGLAIHSSALIADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYETVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFN-LPF----LSEIDRSTQW------------------------ALAAGAAGVSIAAKEALYHATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGMAVAAMIVKTGGEICLDSVQELTDNTVEAEVLETLEEVSGSVDDVLHVSQVRARRMGPYTLVDLRVHLHARTSISMAQQISERVRSHILQEVPDVSEVLVHIDVQFDQFSCSAFSEGEVNKKNFRPYREIKNDISYALATI-----PEITGTTHINTHWLPHLGGRHTAVDVAIVVQPDLKVGAAHGVAKKVRKAIEAIPYIVEADIHLEL 483          
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|568053588|gb|ETM50412.1| (hypothetical protein L914_05546 [Phytophthora parasitica] >gi|570331583|gb|ETO79531.1| hypothetical protein F444_05783 [Phytophthora parasitica P1976])

HSP 1 Score: 280.411 bits (716), Expect = 6.557e-83
Identity = 174/436 (39.91%), Postives = 252/436 (57.80%), Query Frame = 0
Query:  273 ESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTL------ALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTD-TVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVT--EPLPCPLAME-------LRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYV----SMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDL 688
            E+ ++T +G+Y N+ + A K   G+   S+A++ADA H+LSDL+SD+VTLW+V+++ LPPD  HPYG+G++EAVGSL V A+L+L    I A  +  LQ  L      +LP    LPF    LS +  S  W                        ALA  AA  SI  KE LY  T  +G + NS+V++ANAWHHR+DAISS++ALGGIV + AG+  LDP+AG+ V AMI  TG +I LDS+ +LTD TVE++ +  +  V+ SV+ V   S VRARRMGP  LVDLR+ + ++ S S AQQ++++VR  + ++ P+VSEVLVH     +   C    E        R   +I+ D+  AL        P +     +  H++         VDV + + PDL V  A  VA++ +K +E I  + +A++HL+L
Sbjct:   82 EAMKITRVGMYVNVAMAATKGAVGLAIHSSALIADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYEAVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFN-LPF----LSEIDRSTQW------------------------ALAAGAAGVSIAAKEALYHATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGMAVAAMIVKTGGEICLDSVQELTDNTVEAEVLETLEEVSGSVDDVLHVSQVRARRMGPYTLVDLRVHLHARTSISMAQQISERVRSHILQEVPDVSEVLVHIDVQFDQFSCSAFSEGEVNKKNFRPYREIKNDISYALATI-----PEITGTTHINTHWLPHLGGRHTAVDVAIVVQPDLKVGAAHGVAKKARKAIEAIPYIVEADIHLEL 483          
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|567993923|gb|ETL44089.1| (hypothetical protein L916_05538 [Phytophthora parasitica])

HSP 1 Score: 280.411 bits (716), Expect = 7.518e-83
Identity = 174/436 (39.91%), Postives = 252/436 (57.80%), Query Frame = 0
Query:  273 ESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTL------ALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTD-TVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVT--EPLPCPLAME-------LRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYV----SMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDL 688
            E+ ++T +G+Y N+ + A K   G+   S+A++ADA H+LSDL+SD+VTLW+V+++ LPPD  HPYG+G++EAVGSL V A+L+L    I A  +  LQ  L      +LP    LPF    LS +  S  W                        ALA  AA  SI  KE LY  T  +G + NS+V++ANAWHHR+DAISS++ALGGIV + AG+  LDP+AG+ V AMI  TG +I LDS+ +LTD TVE++ +  +  V+ SV+ V   S VRARRMGP  LVDLR+ + ++ S S AQQ++++VR  + ++ P+VSEVLVH     +   C    E        R   +I+ D+  AL        P +     +  H++         VDV + + PDL V  A  VA++ +K +E I  + +A++HL+L
Sbjct:   82 EAMKITRVGMYVNVAMAATKGAVGLAIHSSALIADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYEAVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFN-LPF----LSEIDRSTQW------------------------ALAAGAAGVSIAAKEALYHATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGMAVAAMIVKTGGEICLDSVQELTDNTVEAEVLETLEEVSGSVDDVLHVSQVRARRMGPYTLVDLRVHLHARTSISMAQQISERVRSHILQEVPDVSEVLVHIDVQFDQFSCSAFSEGEVNKKNFRPYREIKNDISYALATI-----PEITGTTHINTHWLPHLGGRHTAVDVAIVVQPDLKVGAAHGVAKKARKAIEAIPYIVEADIHLEL 483          
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|570990565|gb|ETP48489.1| (hypothetical protein F442_05781 [Phytophthora parasitica P10297])

HSP 1 Score: 280.026 bits (715), Expect = 1.121e-82
Identity = 174/436 (39.91%), Postives = 252/436 (57.80%), Query Frame = 0
Query:  273 ESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTL------ALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTD-TVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVT--EPLPCPLAME-------LRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYV----SMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDL 688
            E+ ++T +G+Y N+ + A K   G+   S+A++ADA H+LSDL+SD+VTLW+V+++ LPPD  HPYG+G++EAVGSL V A+L+L    I A  +  LQ  L      +LP    LPF    LS +  S  W                        ALA  AA  SI  KE LY  T  +G + NS+V++ANAWHHR+DAISS++ALGGIV + AG+  LDP+AG+ V AMI  TG +I LDS+ +LTD TVE++ +  +  V+ SV+ V   S VRARRMGP  LVDLR+ + ++ S S AQQ++++VR  + ++ P+VSEVLVH     +   C    E        R   +I+ D+  AL        P +     +  H++         VDV + + PDL V  A  VA++ +K +E I  + +A++HL+L
Sbjct:   82 EAMKITRVGMYVNVAMAATKGAVGLAIHSSALIADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYEAVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFN-LPF----LSEIDRSTQW------------------------ALAAGAAGVSIGAKEALYHATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGMAVAAMIVKTGGEICLDSVQELTDNTVEAEVLETLEEVSGSVDDVLHVSQVRARRMGPYTLVDLRVHLHARTSISMAQQISERVRSHILQEVPDVSEVLVHIDVQFDQFSCSAFSEGEVNKKNFRPYREIKNDISYALATI-----PEITGTTHINTHWLPHLGGRHTAVDVAIVVQPDLKVGAAHGVAKKARKAIEAIPYIVEADIHLEL 483          
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|675188727|ref|XP_008903248.1| (hypothetical protein PPTG_10328 [Phytophthora parasitica INRA-310] >gi|568096702|gb|ETN11449.1| hypothetical protein PPTG_10328 [Phytophthora parasitica INRA-310])

HSP 1 Score: 280.026 bits (715), Expect = 1.133e-82
Identity = 173/436 (39.68%), Postives = 251/436 (57.57%), Query Frame = 0
Query:  273 ESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTL------ALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTD-TVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVT--EPLPCPLAME-------LRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYV----SMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDL 688
            E+ ++T +G+Y N+ + A K   G+   S+A++ADA H+LSDL+SD+VTLW+V+++ LPPD  HPYG+G++EAVGSL V A+L+L    I A  +  LQ  L      +LP    LPF    LS +  S  W                        A A  AA  SI  KE LY  T  +G + NS+V++ANAWHHR+DAISS++ALGGIV + AG+  LDP+AG+ V AMI  TG +I LDS+ +LTD TVE++ +  +  V+ SV+ V   S VRARRMGP  LVDLR+ + ++ S S AQQ++++VR  + ++ P+VSEVLVH     +   C    E        R   +I+ D+  AL        P +     +  H++         VDV + + PDL V  A  VA++ +K +E I  + +A++HL+L
Sbjct:   82 EAMKITRVGMYVNVAMAATKGAVGLAIHSSALIADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYEAVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFN-LPF----LSEIDRSTQW------------------------AFAAGAAGVSIAAKEALYHATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGMAVAAMIVKTGGEICLDSVQELTDNTVEAEVLETLEEVSGSVDDVLHVSQVRARRMGPYTLVDLRVHLHARTSISMAQQISERVRSHILQEVPDVSEVLVHIDVQFDQFSCSAFSEGEVNKKNFRPYREIKNDISYALATI-----PEITGTTHINTHWLPHLGGRHTAVDVAIVVQPDLKVGAAHGVAKKARKAIEAIPYIVEADIHLEL 483          
BLAST of EWM29396.1 vs. NCBI_GenBank
Match: gi|568023199|gb|ETL97261.1| (hypothetical protein L917_05425 [Phytophthora parasitica])

HSP 1 Score: 279.256 bits (713), Expect = 1.781e-82
Identity = 173/436 (39.68%), Postives = 251/436 (57.57%), Query Frame = 0
Query:  273 ESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTL------ALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTD-TVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVT--EPLPCPLAME-------LRQPSDIEADVRAALGPDWAQQEPLVLAVRKVMVHYV----SMAPTVDVLLQIDPDLSVREAGEVARRVQKLLEGIKDVTKAEVHLDL 688
            E+ ++T +G+Y N+ + A K   G+   S+A++ADA H+LSDL+SD+VTLW+V+++ LPPD  HPYG+G++E VGSL V A+L+L    I A  +  LQ  L      +LP    LPF    LS +  S  W                        ALA  AA  SI  KE LY  T  +G + NS+V++ANAWHHR+DAISS++ALGGIV + AG+  LDP+AG+ V AMI  TG +I LDS+ +LTD TVE++ +  +  V+ SV+ V   S VRARRMGP  LVDLR+ + ++ S S AQQ++++VR  + ++ P+VSEVLVH     +   C    E        R   +I+ D+  AL        P +     +  H++         VDV + + PDL V  A  VA++ +K +E I  + +A++HL+L
Sbjct:   82 EAMKITRVGMYVNVAMAATKGAVGLAIHSSALIADAAHSLSDLLSDVVTLWSVKVARLPPDPKHPYGYGKYETVGSLSVGAILVLCGLGIGADGFQALQEILNGAGATSLPEFN-LPF----LSEIDRSTQW------------------------ALAAGAAGVSIAAKEALYHATVKIGKQANSKVLIANAWHHRTDAISSVVALGGIVGSMAGVPLLDPVAGMAVAAMIVKTGGEICLDSVQELTDNTVEAEVLETLEEVSGSVDDVLHVSQVRARRMGPYTLVDLRVHLHARTSISMAQQISERVRSHILQEVPDVSEVLVHIDVQFDQFSCSAFSEGEVNKKNFRPYREIKNDISYALATI-----PEITGTTHINTHWLPHLGGRHTAVDVAIVVQPDLKVGAAHGVAKKARKAIEAIPYIVEADIHLEL 483          
The following BLAST results are available for this feature:
BLAST of EWM29396.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111925|gb|EWM29396.1|0.000e+0100.00cation efflux protein [Nannochloropsis gaditana][more]
gi|298714904|emb|CBJ27660.1|4.119e-11840.47cation efflux protein [Ectocarpus siliculosus][more]
gi|567965209|gb|ETK90682.1|3.344e-8340.14hypothetical protein L915_05596 [Phytophthora para... [more]
gi|570955396|gb|ETP20561.1|4.537e-8339.91hypothetical protein F441_05741 [Phytophthora para... [more]
gi|566027880|gb|ETI50791.1|5.313e-8339.91hypothetical protein F443_05733 [Phytophthora para... [more]
gi|568053588|gb|ETM50412.1|6.557e-8339.91hypothetical protein L914_05546 [Phytophthora para... [more]
gi|567993923|gb|ETL44089.1|7.518e-8339.91hypothetical protein L916_05538 [Phytophthora para... [more]
gi|570990565|gb|ETP48489.1|1.121e-8239.91hypothetical protein F442_05781 [Phytophthora para... [more]
gi|675188727|ref|XP_008903248.1|1.133e-8239.68hypothetical protein PPTG_10328 [Phytophthora para... [more]
gi|568023199|gb|ETL97261.1|1.781e-8239.68hypothetical protein L917_05425 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1276rna1276Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications