EWM30583.1, cds124 (CDS) Nannochloropsis gaditana

Overview
NameEWM30583.1
Unique Namecds124
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:329552..329581 +
Alignment locationCM002455.1:329649..329718 +
Alignment locationCM002455.1:329940..329990 +
Alignment locationCM002455.1:330285..330388 +
Alignment locationCM002455.1:330695..330929 +
Alignment locationCM002455.1:331115..331647 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30583.1
ProductCell differentiation, Rcd1-like protein
Orig transcript idgnl|cribi|Naga_100033g52.8422.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:329552..329581 +
CM002455.1supercontigCM002455.1:329649..329718 +
CM002455.1supercontigCM002455.1:329940..329990 +
CM002455.1supercontigCM002455.1:330285..330388 +
CM002455.1supercontigCM002455.1:330695..330929 +
CM002455.1supercontigCM002455.1:331115..331647 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR007216Rcd1
IPR011989ARM-like
Homology
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|585113250|gb|EWM30583.1| (Cell differentiation, Rcd1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 696.812 bits (1797), Expect = 0.000e+0
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
Query:    1 MYEPVNVAPQSTPSLGPKRNTGTWPRARCSPAADAILLMLGMNPLNTLGAVNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 340
            MYEPVNVAPQSTPSLGPKRNTGTWPRARCSPAADAILLMLGMNPLNTLGAVNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA
Sbjct:    1 MYEPVNVAPQSTPSLGPKRNTGTWPRARCSPAADAILLMLGMNPLNTLGAVNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 340          
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|585113251|gb|EWM30584.1| (Cell differentiation, Rcd1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 591.652 bits (1524), Expect = 0.000e+0
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
Query:   51 VNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 340
            VNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA
Sbjct:   11 VNVSVPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 300          
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|585113252|gb|EWM30585.1| (Cell differentiation, Rcd1-like protein [Nannochloropsis gaditana] >gi|585113253|gb|EWM30586.1| Cell differentiation, Rcd1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 514.227 bits (1323), Expect = 0.000e+0
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
Query:   91 MELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 340
            MELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA
Sbjct:    1 MELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 250          
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|676387631|ref|XP_009037094.1| (hypothetical protein AURANDRAFT_69805 [Aureococcus anophagefferens] >gi|323452501|gb|EGB08375.1| hypothetical protein AURANDRAFT_69805 [Aureococcus anophagefferens])

HSP 1 Score: 437.573 bits (1124), Expect = 6.493e-152
Identity = 211/278 (75.90%), Postives = 248/278 (89.21%), Query Frame = 0
Query:   66 GGQAYEELIPLVLQLS---ELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 340
            G ++ EEL PLVLQL+       RE+AL+ELSKKRE + DLAP+LWHS GTM  LLQEI++IYPML+PP LTA ASNRVCNALALLQCVASH ETRGLFL AH+P+YLYPFLNTV SK+RPFEYLRLTSLGV+GALVK+DD++VI+FLLQTEIIPLCLRIMETG+ELSKTVATFIVQK+LLD+MGLNY+CATAERF+AVSTVL+NMV  L+E PS+RLLKHIVRCYLRLS+N RAR+ALRQCLP++LR D TF+  +KDD+T+ RWL++LLYNI+E A
Sbjct:    2 GEKSVEELYPLVLQLTVPDSPEHRESALLELSKKRETFTDLAPILWHSFGTMGTLLQEIVSIYPMLSPPNLTAHASNRVCNALALLQCVASHPETRGLFLNAHVPLYLYPFLNTV-SKNRPFEYLRLTSLGVVGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLNYVCATAERFYAVSTVLANMVLTLVEQPSIRLLKHIVRCYLRLSDNLRAREALRQCLPESLR-DHTFAGHIKDDLTVKRWLSSLLYNISEQA 277          
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|922865202|gb|KOO32309.1| (cell differentiation protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 433.721 bits (1114), Expect = 2.338e-150
Identity = 213/285 (74.74%), Postives = 248/285 (87.02%), Query Frame = 0
Query:   55 VPAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEG 339
            +P +S S+     +  +++  LVL+L+   +RETAL+ELSK+RE +PDLAP+LWHS GT++ALLQEI+AIYP+L+PP LTAQASNRVCNALALLQCVASH +TR LFL AHIP++LYPFLNTV SK+RPFEYLRLTSLGVIGALVKVDDA+VI+FLL TEIIPLCLRIMETG+ELSKTVATFIVQK+LLDE GL YICATAERF+AVSTVL+N+V AL+E PS RLLKHIVRC+LRLS+N RAR+ALRQCLPDALR D TFS CLKDDVT  RW   LL+NITE 
Sbjct:    7 LPGES-SMTPLNAEETDKIFVLVLELTNPDQRETALLELSKRRETFPDLAPILWHSFGTVSALLQEIVAIYPLLSPPALTAQASNRVCNALALLQCVASHPDTRTLFLNAHIPLFLYPFLNTV-SKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLANLVGALVEQPSGRLLKHIVRCFLRLSDNARAREALRQCLPDALR-DATFSACLKDDVTTKRWHTQLLFNITES 288          
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|551563190|ref|XP_005768296.1| (hypothetical protein EMIHUDRAFT_414254 [Emiliania huxleyi CCMP1516] >gi|551616220|ref|XP_005788958.1| hypothetical protein EMIHUDRAFT_455065 [Emiliania huxleyi CCMP1516] >gi|485618974|gb|EOD15867.1| hypothetical protein EMIHUDRAFT_414254 [Emiliania huxleyi CCMP1516] >gi|485642452|gb|EOD36529.1| hypothetical protein EMIHUDRAFT_455065 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 430.254 bits (1105), Expect = 4.377e-149
Identity = 212/284 (74.65%), Postives = 244/284 (85.92%), Query Frame = 0
Query:   56 PAQSNSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEG 339
            PAQ         +A E++  LVL+L+   +RE AL+ELSK+RE + DLAP+LWHS GT++ALLQEI+AIYP+L+PP+LTAQASNRVCNALALLQCVASH ETR LFL AHIP++LYPFLNT+ SK+RPFEYLRLTSLGVIGALVKVDD +VI+FLL TEIIPLCLRIMETG+ELSKTVATFIVQK+LLDE GL YICATAERF+AVSTVL N+V +L++ PS RLLKHIVRCYLRLS+NPRAR+ALRQCLPD LR D TFS CLKDDVT  RWL  LL+NITE 
Sbjct:    4 PAQRPDHTRPEDEA-EKIFHLVLELTNPEQREAALLELSKRRETFIDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTI-SKTRPFEYLRLTSLGVIGALVKVDDPDVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVDQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDVLR-DATFSACLKDDVTTKRWLTQLLFNITES 284          
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|301099265|ref|XP_002898724.1| (cell differentiation protein rcd1 [Phytophthora infestans T30-4] >gi|262104797|gb|EEY62849.1| cell differentiation protein rcd1 [Phytophthora infestans T30-4])

HSP 1 Score: 428.328 bits (1100), Expect = 6.590e-148
Identity = 208/281 (74.02%), Postives = 243/281 (86.48%), Query Frame = 0
Query:   60 NSLAGGGGQAYEELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 340
            NS      +A E+L  LVL+LS   +RE+AL+ELSKKRE +P+LAP+LWHS GT+AALLQEI+AIYP+L+PP LTA ASNRVCNALALLQCVASH+ETR  FL AHIP+YLYPFLNTV SK+RPFEYLRLTSLGVIGALVK+DD++VI+FLLQTEIIPLCLRIME G+ELSKTVATFIVQK+LLD+MGL YIC T ERF+AV TVLS MV  L+EVP+ RLLKHI+RCYLRLS+NPRA++ALRQCLP+ALR + TF + LKDD T +RWLA LLYNI+  A
Sbjct:   20 NSFILDDMEAPEQLYSLVLELSSPEQRESALLELSKKREEFPELAPILWHSFGTVAALLQEIVAIYPLLSPPQLTAHASNRVCNALALLQCVASHSETRTHFLNAHIPLYLYPFLNTV-SKNRPFEYLRLTSLGVIGALVKIDDSDVINFLLQTEIIPLCLRIMEAGSELSKTVATFIVQKILLDDMGLTYICHTPERFYAVGTVLSKMVATLVEVPAPRLLKHIIRCYLRLSDNPRAKEALRQCLPEALR-NHTFDEALKDDATTSRWLAQLLYNISTDA 298          
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|1214710739|gb|OWZ21802.1| (Cell differentiation protein rcd1 [Phytophthora megakarya])

HSP 1 Score: 423.32 bits (1087), Expect = 2.478e-146
Identity = 204/270 (75.56%), Postives = 237/270 (87.78%), Query Frame = 0
Query:   71 EELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 340
            E+L  LVL+LS   +RE+AL+ELSKKRE +P+LAP+LWHS GT+AALLQEI+AIYP+L+PP LTA ASNRVCNALALLQCVASH ETR  FL AHIP+YLYPFLNTV SK+RPFEYLRLTSLGVIGALVK+DD++VI+FLLQTEIIPLCLRIME G+ELSKTVATFIVQK+LLD+MGL YIC T ERF+AV TVLS MV  L+E P+ RLLKHI+RCYLRLS+NPRA++ALRQCLP+ALR + TF + LKDD T +RWLA LLYNI+  A
Sbjct:    5 EQLYALVLELSSPEQRESALLELSKKREEFPELAPILWHSFGTVAALLQEIVAIYPLLSPPQLTAHASNRVCNALALLQCVASHAETRTHFLNAHIPLYLYPFLNTV-SKNRPFEYLRLTSLGVIGALVKIDDSDVINFLLQTEIIPLCLRIMEAGSELSKTVATFIVQKILLDDMGLTYICHTPERFYAVGTVLSKMVATLVEAPAPRLLKHIIRCYLRLSDNPRAKEALRQCLPEALR-NHTFDEGLKDDATTSRWLAQLLYNISTDA 272          
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|298710510|emb|CBJ25574.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 425.246 bits (1092), Expect = 3.399e-146
Identity = 207/264 (78.41%), Postives = 238/264 (90.15%), Query Frame = 0
Query:   76 LVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEG 339
            LVLQL+   +RE AL+ELSKKRE + DLAP+LWHS GT++ALLQE++AIYP+L+PPTLT  ASNRVCNALALLQCVASH ETR LFL+AHIP+YLYPFLNTV SK+RPFEYLRLTSLGVIGALVK+DDAEVI+FLLQTEIIPLCLRIMETG+ELSKTVATFIVQK+LLDE GL YIC TAERF+AVSTVL NMV  L+E PSVRLLKH+VRCYLRLS+N RAR+ALRQCLPDALR++ TF+  LKDDV++ RWL +LL+N+TE 
Sbjct:   71 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTV-SKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNN-TFTNVLKDDVSVKRWLTSLLFNLTES 332          
BLAST of EWM30583.1 vs. NCBI_GenBank
Match: gi|695418130|ref|XP_009527321.1| (hypothetical protein PHYSODRAFT_559218 [Phytophthora sojae] >gi|348678446|gb|EGZ18263.1| hypothetical protein PHYSODRAFT_559218 [Phytophthora sojae])

HSP 1 Score: 422.55 bits (1085), Expect = 4.547e-146
Identity = 203/270 (75.19%), Postives = 238/270 (88.15%), Query Frame = 0
Query:   71 EELIPLVLQLSELSKRETALMELSKKREVYPDLAPVLWHSVGTMAALLQEIIAIYPMLTPPTLTAQASNRVCNALALLQCVASHTETRGLFLQAHIPMYLYPFLNTVMSKSRPFEYLRLTSLGVIGALVKVDDAEVISFLLQTEIIPLCLRIMETGNELSKTVATFIVQKVLLDEMGLNYICATAERFFAVSTVLSNMVQALIEVPSVRLLKHIVRCYLRLSENPRARDALRQCLPDALRSDQTFSQCLKDDVTINRWLANLLYNITEGA 340
            E+L  LVL+LS   +RE+AL+ELSKKRE +P+LAP+LWHS GT+AALLQEI+AIYP+L+PP LTA ASNRVCNALALLQCVASH+ETR  FL AHIP+YLYPFLNTV SK+RPFEYLRLTSLGVIGALVK+DD++VI+FLLQTEIIPLCLRIME G+ELSKTVATFIVQK+LLD+MGL YIC T ERF+AV TVLS MV  L+E P+ RLLKHI+RCYLRLS+NPRA++ALRQCLP+ALR + TF + LK+D T +RWLA LLYNI+  A
Sbjct:    3 EQLYALVLELSSPEQRESALLELSKKREEFPELAPILWHSFGTVAALLQEIVAIYPLLSPPQLTAHASNRVCNALALLQCVASHSETRTHFLNAHIPLYLYPFLNTV-SKNRPFEYLRLTSLGVIGALVKIDDSDVINFLLQTEIIPLCLRIMEAGSELSKTVATFIVQKILLDDMGLTYICHTPERFYAVGTVLSKMVAVLVEAPAPRLLKHIIRCYLRLSDNPRAKEALRQCLPEALR-NHTFDEALKEDATTSRWLAQLLYNISTDA 270          
The following BLAST results are available for this feature:
BLAST of EWM30583.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113250|gb|EWM30583.1|0.000e+0100.00Cell differentiation, Rcd1-like protein [Nannochlo... [more]
gi|585113251|gb|EWM30584.1|0.000e+0100.00Cell differentiation, Rcd1-like protein [Nannochlo... [more]
gi|585113252|gb|EWM30585.1|0.000e+0100.00Cell differentiation, Rcd1-like protein [Nannochlo... [more]
gi|676387631|ref|XP_009037094.1|6.493e-15275.90hypothetical protein AURANDRAFT_69805 [Aureococcus... [more]
gi|922865202|gb|KOO32309.1|2.338e-15074.74cell differentiation protein [Chrysochromulina sp.... [more]
gi|551563190|ref|XP_005768296.1|4.377e-14974.65hypothetical protein EMIHUDRAFT_414254 [Emiliania ... [more]
gi|301099265|ref|XP_002898724.1|6.590e-14874.02cell differentiation protein rcd1 [Phytophthora in... [more]
gi|1214710739|gb|OWZ21802.1|2.478e-14675.56Cell differentiation protein rcd1 [Phytophthora me... [more]
gi|298710510|emb|CBJ25574.1|3.399e-14678.41conserved unknown protein [Ectocarpus siliculosus][more]
gi|695418130|ref|XP_009527321.1|4.547e-14675.19hypothetical protein PHYSODRAFT_559218 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna124rna124Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications