EWM29427.1, cds1239 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|585111958|gb|EWM29427.1| (histidine ammonia-lyase [Nannochloropsis gaditana]) HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
Query: 1 MHRWKWLCWIDTMADAINEGNGLGPARMPLLSLGPSRRFTLADLTAVATGTAHLELEASVLESLPVASFFATSVSATLIDSAFSSLPAAPLTCSANFWTVAETRAILVARLASLVQGRAFVRREILERMLVLLNDASTFPPFRKGHEVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMVRPAVGAKGGRGGGGGGGGGGGGGEGEGDNEVLRCVPQVGVQGGG 293
MHRWKWLCWIDTMADAINEGNGLGPARMPLLSLGPSRRFTLADLTAVATGTAHLELEASVLESLPVASFFATSVSATLIDSAFSSLPAAPLTCSANFWTVAETRAILVARLASLVQGRAFVRREILERMLVLLNDASTFPPFRKGHEVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMVRPAVGAKGGRGGGGGGGGGGGGGEGEGDNEVLRCVPQVGVQGGG
Sbjct: 1 MHRWKWLCWIDTMADAINEGNGLGPARMPLLSLGPSRRFTLADLTAVATGTAHLELEASVLESLPVASFFATSVSATLIDSAFSSLPAAPLTCSANFWTVAETRAILVARLASLVQGRAFVRREILERMLVLLNDASTFPPFRKGHEVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMVRPAVGAKGGRGGGGGGGGGGGGGEGEGDNEVLRCVPQVGVQGGG 293
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|298714010|emb|CBJ27242.1| (Histidyl-tRNA Synthetase Similar to Histidine Ammonia-Lyase [Ectocarpus siliculosus]) HSP 1 Score: 76.6406 bits (187), Expect = 5.286e-12 Identity = 76/231 (32.90%), Postives = 111/231 (48.05%), Query Frame = 0
Query: 36 SRRFTLADLTAVATGTAHLELE-ASVLESLPVASFFATSVSATLIDSAFSSLPAAPLTCSANFWTVAETRAILVARLASLVQGRAFVRREILERMLVLLNDAST-FPPFRKGH------------------EVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGS 246
+R+ D+ VA A ++L AS+ ++ PV S + D AF+ A T + + + RA + AR+ SL+ GR+ +R E+L + +LN+ T P G EV L +L PL L+ E + L G + G AA+ A A N + AD AA+ CE T A+ PF AL+FD+ RPHRGQ+A A LRL+L+GS
Sbjct: 15 ARKVLPEDVLLVAVHGARVDLHPASLDKACPV-----PSTPSRGGDKAFAVSDGAGETVAESSRSETAARATIFARVVSLMNGRSGLRPEVLTLLCDMLNNGVTPLLPKDGGEGPSLARAVLGAGSCLFKGEVRPLLEVLSSCELSPLST-LTGREGSTLELGRFDQIGTAAVAAAAASNAIEIADGVAALTCEATRANTAPFDALNFDV-RPHRGQIACADRLRLMLDGS 238
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|759548523|ref|WP_043268343.1| (tyrosine 2,3-aminomutase [Streptomyces sp. CT34]) HSP 1 Score: 76.2554 bits (186), Expect = 6.767e-12 Identity = 67/206 (32.52%), Postives = 98/206 (47.57%), Query Frame = 0
Query: 78 LIDSAFSSLPAAPLTCSAN-----FWTVAETRAILVARLASLVQGRAFVRREILERMLVLLNDAST--FPP--------------------------FRKGHEVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMVR 250
L+D+A + A L S + ++ +E RAIL ARL +L +G + VR EIL+R+ + L++ T P + G VE +L+ EPL+ L E AL GT A TG L A A + V A++ + + E +S PFQ D+ RPHRGQ+A+A NLR L+ GS ++R
Sbjct: 82 LVDTAKETELQANLVRSHSAGVGPLFSESEARAILAARLNALARGYSAVRPEILQRLALYLSEGITPAIPEIGSLGASGDLAPLAHLAATVMGEGYLLKDGERVET-GPVLRSLGIEPLE--LRFKEGLALINGTSAMTGLGCLVATAALDQVRQAEIVSGLVVEALRSSAGPFQPEGHDIARPHRGQIASAANLRTLMRGSKLLR 284
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|1159772927|ref|WP_079319002.1| (tyrosine 2,3-aminomutase [Microbispora sp. GKU 823] >gi|1159092660|gb|OPG07007.1| tyrosine 2,3-aminomutase [Microbispora sp. GKU 823]) HSP 1 Score: 73.9442 bits (180), Expect = 3.393e-11 Identity = 70/217 (32.26%), Postives = 94/217 (43.32%), Query Frame = 0
Query: 102 ETRAILVARLASLVQGRAFVRREILERMLVLLNDAST--FPP--------------------------FRKGHEVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMVRPAVGAKGGRGGGGGGGGGGGGGEGE---GDNEVLRCVPQV 287
E RAIL AR+ +L +G + VR E++ER+ + LN T P R G V +L++ EPL+ L E AL GT A TG +L + V A++ A+ CEV +S PF A D+ RPHRGQ+ TA N+R LL GS + + G GG G E LR +PQV
Sbjct: 102 EARAILAARVNALAKGYSAVRPELIERLALYLNLGVTPAIPEIGSLGASGDLAPLSHIAATVIGEGYVLRDGRRVR-TGPVLRELGIEPLR--LRFKEGLALINGTSAMTGLGSLVVGRALDQVRQAEIVTALICEVLQSSTSPFGADGHDVARPHRGQIDTAANMRTLLHGSRLAVDHADLRRELSAGRDENGGRGVHRTEVYLQKAYTLRAIPQV 315
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|1121713971|ref|WP_073920837.1| (tyrosine 2,3-aminomutase [Streptomyces sp. CB00455] >gi|1115855722|gb|OKK14336.1| tyrosine ammonia-lyase [Streptomyces sp. CB00455]) HSP 1 Score: 73.9442 bits (180), Expect = 3.697e-11 Identity = 59/175 (33.71%), Postives = 86/175 (49.14%), Query Frame = 0
Query: 102 ETRAILVARLASLVQGRAFVRREILERMLVLLNDAST--------------FPPFR--------KGHEVEDLQ-----ALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMV 249
E RAI+ ARL +L +G + VR E+LER+ + LN+ T P +G+ ++D + +L++ EPLQ L E AL GT A TG +L + V A++ A+ E S PFQA D+ RPH+GQ+ TA N+R LL GS ++
Sbjct: 107 EARAIMAARLNALSKGYSAVRPELLERLALYLNEGITPAIPEIGSLGASGDLAPLSHIAGTLIGEGYVLKDGKRVPTAEVLREKGIEPLQ--LRFKEGLALINGTSAMTGLGSLVVARALDQVRQAEIGTALVLEALRGSTSPFQAEGHDIARPHQGQIDTAANMRALLSGSRLM 279
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|926395718|ref|WP_053723830.1| (tyrosine 2,3-aminomutase [Streptomyces sp. WM6378] >gi|925420832|gb|KOU54054.1| tyrosine ammonia-lyase [Streptomyces sp. WM6378]) HSP 1 Score: 73.559 bits (179), Expect = 4.565e-11 Identity = 61/182 (33.52%), Postives = 83/182 (45.60%), Query Frame = 0
Query: 97 FWTVAETRAILVARLASLVQGRAFVRREILERMLVLLNDAST--FPP--------------------------FRKGHEVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMVR 250
++ E RAIL RL +L +G + VR E+L+R+ + L + T P R G E +L+ EPL+ L E AL GT A TG L A + V A++A + EV +S PFQ D+ RPHRGQM TA NLR+L GS ++R
Sbjct: 95 LFSEREARAILATRLNALAKGYSAVRPELLQRLALYLTEGITPAIPEIGSLGASGDLAPLAHLAATVIGEGYVLRNGERAE-TGPVLRSLGIEPLR--LRFKEGLALINGTSAMTGVGCLVAGRALDQVRQAEIATGLVVEVLRSSASPFQPEGHDLARPHRGQMETATNLRVLTRGSRLLR 273
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|517561702|ref|WP_018731910.1| (tyrosine 2,3-aminomutase [Salinispora pacifica]) HSP 1 Score: 73.559 bits (179), Expect = 5.735e-11 Identity = 63/173 (36.42%), Postives = 80/173 (46.24%), Query Frame = 0
Query: 102 ETRAILVARLASLVQGRAFVRREILERMLVLLNDAST--FPP--------------------------FRKGHEVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGS 246
E RAILVARL +L +G + VR E+LER+ + LN T P R G V +L++ EPL+ L E +L GT TG +L V A++ A+ EV AS PFQA D+ RPHRGQM TA N+R LL GS
Sbjct: 102 EARAILVARLNALAKGHSAVRPELLERLALYLNLGITPAIPEIGSLGASGDLAPLAHLASTVIGEGYVLRHGRRVPT-GDVLREHGIEPLE--LRFKEGLSLINGTSGMTGLGSLVVGRALQQVRQAEIVTALVLEVLRASTSPFQAEGHDIARPHRGQMDTAANMRTLLRGS 271
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|1130978315|ref|WP_075741257.1| (MULTISPECIES: tyrosine 2,3-aminomutase [Actinoalloteichus] >gi|1130031224|gb|APU15545.1| tyrosine 2,3-aminomutase [Actinoalloteichus sp. ADI127-7] >gi|1130037292|gb|APU21612.1| tyrosine 2,3-aminomutase [Actinoalloteichus sp. GBA129-24]) HSP 1 Score: 73.1738 bits (178), Expect = 7.038e-11 Identity = 61/175 (34.86%), Postives = 81/175 (46.29%), Query Frame = 0
Query: 102 ETRAILVARLASLVQGRAFVRREILERMLVLLNDAST--FPP--------------------------FRKGHEVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAM 248
E RA+L ARL +L +G + VR E+LER+ + LN T P R G VE +L+Q EPL L E AL GT A TG AL N V A++ +A+ E S PF A D+ RPHRGQ+ +A N+R+L+ GS +
Sbjct: 102 EARAVLAARLNALAKGHSAVRPEVLERLALYLNLGITPAIPEIGSLGASGDLAPLAHIASSLIGEGYLLRDGVRVE-TGPVLRQLGIEPLS--LRFKEGLALINGTSAMTGLGALIVDRAVNQVRQAEIVSAMVIETLRGSTSPFLAEGHDVARPHRGQIDSAANMRMLMRGSGL 273
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|1121610702|ref|WP_073836153.1| (tyrosine 2,3-aminomutase [Micromonospora sp. CB01531] >gi|1115703058|gb|OKI62368.1| tyrosine 2,3-aminomutase [Micromonospora sp. CB01531]) HSP 1 Score: 73.1738 bits (178), Expect = 7.336e-11 Identity = 71/225 (31.56%), Postives = 100/225 (44.44%), Query Frame = 0
Query: 97 FWTVAETRAILVARLASLVQGRAFVRREILERMLVLLNDAST--------------FPPFR--------KGHEVEDLQAL-----LQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSA--ADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAMVRPAVGAKGGRGGGGGGGGGGGGGEGEGDNEV-----LRCVPQV 287
++ E RA++ ARL +L +G + VR +LER+ + LN+ T P +G+ + D Q + L+ EPL+ L E AL GT A TG AL A H L A A++AAA+ E SM PFQ D+ RPH GQ+A+A N+R L+ GS + + G G G D + LR +PQV
Sbjct: 97 LFSEPEARAVVAARLNALAKGHSAVRPLVLERLALYLNEGLTPAVPEIGSLGASGDLAPLAHIASSLIGEGYLLRDGQKVPTGPVLRALGIEPLR--LRFKEGLALINGTSAMTGVGAL--VASHTLAQARHAEIAAAMVIEALQGSMSPFQPEGHDIARPHAGQIASAANMRALMHGSRLTVEHADLRRQVAASKEKANGNGSGVHRSDVYLQKAYSLRAIPQV 317
BLAST of EWM29427.1 vs. NCBI_GenBank
Match: gi|759932559|ref|WP_043617829.1| (tyrosine 2,3-aminomutase [Nonomuraea candida]) HSP 1 Score: 72.7886 bits (177), Expect = 8.429e-11 Identity = 62/175 (35.43%), Postives = 82/175 (46.86%), Query Frame = 0
Query: 102 ETRAILVARLASLVQGRAFVRREILERMLVLLN------------------------DASTFP----PFRKGHEVEDLQALLQQPHPEPLQPPLSHTEANALRTGTYASTGPAALHAYAVHNLVSAADMAAAVACEVTHASMEPFQALHFDMHRPHRGQMATAMNLRLLLEGSAM 248
E RA+L ARL +L +G + VR E+LER+ + LN AST R G VE + +L++ EPLQ L E AL GT A TG L + V A++ A+ CEV S PF A D+ RPH+GQ+ A N+R LL GS +
Sbjct: 102 EARAVLAARLNALSKGYSAVRPELLERIALYLNLGITPAIPEIGSLGASGDLAPLAHVASTLIGEGYVLRDGRRVETGR-VLREFGIEPLQ--LRFKEGLALINGTSAMTGLGCLLVTRALDQVRQAEIVTALICEVLQGSTSPFVADGHDIARPHQGQIDVAANMRALLNGSGL 273 The following BLAST results are available for this feature:
BLAST of EWM29427.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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