EWM30596.1, cds123 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|585113263|gb|EWM30596.1| (selenocysteine-specific elongation factor [Nannochloropsis gaditana]) HSP 1 Score: 1917.12 bits (4965), Expect = 0.000e+0 Identity = 953/953 (100.00%), Postives = 953/953 (100.00%), Query Frame = 0
Query: 1 MCAEESETTSGLSQPVREAKAKKGPAANDPSLEAVDPASKAPTASASSSGSSSSSASSSPFHRFSSPQPSLASQPALPFNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLEALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDEKGGLAGGHVGDKLFLRFRRYVFDQEKRMVQRRQAGRDMSGLSLLLGEDTEPEVEVEGDRAEGGEENSVEGGPAEAGRREEVLDGDGVSEPREEEKRVLEGVDLSALEDSASHMYLGSQHPAARGNALRDGPRDEAVATEAVAAVPVQLGAEGDAEWRMGHIEKVRADGLVIVTGLFTMEEDVRNYKDLRVGLRTEEGQEAVEGYVVGPFGKGGKAKVQFPRECHGLEGAWVTLSFSLMPQGEETGKHEDE 953
MCAEESETTSGLSQPVREAKAKKGPAANDPSLEAVDPASKAPTASASSSGSSSSSASSSPFHRFSSPQPSLASQPALPFNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLEALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDEKGGLAGGHVGDKLFLRFRRYVFDQEKRMVQRRQAGRDMSGLSLLLGEDTEPEVEVEGDRAEGGEENSVEGGPAEAGRREEVLDGDGVSEPREEEKRVLEGVDLSALEDSASHMYLGSQHPAARGNALRDGPRDEAVATEAVAAVPVQLGAEGDAEWRMGHIEKVRADGLVIVTGLFTMEEDVRNYKDLRVGLRTEEGQEAVEGYVVGPFGKGGKAKVQFPRECHGLEGAWVTLSFSLMPQGEETGKHEDE
Sbjct: 1 MCAEESETTSGLSQPVREAKAKKGPAANDPSLEAVDPASKAPTASASSSGSSSSSASSSPFHRFSSPQPSLASQPALPFNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLEALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDEKGGLAGGHVGDKLFLRFRRYVFDQEKRMVQRRQAGRDMSGLSLLLGEDTEPEVEVEGDRAEGGEENSVEGGPAEAGRREEVLDGDGVSEPREEEKRVLEGVDLSALEDSASHMYLGSQHPAARGNALRDGPRDEAVATEAVAAVPVQLGAEGDAEWRMGHIEKVRADGLVIVTGLFTMEEDVRNYKDLRVGLRTEEGQEAVEGYVVGPFGKGGKAKVQFPRECHGLEGAWVTLSFSLMPQGEETGKHEDE 953
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|219109880|ref|XP_002176693.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411228|gb|EEC51156.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 464.922 bits (1195), Expect = 8.207e-150 Identity = 272/652 (41.72%), Postives = 381/652 (58.44%), Query Frame = 0
Query: 79 FNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGE---GVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLD-VDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLEALSE-EDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDEKGGLAGGHV--GDKLFLRFRRY 723
N+N+GV+GHVDSGKTSLV+ALST LSTA+LDK QS++RG+TLDLGFS F L PS +AS + LQ+TLVDCPGH SLIRTIIGGAQIID+VLL+VDA KG QAQT EC++LAE+T+P LVVALNK D FP ER++ + A A +R L+++RF +APIV VAA +GGE +S ++ S E + +E L + LQ + P+R+P G + +VDHCF ++G+GTVLTGTVL G SV DV+E P LGL R++KS+Q F R+V Q GDR G+C+++LDAK +ERG TPG+V + A+ VR++ + G + SG + H+SVGH T+MAT+TF+ D + P + + + G S G +A P F +EE++++Q ++ +++ +E +AL F+ PV CP+ LVIGSRLD VD ++ G+ CRLAF G L++++ +D+ ++R+Y PK R G+I RLG+ P D L R+ EV FKKET+++ F GM+V+T + ++G ++S FG GK RV F AG G+ L LRF+R+
Sbjct: 17 LNVNLGVLGHVDSGKTSLVKALSTLLSTAALDKSKQSRQRGMTLDLGFSCFFL--DMPSHLQASYPDKKNLQITLVDCPGHASLIRTIIGGAQIIDMVLLVVDAVKGWQAQTTECLVLAELTSPYLVVALNKADQFPPPERDQLLEQAAAKIRDRLKATRFANAPIVGVAACVGGEKVAAAS----------------------EDMSKLEVRNETY------NMETLVQTLQDKLPPPKRTPEGSFYFSVDHCFSIRGRGTVLTGTVLNGAASVNDVLEFPTLGLDRKIKSIQMFKRQVQRIQQGDRAGVCVSNLDAKLLERGIAATPGAVQLLKGAIALVRKVPYYVGTLHSGSKFHISVGHTTIMATVTFW-----------DLSVVNPVDTKPSKRYVGSSSLGGDADMAGLPRMTFSFEEEFIHQDDLLESLDGQES---------------------LLHWALLDFQIPVHCPMDSLVIGSRLDTVD-----------------NSTGS---------ASACRLAFSGRLMQSVDPGKDISKLRLYTPKERRGTISRLGD--PHKRTDDDKLVRY-EVFGSDLFKKETNMKAFFGMKVQTERNEIGEIKSSFGTSGKYRVFFP-----AGTEAKEGEPLILRFKRF 572
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|1169023133|ref|XP_020463431.1| (selenocysteine-specific elongation factor [Monopterus albus]) HSP 1 Score: 453.751 bits (1166), Expect = 1.841e-145 Identity = 276/695 (39.71%), Postives = 372/695 (53.53%), Query Frame = 0
Query: 79 FNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQ--TLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLE-----ALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDEKGGLAGGHVGDK---------------------------------LFLRFRRYVFDQEKRMVQ 733
N NVGV+GHVDSGKTSL RALS+ STA+ DK+PQS+ERGITLDLGFSSF + P + S Q +LQ TLVDCPGH SLIRTIIGGAQIIDL++L+VD KGVQ QT EC+++ E+T P +VV LNKIDL P+ +R+ + T L + L ++RF++ P++ VAA GG A P E P G+ +L L+K LP+R P G L MAVDHCF ++GQGTV+TGTVL+G +++ D VE+PAL +T+++KS+Q F + V+ A GDRVG+C+T D K +ERG +CTPGS+ + AV +VR+I F+G + + + H++VGH TVMA +TFFG P G + L +P + D PF ++ +Y YQ E V+ +GE R +Q+AL +FE PV CPL CLVIGS+LD DI HA CRLAF G LL+ + +E LPR+RIYK K +EG + R+ + V + FKKET+L+ F+G++V + G+ G +E GFG+ GK ++R E G H K + LRF+RYVFD K+MVQ
Sbjct: 12 LNFNVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSRERGITLDLGFSSFAV--DLPDHLQGSGGPQQYDSLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGVQTQTAECLLIGELTCPRMVVVLNKIDLLPSNKRQSAIEKMTKRLHKTLETTRFKECPVIAVAAKPGGPEA----------------------------------PDTEEPQ----GVPELIELLKKQTYLPQRDPGGDLLMAVDHCFSIRGQGTVMTGTVLQGSLAINDTVEIPALKVTKKIKSVQMFRKPVSGAMQGDRVGVCVTQFDPKLLERGLVCTPGSLHTLYAAVISVRKIGYFKGSLATRAKFHITVGHETVMARVTFFGL---------------PPVGTSEPRFDTEPLPLQPCS-LDTPFTFDREYFYQDEY-----------------VTSQGEARSN---PKQWALLEFERPVTCPLLCLVIGSKLDTDI----------------HA-------------NACRLAFQGRLLQGFEDKSYAETALPRLRIYKSKQKEGQVERVTD--------------DYTVIGRNLFKKETNLQLFVGLKVTLSTGESGVIEGGFGQSGKFKIRVQE-----GLHPETKQLLNSTSKKKGKGGSKGCPANEEEPKADSEPVSIHLRFKRYVFDPHKKMVQ 582
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|657780909|ref|XP_008318182.1| (PREDICTED: selenocysteine-specific elongation factor isoform X1 [Cynoglossus semilaevis] >gi|657780912|ref|XP_008318184.1| PREDICTED: selenocysteine-specific elongation factor isoform X1 [Cynoglossus semilaevis]) HSP 1 Score: 446.817 bits (1148), Expect = 9.586e-143 Identity = 269/689 (39.04%), Postives = 364/689 (52.83%), Query Frame = 0
Query: 79 FNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLEALSEED-----LPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDE------KGGLAGGHVGDK-----------------------LFLRFRRYVFDQEKRMVQ 733
N NVGV+GHVDSGKTSL RALS+ STA+ DK+PQS+ERGITLDLGFSSF + +LQ TLVDCPGH SLIRTIIGGAQIIDL++L+VD KGVQ QT EC+++ E+T P +VV LNKIDL P +R+ + T + + L S+RF++ P++ VAA GG A+ S E P G+ +L + L+K LP+R P+G L MAVDHCF ++GQGTV+TGT+L+G ++V D VE+PAL +T+++KS+Q F + V+ A GDRVG+C+T D K +ERG +CTPGS+ + AV +VR+I F+G + + + H++VGH TVMA ++FFG V E SD P + PF + +Y YQ E G+ EAG EQ+AL +FE PV CPL CLVIGS+LD DI HA CRLAF G LL+ +++ LP +RIYK K REG + R+ + V + FKKET+L+ F+G++V + G+ G +E GFG+ GK +VR + K L+ + L F+RY+FD K+MVQ
Sbjct: 14 LNFNVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSRERGITLDLGFSSFTVDLPDHLRDSGGQQPYDSLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGVQTQTAECLLIGELTCPRMVVVLNKIDLLPPNKRQAAIEKMTKRMHKTLESTRFKECPVIAVAAKPGGPEALDS----------------------------------EEPQ----GVPELIQLLKKQTYLPQRDPAGDLLMAVDHCFSIRGQGTVMTGTILQGSLAVNDTVEIPALKVTKKIKSVQMFRKPVSGAMQGDRVGVCVTQFDPKLLERGVVCTPGSLRTLYAAVISVRKIGYFKGSLSTRAKFHITVGHETVMAKVSFFGLPPAVA----------------SEVTSDTEPTPTPPSSLQTPFTQDREYFYQDEYV-------RGQGEAG-----------SGPDPEQWALLEFERPVTCPLFCLVIGSKLDADI----------------HA-------------NACRLAFQGRLLQGFEDKNYTETALPNLRIYKTKHREGQVERVSD--------------DYTVIGRNLFKKETNLQLFVGLKVTLSTGERGVIEGGFGQSGKFKVRIQDGLSSETKQSLSSTSKKKGKGGGRGGNEANEEEVRADSQPVGIHLHFKRYIFDPHKKMVQ 587
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|1143377072|ref|XP_019942365.1| (PREDICTED: selenocysteine-specific elongation factor [Paralichthys olivaceus]) HSP 1 Score: 446.817 bits (1148), Expect = 9.705e-143 Identity = 271/695 (38.99%), Postives = 365/695 (52.52%), Query Frame = 0
Query: 79 FNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDF--PFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLE-----ALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDEKGGLAGGHVGDK---------------------------------LFLRFRRYVFDQEKRMVQ 733
N NVGV+GHVDSGKTSL RALS+ STA+ DK+PQS+ERGITLDLGFSSF + P RAS +LQ TLVDCPGH SLIRTIIGGAQIIDL++L+VD KG+Q QT EC+++ E+T P +VV LNKIDL P +R+ + T L + L S+RF++ P++ VAA GG A P E P G+ L L+K LP+R P+G L MAVDHCF ++GQGTV+TGT+L+G +++ D VE+PAL +T+++KS+Q F + V+ A GDRVG+C+T D K +ERG +CTPGS+ + AV +VR+I F+G + + + H+++GH TVMA +TFFG P E D S + P P PF + Y YQ E + +GE +G + EQ+AL +FE PV CP CLVIGS+LD DI HA CRLAF G LL+ + +E LP + IYK K +EG + R+ + V + FKKET+L+ F+G++V + G+ G +E GFG+ GK ++R E G H K + L F+RY+FD K+MVQ
Sbjct: 13 LNFNVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSRERGITLDLGFSSFTV--DLPDQLRASGGQHDSLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGIQTQTAECLLIGELTCPRMVVVLNKIDLLPPNKRQSAIEKMTKRLHKTLESTRFKECPVIAVAAKPGGPEA----------------------------------PDAEEPQ----GVPQLIELLKKQTYLPQRDPAGDLLMAVDHCFSIRGQGTVMTGTILQGSLAINDTVEIPALKVTKKIKSVQMFRKPVSGAMQGDRVGVCVTQFDPKLLERGVVCTPGSLRTLYAAVISVRKIGYFKGSLATRAKFHITMGHETVMAKVTFFGLP--------------PVEASD----SSTDTKQPPSLPNSLETPFTCDRQYFYQDEYVTS-----QGESSSGPD-------------PEQWALLEFERPVTCPPLCLVIGSKLDRDI----------------HA-------------NACRLAFQGHLLQGFEDKSYAETALPHLHIYKTKHKEGQVERVSD--------------DYSVIGRNLFKKETNLQLFVGLKVTLSTGESGVIEGGFGQSGKFKIRIQE-----GLHPETKQMLSSTSKKKGKGGSKGGPGNEEESKADSQPVGIHLHFKRYIFDPHKKMVQ 583
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|736178020|ref|XP_010767810.1| (PREDICTED: selenocysteine-specific elongation factor [Notothenia coriiceps]) HSP 1 Score: 444.891 bits (1143), Expect = 1.929e-142 Identity = 260/635 (40.94%), Postives = 352/635 (55.43%), Query Frame = 0
Query: 79 FNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQ--TLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLEAL-----SEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDEKGG 706
N NVGV+GHVDSGKTSL R+LS+ STA+ DK+PQS+ERGITLDLGFSSF + P R S Q LQ TLVDCPGH SLIRTIIGGAQIIDL++L+VD KGVQ QT EC+++ E+T P +VV LNKIDL P +R+ + T L + L ++RF++ P++ VAA GG A P E P + +L L+K LP+R P G L MAVDHCF ++GQGTV+TGT+L+G +++ D VE+PAL +T+++KS+Q F R V+ A GDRVG+C+T D K +ERG +CTPGS+ + A+ +VR+I F+G + + + H++VGH TVMA +TFFG + ++ QP ++P P D PF +E +Y +Q E A +GE G + EQ+AL +FE PV CPL CLVIGS+LD DI HA CRLAF G LL+ +E LPR+RIYK K +EG + R+ + V + FKKET+L+ F+G++V + G+ G +E GFG+ GK ++R K
Sbjct: 12 LNFNVGVLGHVDSGKTSLARSLSSTASTAAFDKNPQSRERGITLDLGFSSFTV--ELPDHLRDSEGQKQYDNLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGVQTQTAECLLIGELTCPRMVVVLNKIDLLPPNKRQSAIEKMTKRLHKTLENTRFKECPVIAVAAKPGGPEA----------------------------------PDTEEPQ----AVPELIELLKKQTYLPQRDPKGDLLMAVDHCFSIRGQGTVMTGTILQGSLAINDTVEIPALKVTKKIKSVQMFRRPVSGAMQGDRVGVCVTQFDPKLLERGVVCTPGSLRTLYAALISVRKIGYFKGSLSTRAKFHITVGHETVMARVTFFGLPPL-GASERPSVTNQP--------------PSKP-CPLDTPFTFEREYFHQDEYVIA-----QGEASPGCD-------------PEQWALLEFERPVTCPLLCLVIGSKLDTDI----------------HA-------------NACRLAFQGRLLQGFEDKGYAESALPRLRIYKTKHKEGQVERVTD--------------DYTVIGRNLFKKETNLQLFIGLKVTLSTGETGVIEGGFGQSGKFKIRVQGKNN 529
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|1079720518|ref|XP_018529041.1| (PREDICTED: selenocysteine-specific elongation factor isoform X1 [Lates calcarifer]) HSP 1 Score: 444.506 bits (1142), Expect = 8.643e-142 Identity = 273/696 (39.22%), Postives = 369/696 (53.02%), Query Frame = 0
Query: 79 FNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQ--TLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPP------DFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLE-----ALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRF------DEKGGLAGGHVGD----------------------KLFLRFRRYVFDQEKRMVQ 733
N NVGV+GHVDSGKTSL RALS+ STA+ DK+PQS+ERGITLDLGFSSF + P R S Q +LQ TLVDCPGH SLIRTIIGGAQIIDL++L+VD KGVQ QT EC+++ E+T P +VV LNKIDL P +R+ + T L + L +RF+D P++ VAA GG A P E P G+ +L L+K LP+R P G L MAVDHCF ++GQGTV+TGT+L+G +++ D VE+PAL +T+++KS+Q F + V+ A GDRVG+C+T D K +ERG +CTPGS+ + A+ +VR+I F+G + + + H++VGH TVMA +TFFG GVS+ + +P PP D PF ++ +Y +Q E +GE +G + EQ+AL +FE PV CP LVIGS+LD DI HA CRLAF G LL+ + +E LPR+RIYK K +EG + R+ + V + FKKET+L+ F+G++V + G+ G +E GFG+ GK ++R D K L+ + L F+RYVFD K+MVQ
Sbjct: 13 LNFNVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSRERGITLDLGFSSFTV--DLPDQLRDSGGQQQYDSLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGVQTQTAECLLIGELTCPCMVVVLNKIDLLPPNKRQSAIEKMTKRLHKTLEGTRFKDCPVIAVAAKPGGPEA----------------------------------PDTEEPQ----GVPELIELLKKQTYLPKRDPGGDLLMAVDHCFSIRGQGTVMTGTILQGSLAINDTVEIPALKVTKKIKSVQMFRKPVSGAMQGDRVGVCVTQFDPKLLERGVVCTPGSLRTLYAAIISVRKIGYFKGSLATRAKFHITVGHETVMARVTFFGLPP--------------------AGVSEPPSDTKP--PPSLPCSLDTPFTFDREYFHQDEYVTG-----QGETSSGPD-------------PEQWALLEFERPVTCPSLSLVIGSKLDTDI----------------HAN-------------ACRLAFQGRLLQGFEDKSYAETALPRLRIYKTKHKEGQVERVSD--------------DYTVIGRNLFKKETNLQLFVGLKVTLSTGESGVIEGGFGQSGKFKIRIQEGLFPDTKQLLSSTSKKKGKGGSKDGPANEEEAKADSQPVSIHLHFKRYVFDPHKKMVQ 585
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|884969122|ref|XP_012993739.1| (PREDICTED: selenocysteine-specific elongation factor [Esox lucius]) HSP 1 Score: 443.736 bits (1140), Expect = 1.524e-141 Identity = 273/690 (39.57%), Postives = 365/690 (52.90%), Query Frame = 0
Query: 79 FNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFL--LPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAE-MAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLEALSEED-----LPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVR------FDEKGGLAGGHVGD---------------------KLFLRFRRYVFDQEKRMVQ 733
N NVGV+GHVDSGKTSL RALS+ STA+ DK+PQS+ERGITLDLGFSSF LP SR + LQ TLVDCPGH SLIRTIIGGAQIIDL++L+VD KG+Q QT EC+++ E+T P +VV LNK DL P +R+ V T L + L ++RF+D P++ VAA GG A + L DL L+ LPRR P G L MAVDHCF ++GQGTV+TGT+L+G ++V D VE+P L +T++VKS+Q F R VT A GDRVG+C+T D K +ERG +C+PGS+ + A+ +VR+I F+G + + + H++VGH TVMA +TFFG + L+ P+ +ARP D PF ++ +Y YQ E + G E + G EQ+AL +FE PV CP+ CLVIGS+LD DI HA CRLAF G LLE E+ LPR+RIYK K +EG + R+ + A+ + FKKET+L+ F G++V + G+ G +E GFG+ GK ++R + K LA + L+F+RY+FD +K+MVQ
Sbjct: 12 LNFNVGVLGHVDSGKTSLARALSSTSSTAAFDKNPQSRERGITLDLGFSSFTVDLPEKLREDSRHHGH--ENLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGIQTQTAECLLIGELTCPRMVVVLNKTDLLPPNKRQTVVDKMTKRLHKTLENTRFKDCPVIAVAAKPGGPEAPETEE--------------------------------------PTELSDLIELLKSQAYLPRRDPGGDLLMAVDHCFSIRGQGTVMTGTILQGALAVNDTVEIPVLKVTKKVKSIQMFRRPVTGAMQGDRVGVCVTQFDPKLLERGVVCSPGSLRTLQAAIISVRKIGYFKGSLATRAKFHITVGHETVMARVTFFGLP-------PEETLQSPQP---------PAPDARPL---DTPFSFDREYFYQDEYVIGQREAQGAGPDP------------------EQWALLEFERPVTCPVLCLVIGSKLDTDI----------------HAN-------------ACRLAFQGRLLEGFEEKSYAETTLPRLRIYKSKHKEGQVERVTDDYTAI--------------GRNLFKKETNLQLFAGLKVTLSTGEAGVIEGGFGQSGKFKIRVPDGLSLETKQLLASTKKKGKGVTKGDPGKEEEAKAESQPISINLQFKRYIFDPDKKMVQ 581
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|1211386681|ref|XP_021465634.1| (selenocysteine-specific elongation factor [Oncorhynchus mykiss] >gi|642104335|emb|CDQ74722.1| unnamed protein product [Oncorhynchus mykiss]) HSP 1 Score: 443.351 bits (1139), Expect = 2.934e-141 Identity = 272/688 (39.53%), Postives = 366/688 (53.20%), Query Frame = 0
Query: 79 FNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLE-----ALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDE--------------KGGLAGGHVGDK--------------LFLRFRRYVFDQEKRMVQ 733
N NVGV+GHVDSGKTSL RALS+ STA+ DK+PQS+ERGITLDLGFSSF + LQ TLVDCPGH SLIRTIIGGAQIIDL++L+VD KG+Q QT EC+++ E+T P +VV LNK DL P +R+ + T L + L ++RF+D P++ ++A GG A P E P G+ +L L+ LP R P G L MAVDHCF ++GQGTV+TGT+L+G ++V D VE+PAL +T++VKS+Q F R VT A GDRVG+C+T D K +ERG +CTPGS+ + A+ +VR+I F+G + + + H++VGH TVMA +TFFG + G P+ S+ L P D PF ++ +Y +Q E G++EAG + EQ+AL +FE PV CP CLVIGS+LD DI HA CRLAF G LLE + SE L R+RIYK K +EG + R+ + V + FKKET+L+ F+G++V + G+ G +E GFG+ GK ++R + K + GG G+ + LRF+RYVFD K+MVQ
Sbjct: 12 LNFNVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSRERGITLDLGFSSFNVDLPEQLREDPGGHGYDNLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGIQTQTAECLLIGELTCPRMVVILNKTDLLPPNKRQTAIDKMTKRLHKTLENTRFKDCPVIALSAKPGGPEA----------------------------------PETEEPH----GVPELIELLKSQTYLPHRDPGGALLMAVDHCFSIRGQGTVMTGTILQGALAVNDTVEIPALKVTKKVKSVQMFRRPVTGAMQGDRVGVCVTQFDPKLLERGVVCTPGSLHTLHAAIISVRKIGYFKGSLATRAKFHITVGHETVMARVTFFG---LPPGETHQASTTDPQLPTSDPHASEPDLR-----PLDTPFSFDREYFHQDEYV-------IGQREAG----------GAGQDPEQWALLEFEHPVTCPTLCLVIGSKLDTDI----------------HAN-------------VCRLAFQGRLLEGFEEKSYSETTLLRLRIYKTKHKEGQVERVTDDY--------------TVIGRNLFKKETNLQLFVGLKVTLSTGEEGVIEGGFGQSGKFKIRVPDGLSLETKQLLSSSAKKRVKGGAKGEPAKEDDAKTDSQPICINLRFKRYVFDPHKKMVQ 593
BLAST of EWM30596.1 vs. NCBI_GenBank
Match: gi|929290845|ref|XP_014022593.1| (PREDICTED: selenocysteine-specific elongation factor-like isoform X1 [Salmo salar]) HSP 1 Score: 442.965 bits (1138), Expect = 4.543e-141 Identity = 273/688 (39.68%), Postives = 368/688 (53.49%), Query Frame = 0
Query: 79 FNINVGVMGHVDSGKTSLVRALSTHLSTASLDKHPQSQERGITLDLGFSSFLLPYSAPSPSRASSSTPQTLQVTLVDCPGHGSLIRTIIGGAQIIDLVLLLVDATKGVQAQTVECVMLAEVTAPTLVVALNKIDLFPAEEREEKVRAATAALRRALRSSRFQDAPIVPVAAVMGGETAVGSSSRGVGSGRGGGEKQKGGAAGKRKENSGTRPPGEEHPGIMSLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPLKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRRVTEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGDRIHVSVGHGTVMATLTFFGAKEMVRGRQKDRKLRQPREGRDGEGVSDDGLEARPWAPPDFPFCWEEDYLYQAEMAGAVEDEEEGEKEAGFEVSKEGERRRRREYQEQYALFKFETPVLCPLPCLVIGSRLDVDIGHRQHPEPPDRQQKPTHAQGAREGRLSPVWKGGCRLAFCGTLLE-----ALSEEDLPRVRIYKPKMREGSIYRLGEALPALPKDPPSLARHREVTAQGFFKKETSLRPFLGMEVETAKGQVGRLESGFGRGGKVRVRFDE--------------KGGLAGGHVGDK--------------LFLRFRRYVFDQEKRMVQ 733
N NVGV+GHVDSGKTSL RALS+ STA+ DK+PQS+ERGITLDLGFSSF + LQ TLVDCPGH SLIRTIIGGAQIIDL++L+VD KG+Q QT EC+++ E+T P +VV LNK DL P +R+ + T L + L ++RF+D P++ ++A GG A P E P G+ +L L+ LP R P G L MAVDHCF ++GQGTV+TGT+L+G ++V D VE+PAL +T++VKS+Q F R V A GDRVG+C+T D K +ERG +CTP S+ + A+ +VR+I F+G + + + H++VGH TVMA +TFFG + G P+ S+ + RP D PF ++ +Y +Q E G+++AG G+ EQ+AL +FE PV CP CLVIGS+LD DI HA CRLAF G LLE + SE LPR+RIYK K +EG + R+ + V + FKKET+L+ F+G++V +KG+ G +E GFG+ GK ++R E K + GG G+ + LRF+RYVFD K+MVQ
Sbjct: 12 LNFNVGVLGHVDSGKTSLARALSSTASTAAFDKNPQSRERGITLDLGFSSFTVDLPEQLREDPGGHGYAKLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVVDVVKGIQTQTAECLLIGELTCPRMVVILNKTDLLPPNKRQTAIDKMTKRLHKTLENTRFKDCPVIALSAKPGGPEA----------------------------------PETEEPH----GVPELIELLKSQTYLPHRDPGGALLMAVDHCFSIRGQGTVMTGTILQGALAVNDTVEIPALKVTKKVKSVQMFRRPVAGAMQGDRVGVCVTQFDPKLLERGVVCTPDSLHTLHAALISVRKIGYFKGSLATRAKFHITVGHETVMARVTFFG---LPPGETHQTSTTDPQLPTLDPHASEP--DRRPL---DTPFSFDREYFHQDEYV-------IGQRQAG----GAGQD------PEQWALLEFERPVTCPTLCLVIGSKLDTDI----------------HAN-------------ACRLAFQGRLLEGFEEKSYSETTLPRLRIYKTKHKEGQVERVTD--------------DYTVIGRNLFKKETNLQLFVGLKVTLSKGEAGVIEGGFGQSGKFKIRVPEGLSLETKQLLSSSAKKRVKGGAKGEPAKEDDAKTDSQPICINLRFKRYVFDPHKKMVQ 593 The following BLAST results are available for this feature:
BLAST of EWM30596.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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