EWM29469.1, cds1208 (CDS) Nannochloropsis gaditana

Overview
NameEWM29469.1
Unique Namecds1208
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:59983..60118 -
Alignment locationCM002457.1:59705..59822 -
Alignment locationCM002457.1:59311..59431 -
Alignment locationCM002457.1:58884..58955 -
Alignment locationCM002457.1:58630..58719 -
Alignment locationCM002457.1:58335..58433 -
Alignment locationCM002457.1:57968..58177 -
Alignment locationCM002457.1:57628..57754 -
Alignment locationCM002457.1:57401..57451 -
Alignment locationCM002457.1:57233..57279 -
Alignment locationCM002457.1:56951..57120 -
Alignment locationCM002457.1:56713..56844 -
Alignment locationCM002457.1:56527..56614 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29469.1
Productmmpl domain protein
Orig transcript idgnl|cribi|Naga_100449g1.9457.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:59983..60118 -
CM002457.1supercontigCM002457.1:59705..59822 -
CM002457.1supercontigCM002457.1:59311..59431 -
CM002457.1supercontigCM002457.1:58884..58955 -
CM002457.1supercontigCM002457.1:58630..58719 -
CM002457.1supercontigCM002457.1:58335..58433 -
CM002457.1supercontigCM002457.1:57968..58177 -
CM002457.1supercontigCM002457.1:57628..57754 -
CM002457.1supercontigCM002457.1:57401..57451 -
CM002457.1supercontigCM002457.1:57233..57279 -
CM002457.1supercontigCM002457.1:56951..57120 -
CM002457.1supercontigCM002457.1:56713..56844 -
CM002457.1supercontigCM002457.1:56527..56614 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR004869MMPL_dom
Homology
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|585112007|gb|EWM29469.1| (mmpl domain protein [Nannochloropsis gaditana])

HSP 1 Score: 989.949 bits (2558), Expect = 0.000e+0
Identity = 486/486 (100.00%), Postives = 486/486 (100.00%), Query Frame = 0
Query:    1 MPLLLFPFPSYQRFISHKPYGLGALLLLLALALPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSEDIFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAALNATVPTTRQFTLQTLRDTLVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILKGSESSSGLTLHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWPRQRLPTPTKDLCPEEYIVCVRPASFEGKVIPASEKEQKTGQHVRWHCSHCFSSGARPPPRFELTNIQTTAAINGSMKSRQFQAHAASFS 486
            MPLLLFPFPSYQRFISHKPYGLGALLLLLALALPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSEDIFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAALNATVPTTRQFTLQTLRDTLVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILKGSESSSGLTLHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWPRQRLPTPTKDLCPEEYIVCVRPASFEGKVIPASEKEQKTGQHVRWHCSHCFSSGARPPPRFELTNIQTTAAINGSMKSRQFQAHAASFS
Sbjct:    1 MPLLLFPFPSYQRFISHKPYGLGALLLLLALALPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSEDIFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAALNATVPTTRQFTLQTLRDTLVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILKGSESSSGLTLHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWPRQRLPTPTKDLCPEEYIVCVRPASFEGKVIPASEKEQKTGQHVRWHCSHCFSSGARPPPRFELTNIQTTAAINGSMKSRQFQAHAASFS 486          
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|514698892|ref|XP_004997015.1| (hypothetical protein PTSG_11885 [Salpingoeca rosetta] >gi|326436241|gb|EGD81811.1| hypothetical protein PTSG_11885 [Salpingoeca rosetta])

HSP 1 Score: 288.5 bits (737), Expect = 4.671e-85
Identity = 156/399 (39.10%), Postives = 239/399 (59.90%), Query Frame = 0
Query:   10 SYQRFISHKPYGLGALLLLLALALPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFI--DSEDIFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAAL-NATVPTTRQFTLQTLRDTLVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILKGSESSSGLTLHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRAL-GQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWPRQRLPTP 404
             + +F+      +  +++++ LA+P A++++  + S     + P  + +    + +S N+G  G + PY ++    ++  + TP ++AA    +   +    P++ +    IM   G  + +A +  AL N + P  R   L   RDT V+SN  A Y   TL  DPYS+EG  W+   R  L    + +     +   A + +D    V   FPT + +T A VF LIG+A+RSI  PLR++LTIA+TL FVYG ++ VYQ+G  DG+GL  L GQ  +L+W+  VM FSI+VGLGLDYDVFL++R++EYR +  +D  +++ G+  TG IITAAGIIMA+AF GLLF++E +LNQ +F LV +VL+DTFI+R+ +VP LM   G + WWP  R+PTP
Sbjct:  436 KFGKFLMRPAVSILLVVVVVGLAIPCAMRVRSFDRSSSIINIAPRTASATKAFKDLSVNFG-PGTLAPYDILVRPRNASSVLTPDTFAAAKTAIEDHLMKVKPVDKVQYESIMYFDGNFLPFAFVDIALKNCSKPVNRPICLA--RDTFVNSNATALYIEATLDFDPYSTEGVNWLQNARKALANVSAETDTEFIIANGATISNDVERKVYDLFPTAVGVTTAFVFLLIGIAFRSIAIPLRAILTIAMTLAFVYGCSIWVYQFGVLDGIGLPGLSGQLKALSWITPVMAFSILVGLGLDYDVFLLSRVVEYRKDGFSDYDSVLLGLARTGGIITAAGIIMAIAFVGLLFTAEAVLNQLSFYLVFAVLIDTFIIRSAVVPALMRLIGRFNWWP-SRMPTP 830          
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|923136955|ref|XP_013761942.1| (MmpL efflux pump [Thecamonas trahens ATCC 50062] >gi|906560382|gb|KNC53625.1| MmpL efflux pump [Thecamonas trahens ATCC 50062])

HSP 1 Score: 229.95 bits (585), Expect = 9.957e-63
Identity = 149/390 (38.21%), Postives = 214/390 (54.87%), Query Frame = 0
Query:   19 PYGLGALLLLLALALPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFI---DSEDIFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAALNAT---VPTTRQFTLQTLRDTLVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILKGSESSSGLTLHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWPRQRLP 402
            PY +  L+L++A  +P  +   +   S   DL LP GS   +    +   +G  G V+PY ++     ++  + TP   AA  H + + +   P  +  D TG+    G+ + YA +    +A      ++    L+T + T VSS+  A     T   DP S  G  W    R  L G  +  GL  +L G  A    A+ S    FP MISIT  VV  ++GVA+RS++ PLR+VLTI LT+  VYG+A   Y++   +   +  L   GS+ WLP V+ F I+VG+ LDYD+F  TR+ EYR      + A ++G+  TG IITAAGIIMA+AFSGLL S+  ++NQ AF LV SVL DTF+VRTFLVP +M++ G + WWP +  P
Sbjct:  526 PYNVIILILVVAATIPFDMHALNYSPSDAIDLDLPRGSIVTDAYLDMCGEFG-YGKVYPYWILIEAPGNTSVLSTPFFKAA--HDVVNTLSRLPNTQPSDFTGVAYANGEAIPYALLEICNDAAGEAYNSSDCRGLRTAQQTFVSSDAHAMLFEFTPLFDPISRFGHTWYKEARTSLNGLSAKHGLDFYLAGMPAGSWSAIESAYYWFPIMISITAGVVLVMVGVAFRSVLMPLRAVLTIGLTIICVYGMATLTYEYSLLEWTHIPGLHSFGSIEWLPPVVVFPIVVGITLDYDIFYTTRVQEYRSTGLATRDAAIKGLSRTGSIITAAGIIMAIAFSGLLLSNVAVINQLAFYLVFSVLFDTFVVRTFLVPSIMSFFGDWNWWPGRLAP 912          
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|553179410|ref|XP_005852698.1| (mmpl domain protein [Nannochloropsis gaditana CCMP526] >gi|422295836|gb|EKU23135.1| mmpl domain protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 207.994 bits (528), Expect = 1.726e-58
Identity = 109/137 (79.56%), Postives = 111/137 (81.02%), Query Frame = 0
Query:   14 FISHKPYGLGALLLLLALALPVAVQLKDMETS-------------------------VEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSEDIFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQ 125
            FISHKPYGLGALLLLLALALPVAVQLKDMETS                         +EFDLMLPFGSGS NTLETISSNYGGAGVVFPYKVIFIDSEDIFTPQSYAAM+HVLASLVESAPPLELMDVTGIMVLGGQ
Sbjct:  245 FISHKPYGLGALLLLLALALPVAVQLKDMETSGRRAEKKEIERACGGFKPYDVKGTYIEFDLMLPFGSGSYNTLETISSNYGGAGVVFPYKVIFIDSEDIFTPQSYAAMNHVLASLVESAPPLELMDVTGIMVLGGQ 381          
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|569407331|gb|ETO23039.1| (MmpL efflux pump, partial [Reticulomyxa filosa])

HSP 1 Score: 197.593 bits (501), Expect = 7.209e-54
Identity = 132/391 (33.76%), Postives = 212/391 (54.22%), Query Frame = 0
Query:   19 PYGLGALLLLLALALPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSEDIFTPQSYAAMSHVLASLVESAPPLELMDVTG-IMVLGGQEVSYA--EMTAALNATVPTTRQFTLQTLRD-------------TLVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILK---GSESSSGLT--LHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMT 388
            PY L  ++++ AL  P+  ++ D+   ++  L+ P  S    T + +  ++   G++  + VI  D      P+  A  S       ++      ++ TG IM    ++++ A   M++++  +V   R FT Q   D             + +SS+   TY  +    DPY S    ++   RD +    G+ + S ++   +L G +    D V ++ + FP ++   + +VF ++G  + S   PLR  +TIA+ LT VYGL++ VYQ G  +GL   A+G +  L WL  VM  +I++GL LDYDVFL  R+ EYR+     + ++VRG+ NTG IITAAG+IMA+AF GLLFS    LNQT F+LVV+VL+DTFI+RT LVP +++
Sbjct:   56 PYSLIIIIVVYALIAPIGWRIVDLRKQLDDTLVFPRDSQYLATYKDVEKDFS-PGILASWYVIIPD------PEYEAGNSD------KNVHSWTYVNDTGTIMTAFYEQLAAAGYPMSSSIGVSVWDNRTFTNQQEYDYAARSSAYNDFVSSFISSDNSTTYFKMISAFDPYYSNAIDFVSYARDTMSNLCGTAAPSKMSYRCYLTGGSTNEVDLVNTIFAQFPYVLLGIVMLVFCIMGAFFASAFVPLRLFITIAVPLTLVYGLSISVYQDGWLEGLHWSAVGNTQGLYWLSPVMTITILIGLALDYDVFLFARVYEYRVHGLPTRESIVRGVYNTGSIITAAGVIMAIAFCGLLFSQMTSLNQTGFILVVAVLVDTFIIRTLLVPAVLS 433          
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|514689378|ref|XP_004992264.1| (hypothetical protein PTSG_06862 [Salpingoeca rosetta] >gi|326429641|gb|EGD75211.1| hypothetical protein PTSG_06862 [Salpingoeca rosetta])

HSP 1 Score: 200.675 bits (509), Expect = 1.336e-52
Identity = 124/360 (34.44%), Postives = 196/360 (54.44%), Query Frame = 0
Query:   49 DLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSE-DIFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAAL---NAT--VPTTRQFTLQTLRDTLVSSNGKATYATLTLT-----IDPYSSEGQAWIDTVRDILKGSESSSGLTLHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWP 397
            D   P   G       +S+ +G AG + P+ ++   +   + T Q +  ++ V   L  + P + + D  G+ +  G  VS+ +  +     N T  VP  +Q        T  + N   T   L L      +D  S+ GQ WI   R  ++  +   G+ + L        D +  V   F   I+   AVVF L+ +A+RS+   L++VL+IALT   VYG++ CVY +G F  LG  +L  +G L W+P ++ F+I+VGLGLDY +FL++R++E+R     D+ +++ G+  TG +ITAAG+IMA+AF GLLFS E ++ Q AF +V++VL+DTF+VR  LVP +M+  G + WWP
Sbjct:  480 DCECPQNYGVVKDFYAVSNTFG-AGYILPFGLLIEAANGSLLTQQHFNNVAAVCNHLAAALPDVHVSDFDGLAINNGVPVSFTDEVSPCFFPNGTTDVPCYQQTPPVECVRTCFNKNYFTTNDALDLVWLRPRVDGSSARGQKWIHRARAEIETLQEQLGVRIMLARGGVEDVDMIAHVFGRFHVAIASVAAVVFVLMLLAFRSVAIALKAVLSIALTQGLVYGISTCVYDYGIFAFLGWNSLAPTGGLCWIPSILVFTILVGLGLDYHIFLLSRVVEFRRLGFDDEESVLLGLARTGRVITAAGVIMAIAFLGLLFSHEALVQQLAFFIVIAVLIDTFVVRACLVPAMMSVLGRFNWWP 838          
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|569384424|gb|ETO16373.1| (hypothetical protein RFI_20979 [Reticulomyxa filosa])

HSP 1 Score: 186.037 bits (471), Expect = 8.846e-52
Identity = 105/235 (44.68%), Postives = 148/235 (62.98%), Query Frame = 0
Query:  160 GKATYATLTLTIDPYSSEGQAWIDTVRDILK-----GSESSSGLTLHLDGPAAVIHDAVGSVLSAFP-TMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMT 388
             +A+Y  +  + DPY S    ++   RD++      G+ S +    +L G +A   D V ++ S FP  ++ I LAV F ++G+ + S   P+R  +TIA+ LT VYGL++ VYQ G   GL   AL  +  L WL  VM  +I++GL LDYDVFL  R+ EYR+     + A+VRG+ NTG IITAAG+IMA+AF GLLFS    LNQT F+LVV+VL+DTFI+RT LVP +++
Sbjct:    2 NEASYFQMISSFDPYYSNAIEFVSHCRDVMNNLCENGAPSGASYKCYLTGGSANEVDLVNTIFSQFPFVLLGIVLAV-FCIMGLCFASAFVPIRLFITIAVPLTLVYGLSILVYQKGLLSGLHWSALANTHGLYWLTPVMTVTILIGLALDYDVFLFARVYEYRLLGLPTREAIVRGIYNTGSIITAAGVIMAIAFCGLLFSEITSLNQTGFILVVAVLVDTFIIRTLLVPAVLS 235          
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|294866928|ref|XP_002764888.1| (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >gi|239864724|gb|EEQ97605.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983])

HSP 1 Score: 192.2 bits (487), Expect = 1.284e-49
Identity = 130/412 (31.55%), Postives = 218/412 (52.91%), Query Frame = 0
Query:   11 YQRFISHKPYGLGALLLLLALALPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSED-IFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAALNATVPTTR-QFTLQTLRDT-----------------LVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILKGSESSSGLTLHL--DGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQ--SGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWPRQ 399
            + +F +     L A+ +++ L +P  + + +METS +  L+ P G  +  TLE I  ++   G+  PY ++    +  IF    Y    H   S  E     EL+D    +++G    + A +      +VPT R  +++  L ++                  ++  G A  ATL     P S+  + ++  +R ++    S  G  + +  +G +   +D+  +V+ +F   + I L +   ++G  Y+SI+ PLRSV+TI +TL F +G  + V+Q G F+GL    L    S  L+W+ + +CF++++GL LDY++FL+ RI E R   + D+ ++  G+  TG +I+ AGIIMAVAF GL+ +S  +LNQ  FLLVV+VLLDTF+VR F+ P LM   G + WWP +
Sbjct:  456 WAKFTTKWYSTLLAVAIVIGLGVPFTIFVTEMETSPDMTLLQPRGMSTAETLERIQESFS-PGLWAPYTIMLGSKQGVIFDSPDYW---HAAQSFQE-----ELVDT---LLVGQNTSALASIMLVKIDSVPTMRVPYSMAKLANSPLCKLDICSYFQEGLEATMNPAGTAVTATLVADQAPTSTASEKFVYNLRALVDKYNSQYGDVIEIIENGVSCETYDSNRAVMGSFVITLGIILGICIVVVGFLYQSILIPLRSVVTIYITLVFSFGFTIGVFQLGWFNGLNCATLSSEVSQGLSWVVVPICFAVVLGLSLDYEIFLLGRITESRHLGYGDKASIEIGVWKTGSVISMAGIIMAVAFLGLVLTSSPMLNQAGFLLVVAVLLDTFVVRPFMTPALMAILGRWNWWPHK 855          
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|471204793|ref|XP_004259185.1| (MmpL efflux pump, putative, partial [Entamoeba invadens IP1] >gi|440299888|gb|ELP92414.1| MmpL efflux pump, putative, partial [Entamoeba invadens IP1])

HSP 1 Score: 181.03 bits (458), Expect = 2.104e-47
Identity = 117/389 (30.08%), Postives = 202/389 (51.93%), Query Frame = 0
Query:   14 FISHKPYGLGALLLLLALALPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSEDI--FTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAALNATVPTTRQFTLQTLRDTLVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILKG-SESSSGLTLHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWPRQ 399
            FIS+K Y L  +++++ + +P  V +KD   +   + ++P  S S  T   I + Y   GV++PY+++     DI  F+ Q     ++++ S  +          T I    G  +S   M    N  +        +   D  VS +   T  T     +P     +  +D VR I+   ++ ++   +++ G    I D++      FP ++ +   +V  + G++++S++ PLR V +   T+ + YG A  V+    FD      + +S  L W+  V+ F II+GL  DYDVFL +RI+E+R +  + + +++ G+   G++I+ AGIIMAVAFSGL  S+ L+LNQ AF+L  SVLLDTF+VR+ L+P ++   G   W+PR+
Sbjct:   52 FISNKWYSLIVIVVVICMIIPFCVFIKDFSWNENDNELIPPSSDSMVTRSYILNEYP-EGVIYPYELVITTKSDIDVFSTQYEKLTTNLMDSFTQYPDYFSNTSYTCINYFNGHSISGRAMKWLYNDDL-------YKWFFDKSVSPDKTTTRCTFIPLFNPIEQSSER-LDFVRGIINNVTQYNTDYNVYVRGFEVDISDSMVVCFKYFPIIVIVLFGIVLIITGISFQSLIVPLRVVFSTVTTVLWTYGFASFVFCNDYFDWTA-DIMAESSGLFWVVPVITFPIIIGLSSDYDVFLFSRIMEFRRKGLSTKLSVIVGVEKAGYLISYAGIIMAVAFSGLFLSNVLMLNQFAFILTFSVLLDTFVVRSLLLPAIVNILGELNWFPRK 430          
BLAST of EWM29469.1 vs. NCBI_GenBank
Match: gi|923139041|ref|XP_013762985.1| (MMPL domain-containing protein [Thecamonas trahens ATCC 50062] >gi|906552762|gb|KNC46005.1| MMPL domain-containing protein [Thecamonas trahens ATCC 50062])

HSP 1 Score: 182.956 bits (463), Expect = 2.145e-46
Identity = 124/389 (31.88%), Postives = 196/389 (50.39%), Query Frame = 0
Query:   33 LPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSE---DIFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAALNATVP--------TTRQFTLQTLRDTLVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILKGS---ESSSGL---TLHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWPRQRLPTP 404
            +P AVQ+KD+  + +   + P  + +        + +   G++ PY V+ +       + TPQ Y   +  L  ++  A PL+  D+T + ++ G EVS  E  A L+   P          R +  Q    +LV+S   A    +    DP   E + W+ +VR +L  S   +S  G     L++ G   V+ D +  +   FP +   T  V+F ++ + YRS+V P+R + TIAL +    GLAV ++Q G FD L    L QS  + WL  VM   I +GL LDY +F+++RI E R        ++  G+ + G +++ AG+IMAVAF  LL + EL+L    F+L  +VLLDT ++R  +VP  +  SG   WWP  R+P P
Sbjct:  495 VPFAVQVKDLHITADSTQVFPRDAPALKLFHAFQTLFP-PGLISPYHVLAVPPAHFGSVLTPQ-YFNFTATLTQVLTKAVPLK--DLTSLTMVNGVEVSLPEAAAYLSYKGPGGPGASDFAKRAYVYQANFGSLVNSAHSAATVKVLTPFDPLGEEAKPWLSSVRALLASSHELDSYRGTQYSALYVLGGNTVVIDTMDRIFKLFPYVALATAVVIFAIVAILYRSLVVPVRLLFTIALPIGATLGLAVMIFQKGNFDKLAESVLSQSKGIYWLVPVMSIPICMGLMLDYQIFILSRIAELRRAGFDHYSSVRLGVSSAGTVVSVAGVIMAVAFGSLLIAEELLLMCLGFILCFAVLLDTLLIRPVIVPAAVWLSGDINWWP-SRMPEP 878          
The following BLAST results are available for this feature:
BLAST of EWM29469.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112007|gb|EWM29469.1|0.000e+0100.00mmpl domain protein [Nannochloropsis gaditana][more]
gi|514698892|ref|XP_004997015.1|4.671e-8539.10hypothetical protein PTSG_11885 [Salpingoeca roset... [more]
gi|923136955|ref|XP_013761942.1|9.957e-6338.21MmpL efflux pump [Thecamonas trahens ATCC 50062] >... [more]
gi|553179410|ref|XP_005852698.1|1.726e-5879.56mmpl domain protein [Nannochloropsis gaditana CCMP... [more]
gi|569407331|gb|ETO23039.1|7.209e-5433.76MmpL efflux pump, partial [Reticulomyxa filosa][more]
gi|514689378|ref|XP_004992264.1|1.336e-5234.44hypothetical protein PTSG_06862 [Salpingoeca roset... [more]
gi|569384424|gb|ETO16373.1|8.846e-5244.68hypothetical protein RFI_20979 [Reticulomyxa filos... [more]
gi|294866928|ref|XP_002764888.1|1.284e-4931.55conserved hypothetical protein [Perkinsus marinus ... [more]
gi|471204793|ref|XP_004259185.1|2.104e-4730.08MmpL efflux pump, putative, partial [Entamoeba inv... [more]
gi|923139041|ref|XP_013762985.1|2.145e-4631.88MMPL domain-containing protein [Thecamonas trahens... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1209rna1209Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications