EWM29470.1, cds1206 (CDS) Nannochloropsis gaditana

Overview
NameEWM29470.1
Unique Namecds1206
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:54447..54600 -
Alignment locationCM002457.1:54113..54243 -
Alignment locationCM002457.1:53784..53947 -
Alignment locationCM002457.1:53526..53613 -
Alignment locationCM002457.1:53312..53407 -
Alignment locationCM002457.1:53019..53092 -
Alignment locationCM002457.1:52615..52784 -
Alignment locationCM002457.1:52331..52513 -
Alignment locationCM002457.1:52122..52203 -
Alignment locationCM002457.1:51875..51989 -
Alignment locationCM002457.1:51640..51738 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29470.1
ProductWD40-repeat-containing domain protein
Orig transcript idgnl|cribi|Naga_100449g3.9458.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:54447..54600 -
CM002457.1supercontigCM002457.1:54113..54243 -
CM002457.1supercontigCM002457.1:53784..53947 -
CM002457.1supercontigCM002457.1:53526..53613 -
CM002457.1supercontigCM002457.1:53312..53407 -
CM002457.1supercontigCM002457.1:53019..53092 -
CM002457.1supercontigCM002457.1:52615..52784 -
CM002457.1supercontigCM002457.1:52331..52513 -
CM002457.1supercontigCM002457.1:52122..52203 -
CM002457.1supercontigCM002457.1:51875..51989 -
CM002457.1supercontigCM002457.1:51640..51738 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|585112008|gb|EWM29470.1| (WD40-repeat-containing domain protein [Nannochloropsis gaditana])

HSP 1 Score: 928.317 bits (2398), Expect = 0.000e+0
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0
Query:    1 MAADTAQLHDRIATLEKEKIECLELIKTLHRKIHALEEENDLLAVENERLRAQEPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFNKHRPVDACVVHARKDHEKHAVIGRWSRCGRLYATGGHDKAVHLYDSNGGGALKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLWSS 451
            MAADTAQLHDRIATLEKEKIECLELIKTLHRKIHALEEENDLLAVENERLRAQEPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFNKHRPVDACVVHARKDHEKHAVIGRWSRCGRLYATGGHDKAVHLYDSNGGGALKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLWSS
Sbjct:    1 MAADTAQLHDRIATLEKEKIECLELIKTLHRKIHALEEENDLLAVENERLRAQEPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFNKHRPVDACVVHARKDHEKHAVIGRWSRCGRLYATGGHDKAVHLYDSNGGGALKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLWSS 451          
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|553185297|ref|XP_005854228.1| (hypothetical protein NGA_0207000, partial [Nannochloropsis gaditana CCMP526] >gi|422294829|gb|EKU22129.1| hypothetical protein NGA_0207000, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 917.916 bits (2371), Expect = 0.000e+0
Identity = 446/450 (99.11%), Postives = 448/450 (99.56%), Query Frame = 0
Query:    1 MAADTAQLHDRIATLEKEKIECLELIKTLHRKIHALEEENDLLAVENERLRAQEPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFNKHRPVDACVVHARKDHEKHAVIGRWSRCGRLYATGGHDKAVHLYDSNGGGALKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLWS 450
            MAADTAQLHDRIATLEKEKIECLELIKTLHRKIHALEEENDLLAVENERLRAQEPLSVVDGQSN+APETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFNKHRPVDACVVHARKDHEKHAVIGRWSRCGRLYATGGHDKAV+LYDSNGGG LKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGL ACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLWS
Sbjct:   27 MAADTAQLHDRIATLEKEKIECLELIKTLHRKIHALEEENDLLAVENERLRAQEPLSVVDGQSNIAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFNKHRPVDACVVHARKDHEKHAVIGRWSRCGRLYATGGHDKAVYLYDSNGGGPLKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLSACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLWS 476          
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|1173943680|gb|OQR92501.1| (hypothetical protein ACHHYP_03658 [Achlya hypogyna])

HSP 1 Score: 177.563 bits (449), Expect = 2.256e-47
Identity = 133/427 (31.15%), Postives = 211/427 (49.41%), Query Frame = 0
Query:   32 KIHALEEENDLLAVENERLRAQEPLSVVDGQSNVAPETGIGIFDLP---INTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFNKH--RPVDACVVHARKDHEKHAVIGRWSRCGRLYATGGHDKAVHLYDSNGG----GALKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLW 449
            +I+AL EEND+L+  NE+L  +      +  +  A ET +    +    I    L    GA +   E+A +E     LN + V    + +             +VA G VD+ + ++  ET     +++L     G P+L+L F    +    LL +CMDG H V+HF+     PV +   H R+ + +HA +G     G  + T   D+A HLY ++G        KS+YF G +EAL  V            P   G A+              +++A R+  +L YIDC + EK  +++N    + HVS+++L L VSP  ++LLAATD +R  +  +G N  LRS YGH+A  YS PR+ W  +  YV  +++   +L+ WS+ASER+V +   H  ++RD++      L AS  YD+ L++W
Sbjct:   29 RIYALNEENDVLSEANEQLMQENARLRNELDALKAVETSMAALSVAEPAIPEDLLTPGSGA-FTQLEVATIEQ-AHSLNMVSVSGHAYRAH------------IVASGAVDRCVKVHNWET-----KELLATFDAGAPVLALAFHPRQDVADYLLASCMDGRHFVLHFDGAALTPVQSFHDHNRQGNIRHAWLGE----GFGFITAASDRAAHLYTASGPTGPFAIAKSYYFNGTIEALTVV------------PATAGNAER-------------IVLAVRDDCYLHYIDCQTLEKTRLNMNTDGIE-HVSYTILDLRVSPSAKYLLAATDANRHFVVAVGSNVVLRSFYGHKAGPYSQPRIVWHASERYVVSNNEGDGQLLVWSVASERLVAQFVAHEKIIRDISTVGGVVLTAS--YDRALKVW 404          
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|1173958458|gb|OQS04813.1| (hypothetical protein THRCLA_02976 [Thraustotheca clavata])

HSP 1 Score: 172.17 bits (435), Expect = 1.623e-45
Identity = 140/446 (31.39%), Postives = 210/446 (47.09%), Query Frame = 0
Query:   19 KIECLELIKTLHRKIHALEEENDLLA-------VENERLRAQ-EPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFN--KHRPVDACVVHARKDHEKHAVIGRWSRCGRLYATGGHDKAVHLYDSNGGGAL---KSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLN-NALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLWS 450
            K E   ++     KI  LEEEND+LA        EN RLR++ E L  +D          + + +  +    L   DG    TQ+   V      +N L V            +  +  + ++A G VDK + +Y  +     S+++L     G P+L++ F    E    LLV+CMDG   V+  N  + + V A   H R+ + +H     W   G  +AT   DK  HLY S+        KS+YF G VEAL  V            P  T EA+              L++A R+  ++ Y+DC + EK  + LN NA    HVS++++ L VSP  ++LLAATD +R  ++++  N  LRS YGH A  YS PR  W  +  Y+  +++    +  WS+ASER+V + K H  L+RDM       L AS  YDK +++W+
Sbjct:    9 KAELSRVVAVSSEKILKLEEENDVLAEANELLMQENARLRSELEGLKALD-----VSMATLTVSEPTVPEDLLTPGDGV--FTQKEEAVISPAHSMNVLSV------------SGHVTRSNIIASGAVDKCVKVYDWK-----SKQLLDTFDAGAPVLAVSFHPQVEYADYLLVSCMDGHSYVLMLNGTELKLVQAFHDHTRQGNVRHI----WLSQGLAFATAASDKTAHLYRSSQQVNFTIAKSYYFNGTVEALTVV------------PAATTEAEQ-------------LVIAVRDDCYVHYVDCTTLEK--IRLNMNADGIEHVSYTIMDLRVSPSGKYLLAATDSNRHFIFQVKTNVVLRSFYGHTAGAYSQPRALWHTSEKYILSNNEGDGTIYIWSVASERLVHQFKAHDKLIRDMDLVHGVVLTAS--YDKAVKVWT 397          
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|953500688|emb|CEG38397.1| (WD40 repeat-containing protein [Plasmopara halstedii])

HSP 1 Score: 171.4 bits (433), Expect = 5.937e-45
Identity = 134/438 (30.59%), Postives = 208/438 (47.49%), Query Frame = 0
Query:   31 RKIHALEEENDLLAVENERLRAQEPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCV--RICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFNKHRPV----DACVVHARKDHEKHAVIG-RWSRCGRLYATGGHDKAVHLYD-SNGGG------ALKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTF----DPA-SCLLASIAYDKTLRLW 449
            ++I  L +EN++LA  N  L        ++ Q+  +P++    FD          C     +  EL  + G    ++PL     I +F +L  S +       +V  GG DK + ++  +T      + L +     P+L+L F    E     +   MD  H+V    +H         C  H   DH +       WS  G L+ TG  DK++++Y  S  GG       +KSFYF G VEA+ F                   A T G    +A     L+VA R+  ++ YIDC +FEK  V++N    + HVS++++ L +SP  +FLLAATD +R  ++ I  N  LR+ YGH+A  YS PR  W  +  Y+  ++++   +  WS+ASE+VV  L  H ALVRD+T      PA S +L +++YDK L++W
Sbjct:   30 KQIQNLIDENEMLAEANRLL--------LEKQAQNSPKSSEDAFDF---------CQ----VPDELL-LPGPALKIHPLIALENIHSFGNL-LSVSTHASRPEIVITGGADKSICVHDWKTG-----QRLCMVETSAPVLALAFNPKPELADYFVAAGMDAKHAVYKLEQHEEQWIVRLVCEFH---DHNRQGAFKLAWSASGLLFGTGSSDKSLNIYQCSQLGGPGEYVEKIKSFYFNGTVEAMVF-------------------APTIGLESNVADVHELLVVAVRDDCYVHYIDCSTFEKERVNMNPDGIE-HVSYTIMDLNLSPSGKFLLAATDSNRNFIFTIKQNVILRNFYGHKAGPYSQPRAVWHPSEKYIISNTEDNGSIYVWSIASEQVVETLDAHEALVRDLTCPAPGSPATSAMLVTVSYDKRLKVW 416          
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|669142112|ref|XP_008606618.1| (hypothetical protein SDRG_02794 [Saprolegnia diclina VS20] >gi|530741902|gb|EQC40144.1| hypothetical protein SDRG_02794 [Saprolegnia diclina VS20])

HSP 1 Score: 169.088 bits (427), Expect = 3.590e-44
Identity = 144/456 (31.58%), Postives = 217/456 (47.59%), Query Frame = 0
Query:    1 MAADTAQLHDRIATLEKEKIECLELIKTLHRKIHALEEENDLLAVENERLRAQ-EPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFN--KHRPVDACVVHARKDHEKHAVIGRWSRCGRLYATGGHDKAVHLYDSNGGGAL----KSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLW 449
            +AA+ A +   +A ++    E    I  L+ +   L E N+LL  EN RLRA+ + L  +  +S++A   G+ I + P+    L       Y   ELA +E           +  T   L  S     P   +VA G VD+      V+ +   S+ +L     G P+L+L F         LL  CMDG   V+  N  +   V A   H R+ + +HA    W   G  + T   DK  HLY  +   +     KS+YF G VEALA V            P  T  A+      LIA       +A R+  +L Y+DC + EK  +++N    + HVS+++L L  SP  ++LLAATD +R  ++ +  N  LRS YGH+A  YS PRV W  +  Y+  +++    L  WS+ASER++ +   H  L+RDM  D A  +L +++YDK L++W
Sbjct:    8 LAAELAAVQQELAQVQSSTSE---RIYKLNEENDVLAEANELLTQENARLRAELDALKAL--ESSMA---GLAIAE-PVVPEDLLTPGSGLYPQTELACIE-----------QAHTLNELSVSGHVLRPH--IVASGAVDRC-----VKVHDYASKALLATFDAGAPVLALAFHPQPAYADYLLANCMDGRTFVLKLNGDELTLVQAFHNHTRQGNVRHA----WLSTGLAFVTAASDKTAHLYRLDDATSTFLIAKSYYFNGTVEALAVV------------PASTTHAE------LIA-------LAVRDDCYLHYVDCATLEKTRLNMNTDGIE-HVSYTILDLRTSPSGKYLLAATDANRHFVFEVLQNVVLRSFYGHKAGPYSQPRVLWHASEKYIVSNNEGDGVLNVWSVASERLLTQFTAHEKLIRDM--DMAQGVLLTVSYDKALKVW 404          
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|301111420|ref|XP_002904789.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262095119|gb|EEY53171.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 168.318 bits (425), Expect = 9.898e-44
Identity = 139/460 (30.22%), Postives = 216/460 (46.96%), Query Frame = 0
Query:   17 KEKIECLE-----LIKTLHRKIHALEEENDLLAVENERL---RAQEPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHFNKHRPVDA----CVVHARKDHEKHAVIG-RWSRCGRLYATGGHDKAVHLYDS---NGGG----ALKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMT----FDPA-SCLLASIAYDKTLRLWSS 451
            KE ++ L+     L  T  +KI  L +E +LLA  N  L   +AQ P +     S  AP     +  +P          G     + L  ++ V    N L V          SA    P+ V+   GG DK + ++  ++     +K+ V+     P+L+L F    E     L   MD  H++     H    +    C +H   DH +H      WS  G L+ATG  DK++++Y     NG G      KSFYF G VEA+AF             P E+   +              L+VA R+  ++ Y+DC +FEK  +++N    + HVS++++ L++SP  ++LLA+TD +R  ++ I  N  LRS YGH+A  YS PR  W  +  YV  +++E   +  WS+ASE+VV     H ALVRD+       P+ S +L +++YDK +++W S
Sbjct:   11 KETLQALQARYDRLDATTTKKIQDLTDEIELLAEANRLLFEKQAQNPPT----SSKDAP----SLLQVPDELL----LPGPSLTIRPLVTLDNVHSFGNLLSV----------SAHATRPEIVIT--GGADKCVCVHDWKSG----QKLCVVET-SAPVLALAFNPKSELADYFLAAGMDAKHALYRLEHHEEQWSVRLVCELH---DHSRHGAFKLAWSANGLLFATGSSDKSLNIYKCSQLNGDGEQVEKFKSFYFNGTVEAIAFT------------PSESENNE-------------LLVVAVRDDCYVHYVDCSTFEKERINMNPDGIE-HVSYTIMDLSLSPSGKYLLASTDSNRNFIFSIKRNVALRSFYGHKAGPYSQPRAVWHPSEKYVISNNEENGTVFVWSIASEQVVESFDAHDALVRDLVCPTPLSPSGSPMLVTVSYDKRMKIWES 412          
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|568004578|gb|ETL78897.1| (hypothetical protein L917_20366 [Phytophthora parasitica])

HSP 1 Score: 166.777 bits (421), Expect = 2.698e-43
Identity = 139/471 (29.51%), Postives = 219/471 (46.50%), Query Frame = 0
Query:    1 MAADTAQLHDRIATLEKEKIECLELIKTLHRKIHALEEENDLLAVENERL---RAQEPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHF----NKHRPVDACVVHARKDHEKHAVIG-RWSRCGRLYATGGHDKAVHLYDS---NGGG----ALKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDM-----TFDPASCLLASIAYDKTLRLWSS 451
            + A+ A+L + +  L+K + + L+   T  ++I  L +EN+LLA  N  L   +AQ P        +   +  + +  +P          G     ++L  ++ V    N L V          SA    P+ V+   GG DK + ++  +T      + L       P+L+L F    E     +   MD  H++        + R    C  H   DH +H      WS  G  +ATG  DK++++Y     +G G     +KSFYF G VEA+AF     SG        E+ E                L+VA R+  ++ YIDC +FEK  V++N    + HVS++++ L++SP  ++LLAATD +R  ++ I  N  LRS YGH+A  YS PR  W  +  YV  +++E   +  WS+ASE+VV     H ALVRD+          S  L +++YDK +++W S
Sbjct:    3 LEAENARLKEALQALQK-RYDRLDASTT--KQIQDLTDENELLAEANRLLLEKQAQNP--------STPSKDALSLLQVPDELL----LPGPALSIRQLVALDNVHSFGNLLSV----------SAHATRPEIVIT--GGADKCVCVHDWKTG-----QKLCAVETSAPVLALAFNPKREFAEYFVAAGMDAKHALYRLEQLEKQWRVRTVCEFH---DHNRHGAFKIAWSASGLFFATGSSDKSLNMYQCSHLDGDGEQVEKIKSFYFNGTVEAMAFA---PSGS-------ESSE---------------LLVVAVRDDCYVHYIDCSTFEKERVNMNPDGIE-HVSYTIMDLSLSPSGKYLLAATDSNRNFIFAIKRNAALRSFYGHKAGPYSQPRAVWHPSEKYVISNNEENGTIFVWSIASEQVVETFDAHDALVRDLVCPITVSSSGSPTLVTVSYDKRMKVWES 412          
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|567975120|gb|ETL25689.1| (hypothetical protein L916_20493 [Phytophthora parasitica])

HSP 1 Score: 166.777 bits (421), Expect = 3.217e-43
Identity = 139/471 (29.51%), Postives = 219/471 (46.50%), Query Frame = 0
Query:    1 MAADTAQLHDRIATLEKEKIECLELIKTLHRKIHALEEENDLLAVENERL---RAQEPLSVVDGQSNVAPETGIGIFDLPINTTYLEECDGAKYITQELAEVEGVGGGLNPLCVRICTFPSLPASAAPFIPDTVLVAVGGVDKFLTLYRVETNGSPSEKVLVLSGFGGPLLSLDFFAAGEEEGRLLVTCMDGSHSVVHF----NKHRPVDACVVHARKDHEKHAVIG-RWSRCGRLYATGGHDKAVHLYDS---NGGG----ALKSFYFLGNVEALAFVDRPASGCGKVLKPLETGEAQTRGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDM-----TFDPASCLLASIAYDKTLRLWSS 451
            + A+ A+L + +  L+K + + L+   T  ++I  L +EN+LLA  N  L   +AQ P        +   +  + +  +P          G     ++L  ++ V    N L V          SA    P+ V+   GG DK + ++  +T      + L       P+L+L F    E     +   MD  H++        + R    C  H   DH +H      WS  G  +ATG  DK++++Y     +G G     +KSFYF G VEA+AF     SG        E+ E                L+VA R+  ++ YIDC +FEK  V++N    + HVS++++ L++SP  ++LLAATD +R  ++ I  N  LRS YGH+A  YS PR  W  +  YV  +++E   +  WS+ASE+VV     H ALVRD+          S  L +++YDK +++W S
Sbjct:    3 LEAENARLKEALQALQK-RYDRLDASTT--KQIQDLTDENELLAEANRLLLEKQAQNP--------STPSKDALSLLQVPDELL----LPGPALSIRQLVALDNVHSFGNLLSV----------SAHATRPEIVIT--GGADKCVCVHDWKTG-----QKLCAVETSAPVLALAFNPKREFAEYFVAAGMDAKHALYRLEQLGKQWRVRTVCEFH---DHNRHGAFKIAWSASGLFFATGSSDKSLNMYQCSHLDGDGEQVEKIKSFYFNGTVEAMAFA---PSGS-------ESSE---------------LLVVAVRDDCYVHYIDCSTFEKERVNMNPDGIE-HVSYTIMDLSLSPSGKYLLAATDSNRNFIFAIKRNAALRSFYGHKAGPYSQPRAVWHPSEKYVISNNEENGTIFVWSIASEQVVETFDAHDALVRDLVCPITVSSSGSPTLVTVSYDKRMKVWES 412          
BLAST of EWM29470.1 vs. NCBI_GenBank
Match: gi|298715454|emb|CBJ34046.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 159.844 bits (403), Expect = 3.911e-43
Identity = 77/164 (46.95%), Postives = 115/164 (70.12%), Query Frame = 0
Query:  286 RGEGGLIACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLW 449
            +GEGG +      L+V++R   HLTY++ ++ ++  VSLN   WDTHVSF+V+S+A S   ++LLAATDKSR IL+R G N ++R+L GH  D+Y  PRV WD +G + YC+S   +++    LAS RVV +LKGHRA++RD+  DP+  +L + +YDKT+++W
Sbjct:   29 KGEGGALE-----LVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGSNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPSRRVLVTASYDKTVKVW 187          
The following BLAST results are available for this feature:
BLAST of EWM29470.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112008|gb|EWM29470.1|0.000e+0100.00WD40-repeat-containing domain protein [Nannochloro... [more]
gi|553185297|ref|XP_005854228.1|0.000e+099.11hypothetical protein NGA_0207000, partial [Nannoch... [more]
gi|1173943680|gb|OQR92501.1|2.256e-4731.15hypothetical protein ACHHYP_03658 [Achlya hypogyna... [more]
gi|1173958458|gb|OQS04813.1|1.623e-4531.39hypothetical protein THRCLA_02976 [Thraustotheca c... [more]
gi|953500688|emb|CEG38397.1|5.937e-4530.59WD40 repeat-containing protein [Plasmopara halsted... [more]
gi|669142112|ref|XP_008606618.1|3.590e-4431.58hypothetical protein SDRG_02794 [Saprolegnia dicli... [more]
gi|301111420|ref|XP_002904789.1|9.898e-4430.22conserved hypothetical protein [Phytophthora infes... [more]
gi|568004578|gb|ETL78897.1|2.698e-4329.51hypothetical protein L917_20366 [Phytophthora para... [more]
gi|567975120|gb|ETL25689.1|3.217e-4329.51hypothetical protein L916_20493 [Phytophthora para... [more]
gi|298715454|emb|CBJ34046.1|3.911e-4346.95conserved unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1207rna1207Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications