EWM29465.1, cds1205 (CDS) Nannochloropsis gaditana

Overview
NameEWM29465.1
Unique Namecds1205
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:51085..51360 +
Alignment locationCM002457.1:51413..51532 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29465.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100449g4.9453.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:51085..51360 +
CM002457.1supercontigCM002457.1:51413..51532 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29465.1 vs. NCBI_GenBank
Match: gi|585112003|gb|EWM29465.1| (hypothetical protein Naga_100449g4 [Nannochloropsis gaditana])

HSP 1 Score: 275.789 bits (704), Expect = 5.878e-94
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 
Query:    1 MKARKEGHHASNCSVLAASSPVLPQLEYVTLPVLYHYFLEVLQISNEHSRNEGITHLYTWHFSDAVSLGPKGTYTSKAVNPNAFFDELPLGSCWLRQNIVLASSLRADWRTSEFCSDLHTVEPRNQDIATQ 131
            MKARKEGHHASNCSVLAASSPVLPQLEYVTLPVLYHYFLEVLQISNEHSRNEGITHLYTWHFSDAVSLGPKGTYTSKAVNPNAFFDELPLGSCWLRQNIVLASSLRADWRTSEFCSDLHTVEPRNQDIATQ
Sbjct:    1 MKARKEGHHASNCSVLAASSPVLPQLEYVTLPVLYHYFLEVLQISNEHSRNEGITHLYTWHFSDAVSLGPKGTYTSKAVNPNAFFDELPLGSCWLRQNIVLASSLRADWRTSEFCSDLHTVEPRNQDIATQ 131
The following BLAST results are available for this feature:
BLAST of EWM29465.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112003|gb|EWM29465.1|5.878e-94100.00hypothetical protein Naga_100449g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1206rna1206Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications