EWM29472.1, cds1202 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29472.1 vs. NCBI_GenBank
Match: gi|585112011|gb|EWM29472.1| (hypothetical protein Naga_100714g2 [Nannochloropsis gaditana]) HSP 1 Score: 468.774 bits (1205), Expect = 3.784e-167 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query: 1 MRTVCLFIASLGFASAFLAPVPSFTPTRIRTTQTSMMLSPEDIATGTSNLLAIVKENDVFVKNAGDYPWGSVQAPGWALPVAAIATLSFGVIIPLVLKPGVDAFNTGGAKGAEKIASSTKASSRPGAKPAAGKAGKRVMAKGGVPKKNDRDFLGARNVAVGMPGIPGQKRSEEKFGSWCVQAAERKSHTLCLLTFDKRRATFRKYYDEKKLSQRDRFMMENFSWLLLH 228
MRTVCLFIASLGFASAFLAPVPSFTPTRIRTTQTSMMLSPEDIATGTSNLLAIVKENDVFVKNAGDYPWGSVQAPGWALPVAAIATLSFGVIIPLVLKPGVDAFNTGGAKGAEKIASSTKASSRPGAKPAAGKAGKRVMAKGGVPKKNDRDFLGARNVAVGMPGIPGQKRSEEKFGSWCVQAAERKSHTLCLLTFDKRRATFRKYYDEKKLSQRDRFMMENFSWLLLH
Sbjct: 1 MRTVCLFIASLGFASAFLAPVPSFTPTRIRTTQTSMMLSPEDIATGTSNLLAIVKENDVFVKNAGDYPWGSVQAPGWALPVAAIATLSFGVIIPLVLKPGVDAFNTGGAKGAEKIASSTKASSRPGAKPAAGKAGKRVMAKGGVPKKNDRDFLGARNVAVGMPGIPGQKRSEEKFGSWCVQAAERKSHTLCLLTFDKRRATFRKYYDEKKLSQRDRFMMENFSWLLLH 228
BLAST of EWM29472.1 vs. NCBI_GenBank
Match: gi|553185303|ref|XP_005854230.1| (hypothetical protein NGA_0207200 [Nannochloropsis gaditana CCMP526] >gi|422294831|gb|EKU22131.1| hypothetical protein NGA_0207200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 204.527 bits (519), Expect = 1.683e-64 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query: 1 MRTVCLFIASLGFASAFLAPVPSFTPTRIRTTQTSMMLSPEDIATGTSNLLAIVKENDVFVKNAGDYPWGSVQAPGWALPVAAIATLSFGVIIPLVLKPGV 101
MRTVCLFIASLGFASAFLAPVPSFTPTRIRTTQTSMMLSPEDIATGTSNLLAIVKENDVFVKNAGDYPWGSVQAPGWALPVAAIATLSFGVIIPLVLKPGV
Sbjct: 1 MRTVCLFIASLGFASAFLAPVPSFTPTRIRTTQTSMMLSPEDIATGTSNLLAIVKENDVFVKNAGDYPWGSVQAPGWALPVAAIATLSFGVIIPLVLKPGV 101
BLAST of EWM29472.1 vs. NCBI_GenBank
Match: gi|585101549|gb|EWM21362.1| (hypothetical protein Naga_100666g1 [Nannochloropsis gaditana]) HSP 1 Score: 60.077 bits (144), Expect = 4.144e-8 Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 0
Query: 5 CLFIASLGFASAFLAPVPSFTPTRIRTTQTSMMLSPEDIATGTSNLLAIVKENDVFVKNAG---DYPWGSVQAPGWALPVAAIATLSFGVIIPLVLKPGVDAFN 105
CL IA L + ++P +F P + T + ++ A T++L A +DV V A +Y +G+V APGW LPV A+ TL V IPL L+PG +AF
Sbjct: 7 CLSIAVL-YCMVLISPTLAFLPP-LSTASSKFRVASSHRAPRTTSLKA-ASFSDVCVSVAAAADEYEYGAVAAPGWVLPVGALLTLGLAVAIPLALRPGTEAFE 107 The following BLAST results are available for this feature:
BLAST of EWM29472.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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