EWM29475.1, cds1198 (CDS) Nannochloropsis gaditana

Overview
NameEWM29475.1
Unique Namecds1198
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:30472..30639 -
Alignment locationCM002457.1:30185..30362 -
Alignment locationCM002457.1:30014..30096 -
Alignment locationCM002457.1:29784..29886 -
Alignment locationCM002457.1:29511..29594 -
Alignment locationCM002457.1:29097..29221 -
Alignment locationCM002457.1:28817..28923 -
Alignment locationCM002457.1:28474..28618 -
Alignment locationCM002457.1:28170..28346 -
Alignment locationCM002457.1:27953..28018 -
Alignment locationCM002457.1:27780..27860 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29475.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100128g9.9397.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:30472..30639 -
CM002457.1supercontigCM002457.1:30185..30362 -
CM002457.1supercontigCM002457.1:30014..30096 -
CM002457.1supercontigCM002457.1:29784..29886 -
CM002457.1supercontigCM002457.1:29511..29594 -
CM002457.1supercontigCM002457.1:29097..29221 -
CM002457.1supercontigCM002457.1:28817..28923 -
CM002457.1supercontigCM002457.1:28474..28618 -
CM002457.1supercontigCM002457.1:28170..28346 -
CM002457.1supercontigCM002457.1:27953..28018 -
CM002457.1supercontigCM002457.1:27780..27860 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011040Sialidases
Homology
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585112016|gb|EWM29475.1| (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana])

HSP 1 Score: 917.146 bits (2369), Expect = 0.000e+0
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0
Query:    1 MESRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFVYQPYRRDYIRT 438
            MESRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFVYQPYRRDYIRT
Sbjct:    1 MESRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFVYQPYRRDYIRT 438          
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585101524|gb|EWM21339.1| (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana])

HSP 1 Score: 140.584 bits (353), Expect = 6.549e-33
Identity = 113/401 (28.18%), Postives = 185/401 (46.13%), Query Frame = 0
Query:   51 PHR---VYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYRE-ETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMR--------------QIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLG-GNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY-----GKGWDRRYKIVGATSIDIVKACGL-DDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLS---------IDFMKASLGDQYPSLQVYTCD 417
            PH+   VY+I   FP V YFS+  Y      +++L D  I PS GKNP+ + E TE+  GTYEIYV++DG+KG+PNE+  L  D T +  A  +  +  +D  +         E     WG VD P++   +     W  ++ CSD  + +    +               QIG       + ++  +   +     ++ R A+   +F  +  ++G  ++++ I G  P T  GLF+  R V +   Y +RY SF +AD     P+Y ++  +D+ N Y     G  WDR Y +V  + +++ K CGL +    + L         + P VPA++      RH+  G   +++  E V +N    N+C S             K  L + YP +Q++TCD
Sbjct:  152 PHKEEEVYRIRGKFPYVRYFSFTVYDASLQSISTLHDTDIRPSSGKNPFNDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALRPDST-SPYALLAFRLQLLDPRAGEDRSGKNRE-----WGYVDMPLVEILNHRNGEWDIIRRCSDEFQARTEEVIENLDLTFNTWWPKNLQIGTECNATEFSLFDPEQNPIIR-RGVAVRNANENYIFWCMPKEIGKKDYIIRITGKLPRTPYGLFDDIR-VADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDRMYNLVATSDVNLAKKCGLYNRAEDVLLQLTRSPTFTHLPHVPAIV-----MRHLLPGGGKERRGTEGV-ANVNLRNECESPTGKLLCDPARSAKVLLQEFYPLVQIWTCD 538          
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585107813|gb|EWM25941.1| (hypothetical protein Naga_100469g5 [Nannochloropsis gaditana])

HSP 1 Score: 125.561 bits (314), Expect = 1.306e-27
Identity = 123/472 (26.06%), Postives = 202/472 (42.80%), Query Frame = 0
Query:   15 YPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLR--GHPLTSLPDLRIDPSWGKNPYRE-ETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWG------GVDRPVISYTDDLGQ---TWKELQPCSDTT------------RYQFNRAMRQIGWTVY---------------DFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNV----QLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY------GKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFV--YQPYRRDY 435
            +P C W A    +     L+DPNAVY  QL+   +  +  YK+   FP+ +YFS++ Y+ +    P   + D  + P WG NP+   + T E  G YE+Y+T  G +G+ NE+R       NAT             ++ ++LR+Y   +P  + G       ++ P +    D+G+    W+ L  CS                 Q+  A    G  V                +  ++++   W  L     ++++  D P +   +N     +   N ++ I    P+ A GLF G R V NV +Y  RY S + AD F   PT +S+  + M+ FY         WD   +I  A +    +AC      A+FLP   E+ + +P     +  R +LA           +S    +  CG    C +  F+++ + +QYP L+VY CD   G K P V  Y+ Y +++
Sbjct:  123 WPHCYWHAKYAINYTHFGLIDPNAVYWGQLVR-GSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELR-----LPNAT-------------INQLILRMY---KPDPILGPSISIIDLEPPTLYMAHDMGEGKREWRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDW--LPPELAIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIR-VANVGDYEVRYLSMSTADGFY--PTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFWSDQAIFLPL--EVEDVHPAKSIVLFLRSILAH--------GPKSAGAASKACGNSALCGNPPFIRSIMQEQYPELEVYHCDSCEG-KPPLVTRYEDYFKNH 556          
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585102674|gb|EWM22223.1| (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana])

HSP 1 Score: 123.635 bits (309), Expect = 2.654e-27
Identity = 117/426 (27.46%), Postives = 186/426 (43.66%), Query Frame = 0
Query:   18 CAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRG-HPLTSLPDLRIDPSWGKNPYREETTEEG-AGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYT-TEQPPS---VWGGVDRPVISY-----TDDLGQTWKELQPCS-DTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGW----------DRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMG-LPSDKQSIEYVTSNC----GKENKCLSIDFMKASLGDQYPSLQVYTC 416
            CAW A+   + +     D  AVY    +     P  V +I   +P V YFSY++Y  +   P+ S+ D  I    G NP+    T  G  G Y+++VT +G++G+PNE+  ++   +NAT A              V+LR+Y   +Q P    +WG V  PV+ Y     +   G  W  L  C+ + T+     A + I      +  ++          C   + R+           VQ  GN V VI GT P +  GL+  P  V + T  + RY S +  D+ +PGP   +L   D+ +FY + +           R+YKIV A  +   K CG     A+FL    +       + PA++ RE+L++   +G   ++ QSI  +   C    G   KC +  F  + + + YP +  Y C
Sbjct:   44 CAWQASVGLN-FNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASG-SNATGA-------------FVLLRVYAYDKQSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTLDQCTPNNTKI----ASQFISTIATGYSRVLATENKAGANPCPTWNSRDQ----FLDGGGVQ--GNLVAVITGTLPPSPGGLWTPPF-VADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQTAR---VSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDC 440          
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|553186469|ref|XP_005854425.1| (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >gi|422294638|gb|EKU21938.1| hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 116.701 bits (291), Expect = 1.199e-24
Identity = 116/420 (27.62%), Postives = 176/420 (41.90%), Query Frame = 0
Query:   18 CAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRG-HPLTSLPDLRIDPSWGKNPYREETTEEG-AGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYT-TEQPPS---VWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGW----------DRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMG-LPSDKQSIEYVTSNC----GKENKCLSIDFMKASLGDQYPSLQVYTC 416
            CAW A+   + +     D  AVY    +     P  V +I   +P V YFSY++Y  +   P+ S+ D  I    G NP+    T  G  G Y+++VT +G++G+PNE+  ++   +NAT A              V+LR+Y   +Q P    +WG V  PV+ Y                     FN +  Q G              WY L                F    VQ  GN V VI GT P +  GL+  P  V + T  + RY S +  D+ +PGP   +L   D+ +FY + +           R+YKIV A  +   K CG     A+FL    +       + PA++ RE+L++   +G   ++ QSI  +   C    G   KC +  F  + + + YP +  Y C
Sbjct:  190 CAWQASVGLN-FNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASG-SNATGA-------------FVLLRVYAYDKQSPDKTDIWGAVAPPVVKYK-------------------LFNPSSGQGGL-------------WYTLDQ--------------FDGGGVQ--GNLVAVITGTLPPSPGGLWTPPF-VADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQTARV---SYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDC 542          
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|553192721|ref|XP_005855631.1| (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >gi|422293420|gb|EKU20720.1| hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 102.064 bits (253), Expect = 1.312e-19
Identity = 113/472 (23.94%), Postives = 202/472 (42.80%), Query Frame = 0
Query:    3 SRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPR--VVYFSYETYSLR-GHPLTSLPDLRI---DPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTE----------QPPS------VWGGVDRPVI------SYTDDLGQT-WKELQPCSDTTRYQFNRAMRQIGWTVY-----------DFRYLIYHSQ-------WYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY------GKGWDRRYKIVGATSIDIVKACGL-DDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKE---NKCLSIDFMKASLGDQYPSLQVYTCD 417
            S  +D A+ +     CAW A      Y     D  A+YQ  L+        ++++  SFP+  V YFS ++ ++  G P++++ D  I   DP   +NP+ E++ +   GTY I VT  G++G  NE+    E  T+    + + VM         ++R YT++           PP+      ++G    P++      S+TDD  +  W+    C  T   Q    + +  + +            +  +++Y  +       +  L + +LL    A    L P++  +     +  + GT P+T+  LF  P+ + N  +   RY SF++  +   GPT  +L       FY      G+ W+R Y  V A   D  + CGL +    LFL   + +++        +++R+++ +     LP   +S  Y    C      + C+  D++K  + D YP +Q YTCD
Sbjct:  119 SSASDQALRTPPQRNCAWQAYITGKQYNVAYPDLQAIYQ-VLVMLKTTEKNIFRVRGSFPQEGVRYFSLQSNNVDVGFPISTIKDYEIEVDDPENTRNPFAEDS-DRPIGTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVM---------LMRFYTSDPDRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPFAPPVRHNKNNNFVLYLGEDTATAGVYPNLDAAYLL----AVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPK-IANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAAE--DPERTCGLYNASQELFL---STVLDGKLQDYWGILDRQLIPKTQRTRLPD--RSNGYARLQCADASALDACVDPDYLKNVMEDYYPRIQWYTCD 567          
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|553195208|ref|XP_005856101.1| (hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >gi|422292936|gb|EKU20237.1| hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >gi|585107747|gb|EWM25879.1| hypothetical protein Naga_100054g15 [Nannochloropsis gaditana])

HSP 1 Score: 92.0485 bits (227), Expect = 3.498e-16
Identity = 94/395 (23.80%), Postives = 165/395 (41.77%), Query Frame = 0
Query:   54 VYKISASFPRVVYFSYETYSLRGHPLT---SLPDLRIDPSWGKNPYREETTEEGA-GTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLS--VVMLRLYTTEQPPS-VWGGVDRPVI---SYTDDLGQTWKELQPC---SDTTRYQF--NRAMRQIGWTVYDFRYLIYH----------SQWYRL-RSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDR-----RYKIVGATSIDIVKACGLDD-PHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTC 416
            V+     FP+   FSY TY++    ++    + D+ +  S G NP+       GA G+Y++YVT DG +G+PNE++  ++              D  + LS  +++ R+   +   S  WGGV  P +   +++      W  L PC   +D T   F  NR   + G +       +++          +Q+++     H++S     + AL P      G + + +I GT P  +                 +RY S +  +++ PG    S++ Q + NFY   WD+      Y I+ A +   +  CGL   P   +  Y     +    + P ++ REM+           +QS+E V   C  E  C +  F +  +GD YP +   +C
Sbjct:  218 VFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADG-------------DVTNELSGIIIVYRVIMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPCNPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIIS---CGNRALLPP-----GADMITIISGTLPPAS----------------DSRYASISLVNLYPPGRNVYSVSDQSLRNFY---WDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGY-------EQSLEQVRYACEAEKDCSNPKFFEQQMGDYYPRISYLSC 565          
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585108896|gb|EWM26805.1| (protein of unknown function DUF1214 [Nannochloropsis gaditana])

HSP 1 Score: 86.2705 bits (212), Expect = 2.553e-14
Identity = 106/461 (22.99%), Postives = 181/461 (39.26%), Query Frame = 0
Query:   18 CAWDATTDESIYTPLLLDPNAVYQPQLLSFAAH-PHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPY-REETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLY-------TTEQPPSVWGGVDRPVISYTDDLG-------QTWKELQPCSDTTRYQFNRAMRQI---GWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLG---------------GNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY---------GKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKN--ELMNNNPPAVP---AVIEREMLARHMAMGLPSD-----KQSIEYVTS-------NCGKE-NKCLSIDFMKAS-LGDQYPSLQVYTC 416
            CAW A+ D         D  +VY   L+ F    P  +  I   FP   YFS +TY     P+  L DL + PS G N + R+   +   G ++I +++DGN+G+PNE+  ++  + ++T   +            VM+R+Y       T     + WG  D P IS             Q WK++  C DT      +A+           +F+          ++   +L  RE    +  P VN   G                + + V+    P T    F+  R + +   Y  RY S +  D+  PGP   +    ++ +FY          +G+ R   +V A++   +  C +D   +L L   +  E  +  P + P   +++ RE++ +   +   +      K+   Y TS        CG+  + C    +  AS + + YP +  YTC
Sbjct:  222 CAWTASADYQTANLFFPDAQSVYH--LMVFPNFGPSDLAMIEGEFPDSRYFSVQTYDENFSPIAGLKDLEVVPSEGVNSFARKSPLQIRDGRFKIVLSKDGNRGFPNELP-INVGNFSSTTTGY------------VMMRMYGVDPLAKTNANKLAKWGYKDPPTISLRTAGSLTPTTWDQGWKKMPLCPDTNAEIITKAVTTAVNSRLIQMNFKEDSVSCSIENVKDGFMLMSRERASSSRAPFVNADGGYLMACANSRPEYIKNNDLIAVVNTFLPSTPYSKFKA-RFIGSPETYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQRNVSMVVASNQAALDRCKVDTSESLILTLDDLEEQASGEPTSPPEWWSIVYRELIPQSQIINGTNAASYGMKEQDIYKTSIQDAREIMCGENGDTCDRNPYRAASIMKEHYPRVSWYTC 666          
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|553191271|ref|XP_005855352.1| (hypothetical protein NGA_0119400, partial [Nannochloropsis gaditana CCMP526] >gi|422293709|gb|EKU21009.1| hypothetical protein NGA_0119400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 68.9366 bits (167), Expect = 1.294e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
Query:  143 MDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVI 174
            MDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVI
Sbjct:    1 MDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVI 32          
The following BLAST results are available for this feature:
BLAST of EWM29475.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 9
Match NameE-valueIdentityDescription
gi|585112016|gb|EWM29475.1|0.000e+0100.00hypothetical protein Naga_100128g9 [Nannochloropsi... [more]
gi|585101524|gb|EWM21339.1|6.549e-3328.18hypothetical protein Naga_100075g21 [Nannochlorops... [more]
gi|585107813|gb|EWM25941.1|1.306e-2726.06hypothetical protein Naga_100469g5 [Nannochloropsi... [more]
gi|585102674|gb|EWM22223.1|2.654e-2727.46hypothetical protein Naga_100312g6 [Nannochloropsi... [more]
gi|553186469|ref|XP_005854425.1|1.199e-2427.62hypothetical protein NGA_0235800 [Nannochloropsis ... [more]
gi|553192721|ref|XP_005855631.1|1.312e-1923.94hypothetical protein NGA_0673800 [Nannochloropsis ... [more]
gi|553195208|ref|XP_005856101.1|3.498e-1623.80hypothetical protein NGA_0332100 [Nannochloropsis ... [more]
gi|585108896|gb|EWM26805.1|2.553e-1422.99protein of unknown function DUF1214 [Nannochlorops... [more]
gi|553191271|ref|XP_005855352.1|1.294e-11100.00hypothetical protein NGA_0119400, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1199rna1199Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications