EWM29475.1, cds1198 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585112016|gb|EWM29475.1| (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana]) HSP 1 Score: 917.146 bits (2369), Expect = 0.000e+0 Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0 Query: 1 MESRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFVYQPYRRDYIRT 438 MESRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFVYQPYRRDYIRT Sbjct: 1 MESRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFVYQPYRRDYIRT 438
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585101524|gb|EWM21339.1| (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 140.584 bits (353), Expect = 6.549e-33 Identity = 113/401 (28.18%), Postives = 185/401 (46.13%), Query Frame = 0 Query: 51 PHR---VYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPYRE-ETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMR--------------QIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLG-GNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY-----GKGWDRRYKIVGATSIDIVKACGL-DDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLS---------IDFMKASLGDQYPSLQVYTCD 417 PH+ VY+I FP V YFS+ Y +++L D I PS GKNP+ + E TE+ GTYEIYV++DG+KG+PNE+ L D T + A + + +D + E WG VD P++ + W ++ CSD + + + QIG + ++ + + ++ R A+ +F + ++G ++++ I G P T GLF+ R V + Y +RY SF +AD P+Y ++ +D+ N Y G WDR Y +V + +++ K CGL + + L + P VPA++ RH+ G +++ E V +N N+C S K L + YP +Q++TCD Sbjct: 152 PHKEEEVYRIRGKFPYVRYFSFTVYDASLQSISTLHDTDIRPSSGKNPFNDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALRPDST-SPYALLAFRLQLLDPRAGEDRSGKNRE-----WGYVDMPLVEILNHRNGEWDIIRRCSDEFQARTEEVIENLDLTFNTWWPKNLQIGTECNATEFSLFDPEQNPIIR-RGVAVRNANENYIFWCMPKEIGKKDYIIRITGKLPRTPYGLFDDIR-VADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDRMYNLVATSDVNLAKKCGLYNRAEDVLLQLTRSPTFTHLPHVPAIV-----MRHLLPGGGKERRGTEGV-ANVNLRNECESPTGKLLCDPARSAKVLLQEFYPLVQIWTCD 538
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585107813|gb|EWM25941.1| (hypothetical protein Naga_100469g5 [Nannochloropsis gaditana]) HSP 1 Score: 125.561 bits (314), Expect = 1.306e-27 Identity = 123/472 (26.06%), Postives = 202/472 (42.80%), Query Frame = 0 Query: 15 YPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLR--GHPLTSLPDLRIDPSWGKNPYRE-ETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTEQPPSVWG------GVDRPVISYTDDLGQ---TWKELQPCSDTT------------RYQFNRAMRQIGWTVY---------------DFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNV----QLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY------GKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTCDVATGIKTPFV--YQPYRRDY 435 +P C W A + L+DPNAVY QL+ + + YK+ FP+ +YFS++ Y+ + P + D + P WG NP+ + T E G YE+Y+T G +G+ NE+R NAT ++ ++LR+Y +P + G ++ P + D+G+ W+ L CS Q+ A G V + ++++ W L ++++ D P + +N + N ++ I P+ A GLF G R V NV +Y RY S + AD F PT +S+ + M+ FY WD +I A + +AC A+FLP E+ + +P + R +LA +S + CG C + F+++ + +QYP L+VY CD G K P V Y+ Y +++ Sbjct: 123 WPHCYWHAKYAINYTHFGLIDPNAVYWGQLVR-GSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELR-----LPNAT-------------INQLILRMY---KPDPILGPSISIIDLEPPTLYMAHDMGEGKREWRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGRGVIPILREMNCPMNPTKGNVSFVLFQGDW--LPPELAIARQSQDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIR-VANVGDYEVRYLSMSTADGFY--PTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFWSDQAIFLPL--EVEDVHPAKSIVLFLRSILAH--------GPKSAGAASKACGNSALCGNPPFIRSIMQEQYPELEVYHCDSCEG-KPPLVTRYEDYFKNH 556
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585102674|gb|EWM22223.1| (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana]) HSP 1 Score: 123.635 bits (309), Expect = 2.654e-27 Identity = 117/426 (27.46%), Postives = 186/426 (43.66%), Query Frame = 0 Query: 18 CAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRG-HPLTSLPDLRIDPSWGKNPYREETTEEG-AGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYT-TEQPPS---VWGGVDRPVISY-----TDDLGQTWKELQPCS-DTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGW----------DRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMG-LPSDKQSIEYVTSNC----GKENKCLSIDFMKASLGDQYPSLQVYTC 416 CAW A+ + + D AVY + P V +I +P V YFSY++Y + P+ S+ D I G NP+ T G G Y+++VT +G++G+PNE+ ++ +NAT A V+LR+Y +Q P +WG V PV+ Y + G W L C+ + T+ A + I + ++ C + R+ VQ GN V VI GT P + GL+ P V + T + RY S + D+ +PGP +L D+ +FY + + R+YKIV A + K CG A+FL + + PA++ RE+L++ +G ++ QSI + C G KC + F + + + YP + Y C Sbjct: 44 CAWQASVGLN-FNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASG-SNATGA-------------FVLLRVYAYDKQSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTLDQCTPNNTKI----ASQFISTIATGYSRVLATENKAGANPCPTWNSRDQ----FLDGGGVQ--GNLVAVITGTLPPSPGGLWTPPF-VADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQTAR---VSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDC 440
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|553186469|ref|XP_005854425.1| (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >gi|422294638|gb|EKU21938.1| hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 116.701 bits (291), Expect = 1.199e-24 Identity = 116/420 (27.62%), Postives = 176/420 (41.90%), Query Frame = 0 Query: 18 CAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSLRG-HPLTSLPDLRIDPSWGKNPYREETTEEG-AGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYT-TEQPPS---VWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGW----------DRRYKIVGATSIDIVKACGLDDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMG-LPSDKQSIEYVTSNC----GKENKCLSIDFMKASLGDQYPSLQVYTC 416 CAW A+ + + D AVY + P V +I +P V YFSY++Y + P+ S+ D I G NP+ T G G Y+++VT +G++G+PNE+ ++ +NAT A V+LR+Y +Q P +WG V PV+ Y FN + Q G WY L F VQ GN V VI GT P + GL+ P V + T + RY S + D+ +PGP +L D+ +FY + + R+YKIV A + K CG A+FL + + PA++ RE+L++ +G ++ QSI + C G KC + F + + + YP + Y C Sbjct: 190 CAWQASVGLN-FNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASG-SNATGA-------------FVLLRVYAYDKQSPDKTDIWGAVAPPVVKYK-------------------LFNPSSGQGGL-------------WYTLDQ--------------FDGGGVQ--GNLVAVITGTLPPSPGGLWTPPF-VADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQTARV---SYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDC 542
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|553192721|ref|XP_005855631.1| (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >gi|422293420|gb|EKU20720.1| hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 102.064 bits (253), Expect = 1.312e-19 Identity = 113/472 (23.94%), Postives = 202/472 (42.80%), Query Frame = 0 Query: 3 SRYADLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPR--VVYFSYETYSLR-GHPLTSLPDLRI---DPSWGKNPYREETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLYTTE----------QPPS------VWGGVDRPVI------SYTDDLGQT-WKELQPCSDTTRYQFNRAMRQIGWTVY-----------DFRYLIYHSQ-------WYRLRSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY------GKGWDRRYKIVGATSIDIVKACGL-DDPHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKE---NKCLSIDFMKASLGDQYPSLQVYTCD 417 S +D A+ + CAW A Y D A+YQ L+ ++++ SFP+ V YFS ++ ++ G P++++ D I DP +NP+ E++ + GTY I VT G++G NE+ E T+ + + VM ++R YT++ PP+ ++G P++ S+TDD + W+ C T Q + + + + + +++Y + + L + +LL A L P++ + + + GT P+T+ LF P+ + N + RY SF++ + GPT +L FY G+ W+R Y V A D + CGL + LFL + +++ +++R+++ + LP +S Y C + C+ D++K + D YP +Q YTCD Sbjct: 119 SSASDQALRTPPQRNCAWQAYITGKQYNVAYPDLQAIYQ-VLVMLKTTEKNIFRVRGSFPQEGVRYFSLQSNNVDVGFPISTIKDYEIEVDDPENTRNPFAEDS-DRPIGTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVM---------LMRFYTSDPDRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFYGMIPPFAPPVRHNKNNNFVLYLGEDTATAGVYPNLDAAYLL----AVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPK-IANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAAE--DPERTCGLYNASQELFL---STVLDGKLQDYWGILDRQLIPKTQRTRLPD--RSNGYARLQCADASALDACVDPDYLKNVMEDYYPRIQWYTCD 567
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|553195208|ref|XP_005856101.1| (hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >gi|422292936|gb|EKU20237.1| hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >gi|585107747|gb|EWM25879.1| hypothetical protein Naga_100054g15 [Nannochloropsis gaditana]) HSP 1 Score: 92.0485 bits (227), Expect = 3.498e-16 Identity = 94/395 (23.80%), Postives = 165/395 (41.77%), Query Frame = 0 Query: 54 VYKISASFPRVVYFSYETYSLRGHPLT---SLPDLRIDPSWGKNPYREETTEEGA-GTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLS--VVMLRLYTTEQPPS-VWGGVDRPVI---SYTDDLGQTWKELQPC---SDTTRYQF--NRAMRQIGWTVYDFRYLIYH----------SQWYRL-RSCHLLSKREADHPALFPDVNVQLGGNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGKGWDR-----RYKIVGATSIDIVKACGLDD-PHALFLPYKNELMNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENKCLSIDFMKASLGDQYPSLQVYTC 416 V+ FP+ FSY TY++ ++ + D+ + S G NP+ GA G+Y++YVT DG +G+PNE++ ++ D + LS +++ R+ + S WGGV P + +++ W L PC +D T F NR + G + +++ +Q+++ H++S + AL P G + + +I GT P + +RY S + +++ PG S++ Q + NFY WD+ Y I+ A + + CGL P + Y + + P ++ REM+ +QS+E V C E C + F + +GD YP + +C Sbjct: 218 VFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADG-------------DVTNELSGIIIVYRVIMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPCNPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIIS---CGNRALLPP-----GADMITIISGTLPPAS----------------DSRYASISLVNLYPPGRNVYSVSDQSLRNFY---WDQGKSAVNYTIIMAKNKLALNKCGLSKLPANWYQVYWAGFADALEGSYPGIVYREMMTDGY-------EQSLEQVRYACEAEKDCSNPKFFEQQMGDYYPRISYLSC 565
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|585108896|gb|EWM26805.1| (protein of unknown function DUF1214 [Nannochloropsis gaditana]) HSP 1 Score: 86.2705 bits (212), Expect = 2.553e-14 Identity = 106/461 (22.99%), Postives = 181/461 (39.26%), Query Frame = 0 Query: 18 CAWDATTDESIYTPLLLDPNAVYQPQLLSFAAH-PHRVYKISASFPRVVYFSYETYSLRGHPLTSLPDLRIDPSWGKNPY-REETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLRLY-------TTEQPPSVWGGVDRPVISYTDDLG-------QTWKELQPCSDTTRYQFNRAMRQI---GWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPALFPDVNVQLG---------------GNFVMVIEGTAPLTATGLFEGPRPVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFY---------GKGWDRRYKIVGATSIDIVKACGLDDPHALFLPYKN--ELMNNNPPAVP---AVIEREMLARHMAMGLPSD-----KQSIEYVTS-------NCGKE-NKCLSIDFMKAS-LGDQYPSLQVYTC 416 CAW A+ D D +VY L+ F P + I FP YFS +TY P+ L DL + PS G N + R+ + G ++I +++DGN+G+PNE+ ++ + ++T + VM+R+Y T + WG D P IS Q WK++ C DT +A+ +F+ ++ +L RE + P VN G + + V+ P T F+ R + + Y RY S + D+ PGP + ++ +FY +G+ R +V A++ + C +D +L L + E + P + P +++ RE++ + + + K+ Y TS CG+ + C + AS + + YP + YTC Sbjct: 222 CAWTASADYQTANLFFPDAQSVYH--LMVFPNFGPSDLAMIEGEFPDSRYFSVQTYDENFSPIAGLKDLEVVPSEGVNSFARKSPLQIRDGRFKIVLSKDGNRGFPNELP-INVGNFSSTTTGY------------VMMRMYGVDPLAKTNANKLAKWGYKDPPTISLRTAGSLTPTTWDQGWKKMPLCPDTNAEIITKAVTTAVNSRLIQMNFKEDSVSCSIENVKDGFMLMSRERASSSRAPFVNADGGYLMACANSRPEYIKNNDLIAVVNTFLPSTPYSKFKA-RFIGSPETYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQRNVSMVVASNQAALDRCKVDTSESLILTLDDLEEQASGEPTSPPEWWSIVYRELIPQSQIINGTNAASYGMKEQDIYKTSIQDAREIMCGENGDTCDRNPYRAASIMKEHYPRVSWYTC 666
BLAST of EWM29475.1 vs. NCBI_GenBank
Match: gi|553191271|ref|XP_005855352.1| (hypothetical protein NGA_0119400, partial [Nannochloropsis gaditana CCMP526] >gi|422293709|gb|EKU21009.1| hypothetical protein NGA_0119400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.9366 bits (167), Expect = 1.294e-11 Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 Query: 143 MDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVI 174 MDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVI Sbjct: 1 MDFVDNLSVVMLRLYTTEQPPSVWGGVDRPVI 32 The following BLAST results are available for this feature:
BLAST of EWM29475.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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