EWM29480.1, cds1196 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|585112021|gb|EWM29480.1| (myb-related protein a [Nannochloropsis gaditana]) HSP 1 Score: 1384.78 bits (3583), Expect = 0.000e+0 Identity = 695/695 (100.00%), Postives = 695/695 (100.00%), Query Frame = 0
Query: 1 MDTAPTVTSLQLDSSTSSTLPSSSDLTLSSSSAFTTPPSLPMCTAVHPSIATTLSPSLSSSSAFLSSSTHSLSGGLSLPSTTADQLLPSLQSSTESLGGDSTTSSSSKTTSGKAKGAGGKKKEGGSQGNGRKPANAPVTIAHSRTGHTWTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPGPLGVGELSTILPSSSAPPSAPCTPSKTTATPTPTIPAPGAMPRPQAPPIVSFPFPSSPARPAMGPSTGAGSKRKTEGAKGEGGEARKKTCLSKSAAQEGQGGKKEGAAASKKQGGQGVSGKEGADAPIPSGPTFYSPTSMEAYFAFLNKFDPQQFLQLTQQQQQLLFSAQPSSGLSFGAGLPFLPQPTGAGTLHAPPAFLPTAPLPPATTNKTKGQTKKGTKEQEDTQHEQQDGQELASELQLFLGAPLSTDASHAPPPCFPPASSSSSAPSAAGSILPVTEADTQDYLSQLGLLQPKPAVSPSSSFLPPSSTPTLAVPDEKSRREAAAGAREGAHLRAKDVGIGSGSSLSIDMPGEPHGLASEAGQGPQVDDLFFAQGEAQVGKT 695
MDTAPTVTSLQLDSSTSSTLPSSSDLTLSSSSAFTTPPSLPMCTAVHPSIATTLSPSLSSSSAFLSSSTHSLSGGLSLPSTTADQLLPSLQSSTESLGGDSTTSSSSKTTSGKAKGAGGKKKEGGSQGNGRKPANAPVTIAHSRTGHTWTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPGPLGVGELSTILPSSSAPPSAPCTPSKTTATPTPTIPAPGAMPRPQAPPIVSFPFPSSPARPAMGPSTGAGSKRKTEGAKGEGGEARKKTCLSKSAAQEGQGGKKEGAAASKKQGGQGVSGKEGADAPIPSGPTFYSPTSMEAYFAFLNKFDPQQFLQLTQQQQQLLFSAQPSSGLSFGAGLPFLPQPTGAGTLHAPPAFLPTAPLPPATTNKTKGQTKKGTKEQEDTQHEQQDGQELASELQLFLGAPLSTDASHAPPPCFPPASSSSSAPSAAGSILPVTEADTQDYLSQLGLLQPKPAVSPSSSFLPPSSTPTLAVPDEKSRREAAAGAREGAHLRAKDVGIGSGSSLSIDMPGEPHGLASEAGQGPQVDDLFFAQGEAQVGKT
Sbjct: 1 MDTAPTVTSLQLDSSTSSTLPSSSDLTLSSSSAFTTPPSLPMCTAVHPSIATTLSPSLSSSSAFLSSSTHSLSGGLSLPSTTADQLLPSLQSSTESLGGDSTTSSSSKTTSGKAKGAGGKKKEGGSQGNGRKPANAPVTIAHSRTGHTWTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPGPLGVGELSTILPSSSAPPSAPCTPSKTTATPTPTIPAPGAMPRPQAPPIVSFPFPSSPARPAMGPSTGAGSKRKTEGAKGEGGEARKKTCLSKSAAQEGQGGKKEGAAASKKQGGQGVSGKEGADAPIPSGPTFYSPTSMEAYFAFLNKFDPQQFLQLTQQQQQLLFSAQPSSGLSFGAGLPFLPQPTGAGTLHAPPAFLPTAPLPPATTNKTKGQTKKGTKEQEDTQHEQQDGQELASELQLFLGAPLSTDASHAPPPCFPPASSSSSAPSAAGSILPVTEADTQDYLSQLGLLQPKPAVSPSSSFLPPSSTPTLAVPDEKSRREAAAGAREGAHLRAKDVGIGSGSSLSIDMPGEPHGLASEAGQGPQVDDLFFAQGEAQVGKT 695
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|553191263|ref|XP_005855350.1| (v-myb myeloblastosis viral oncogene-like protein [Nannochloropsis gaditana CCMP526] >gi|422293707|gb|EKU21007.1| v-myb myeloblastosis viral oncogene-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1080.47 bits (2793), Expect = 0.000e+0 Identity = 532/536 (99.25%), Postives = 533/536 (99.44%), Query Frame = 0
Query: 156 LLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPGPLGVGELSTILPSSSAPPSAPCTPSKTTATPTPTIPAPGAMPRPQAPPIVSFPFPSSPARPAMGPSTGAGSKRKTEGAKGEGGEARKKTCLSKSAAQEGQGGKKEGAAASKKQGGQGVSGKEGADAPIPSGPTFYSPTSMEAYFAFLNKFDPQQFLQLTQQQQQLLFSAQPSSGLSFGAGLPFLPQPTGAGTLHAPPAFLPTAPLPPATTNKTKGQTKKGTKEQEDTQHEQQDGQELASELQLFLGAPLSTDASHAPPPCFPPASSSSSAPSAAGSILPVTEADTQDYLSQLGLLQPKPAVSPSSSFLPPSSTPTLAVPDEKSRREAAAGAREGAHLRAKDVGIGSGSSLSIDMPGEPHGLASEAGQGPQVDDLFFAQGEAQ 691
+ EAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQ LVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPGPLGVGELSTILPSSSAPPSAPCTPSKTTATPTPTIPAPGAMPRPQAPPIVSFPFPSSPARPAMGPSTGAGSKRKTEGAKGEGGEARKKTCLSKSAAQEGQGGKKEGAAASKKQGGQGVSGKEGADAPIPSGPTFYSPTSMEAYFAFLNKFDPQQFLQLTQQQQQLLFSAQPSSGLSFGAGLPFLPQPTGAGTLHAPPAFLPTAPLPPATTNKTKGQTKKGTKEQEDTQHEQQDGQELASELQLFLGAPLSTDASHAPPPCFPPASSSSSAPSAAGSILPVTEADTQDYLSQLGLLQPKPAVSPSSSFLPPSSTPTLAVPDEKSRREAAAGAREGAHLRAKDVGIGSGSSLSIDMPGEPHGLASEAGQGPQVDDLFFAQGEAQ
Sbjct: 27 ICSEAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQQLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPGPLGVGELSTILPSSSAPPSAPCTPSKTTATPTPTIPAPGAMPRPQAPPIVSFPFPSSPARPAMGPSTGAGSKRKTEGAKGEGGEARKKTCLSKSAAQEGQGGKKEGAAASKKQGGQGVSGKEGADAPIPSGPTFYSPTSMEAYFAFLNKFDPQQFLQLTQQQQQLLFSAQPSSGLSFGAGLPFLPQPTGAGTLHAPPAFLPTAPLPPATTNKTKGQTKKGTKEQEDTQHEQQDGQELASELQLFLGAPLSTDASHAPPPCFPPASSSSSAPSAAGSILPVTEADTQDYLSQLGLLQPKPAVSPSSSFLPPSSTPTLAVPDEKSRREAAAGAREGAHLRAKDVGIGSGSSLSIDMPGEPHGLASEAGQGPQVDDLFFAQGEAQ 562
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|676393533|ref|XP_009040044.1| (hypothetical protein AURANDRAFT_5675, partial [Aureococcus anophagefferens] >gi|323449513|gb|EGB05401.1| hypothetical protein AURANDRAFT_5675, partial [Aureococcus anophagefferens]) HSP 1 Score: 192.586 bits (488), Expect = 3.492e-54 Identity = 92/160 (57.50%), Postives = 118/160 (73.75%), Query Frame = 0
Query: 149 WTSEQDDLLREAILRNGTDKWAAITEHMLP------FSFSSDECAVRWDEI-KDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRR 301
WT E+D +LRE +LR GT W ++ H+LP + EC RW+ + + VKGPW EED+LL+ LV ++GP K+W+++A HIPGRAGKQCRERWLNHLD V K +W EDA+L +AQ+R+GNKWSEIA+LLPGRAEN+VKNRFNSLIT+R
Sbjct: 1 WTEEEDAVLREGVLRFGTSAWEDVSRHLLPPVQGGPQKRQAPECEARWEAVVRHTAVKGPWLPEEDSLLRQLVNKFGP--KRWALIASHIPGRAGKQCRERWLNHLDTRVIKSDWTPDEDAVLLEAQQRVGNKWSEIARLLPGRAENAVKNRFNSLITKR 158
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|299471968|emb|CBN79647.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 209.149 bits (531), Expect = 3.804e-53 Identity = 94/156 (60.26%), Postives = 112/156 (71.79%), Query Frame = 0
Query: 146 GHTWTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRR 301
G W E D++LRE +LR G D W ++ HM P +E RW +K PVKGPWS EED+LL++LV YG KKWS++A PGR+GKQCRERWLNHLD VKK W ED LC+AQ RLGNKWSEI+KLLPGRAEN+VKNRFNS+IT+R
Sbjct: 80 GARWDREMDEMLREGVLRYGAD-WEEVSTHMAPHECPKEEVEKRWQMVKANPVKGPWSPEEDSLLKVLVDEYGR--KKWSLIATQFPGRSGKQCRERWLNHLDTRVKKSAWTGAEDMKLCEAQGRLGNKWSEISKLLPGRAENAVKNRFNSIITKR 232
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|855316683|ref|XP_012899258.1| (uncharacterized protein [Blastocystis hominis] >gi|300123939|emb|CBK25210.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 184.882 bits (468), Expect = 3.312e-47 Identity = 81/154 (52.60%), Postives = 112/154 (72.73%), Query Frame = 0
Query: 148 TWTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEI-KDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITR 300
WT E D+++REA+ R G++ W+ + + + + ++C +RW+++ +D VKGPWS EED LL+ LV ++GP KKWS +A HI GR GKQCRERWLNHL V K W E ED IL +AQ ++GNKWS I+KLLPGR+EN+VKNR+NS+ +R
Sbjct: 11 VWTRELDEMIREAVARYGSNDWSKVCQKLRTQQITPEQCQMRWEQVLRDQTVKGPWSEEEDKLLRSLVEKHGP--KKWSTIASHINGRIGKQCRERWLNHLSPDVSKDVWTEEEDEILINAQFQMGNKWSFISKLLPGRSENAVKNRYNSIASR 162
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|1032151703|gb|OAO15239.1| (transcriptional activator Myb [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 184.111 bits (466), Expect = 5.373e-47 Identity = 94/215 (43.72%), Postives = 128/215 (59.53%), Query Frame = 0
Query: 149 WTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEI-KDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPGPLGV-GELSTILPSSSAPPSAPCTPSKTTATPTPTIPAPGAMPRPQAPPIVSF 361
WT E D+++REA+ R G++ W + + + + ++C RW+ + +D VKGPWS EEDA+L+ LV ++GP KKWS +A +I GR GKQCRERWLNHL +V K W E ED IL +AQ ++GNKWS I+KLLPGR+EN+VKNR+NS+ +R + G G L PP A AP AMP + PP S+
Sbjct: 12 WTRELDEMIREAVARYGSNDWVKVCQKLRNQHITPEQCQERWETVLRDQTVKGPWSEEEDAILRSLVEKFGP--KKWSTIASYINGRIGKQCRERWLNHLSPTVTKDVWTEEEDEILINAQIQMGNKWSYISKLLPGRSENAVKNRYNSIASRNGVRKKRLGTFVTRGNSKANLLRLQVPPKASHV-------------APRAMPYVEHPPENSY 211
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|950894667|ref|XP_014528556.1| (acyl-coenzyme a:6-aminopenicillanic-acid-acyltransferase [Blastocystis sp. subtype 4] >gi|902863167|gb|KNB45113.1| acyl-coenzyme a:6-aminopenicillanic-acid-acyltransferase [Blastocystis sp. subtype 4]) HSP 1 Score: 184.496 bits (467), Expect = 2.008e-45 Identity = 90/201 (44.78%), Postives = 128/201 (63.68%), Query Frame = 0
Query: 148 TWTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEI-KDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPG------PLGVGELSTILPSSSAPPSAPCTPSKTTATPT 341
WT E D+++REA+ R G++ W + + + + ++C RW+ + +D VKGPWS EEDA+L+ LV ++GP KKWS +A +I GR GKQCRERWLNHL +V K W E ED IL +AQ ++GNKWS I+KLLPGR+EN+VKNR+NS+ +R + G P G G L + S A + + S+ +A+P
Sbjct: 5 NWTRELDEMIREAVARYGSNDWVKVCQKLRSQQITPEQCQARWENVLRDQTVKGPWSEEEDAILRSLVEKFGP--KKWSTIASYINGRIGKQCRERWLNHLSPAVSKDVWTEEEDEILINAQIQMGNKWSYISKLLPGRSENAVKNRYNSIASRNGVRKKRLGNFVNRSPAGRGNLLRLQIPSKARSNTQRSTSQESASPV 203
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|1121804789|ref|XP_019404322.1| (PREDICTED: myb-related protein A isoform X3 [Crocodylus porosus]) HSP 1 Score: 177.563 bits (449), Expect = 2.145e-43 Identity = 90/205 (43.90%), Postives = 127/205 (61.95%), Query Frame = 0
Query: 149 WTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKD-VPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPGPLGVGELSTILPSSSAPPSAPCTPSKTTATPTP-TIPAPGAMP 351
WT ++D+ L++ + +NGTD WA I H+ + S +C RW ++ + +KGPW+ EED + LV +YGP K+WS++A+H+ GR GKQCRERW NHL+ VKK W E ED I+ +A +RLGN+W+EIAKLLPGR +NS+KN +NS + R+ G L G + + PSSS PC + TP IP +P
Sbjct: 38 WTRDEDEKLKKLVEQNGTDDWAFIASHLQ--NRSDFQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGP--KRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQE---GYLQDG-IRSEQPSSSKLQHKPCVSVEHLQTPNQFYIPVQAHIP 234
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|557292743|ref|XP_006028882.1| (PREDICTED: myb-related protein A isoform X2 [Alligator sinensis]) HSP 1 Score: 177.563 bits (449), Expect = 2.187e-43 Identity = 90/205 (43.90%), Postives = 127/205 (61.95%), Query Frame = 0
Query: 149 WTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKD-VPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYGPGPLGVGELSTILPSSSAPPSAPCTPSKTTATPTP-TIPAPGAMP 351
WT ++D+ L++ + +NGTD WA I H+ + S +C RW ++ + +KGPW+ EED + LV +YGP K+WS++A+H+ GR GKQCRERW NHL+ VKK W E ED I+ +A +RLGN+W+EIAKLLPGR +NS+KN +NS + R+ G L G + + PSSS PC + TP IP +P
Sbjct: 38 WTRDEDEKLKKLVEQNGTDDWAFIASHLQ--NRSDFQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGP--KRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQE---GYLQDG-IRSERPSSSKLQHKPCISVEHLQTPNQFYIPVQAHIP 234
BLAST of EWM29480.1 vs. NCBI_GenBank
Match: gi|18655633|pdb|1H88|C (Chain C, Crystal Structure Of Ternary Protein-dna Complex1 >gi|18655638|pdb|1H89|C Chain C, Crystal Structure Of Ternary Protein-Dna Complex2) HSP 1 Score: 163.31 bits (412), Expect = 2.282e-43 Identity = 75/154 (48.70%), Postives = 108/154 (70.13%), Query Frame = 0
Query: 149 WTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVP-VKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRR 301
WT E+D+ L++ + +NGTD W I + LP + + +C RW ++ + +KGPW+ EED + LV +YGP K+WS++A+H+ GR GKQCRERW NHL+ VKK W E ED I+ A +RLGN+W+EIAKLLPGR +N++KN +NS + R+
Sbjct: 9 WTREEDEKLKKLVEQNGTDDWKVIANY-LP-NRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIKLVQKYGP--KRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 158 The following BLAST results are available for this feature:
BLAST of EWM29480.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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