EWM29476.1, cds1195 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|585112017|gb|EWM29476.1| (cop9 signalosome complex subunit 2 [Nannochloropsis gaditana]) HSP 1 Score: 1021.54 bits (2640), Expect = 0.000e+0 Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0 Query: 1 MDEDEKDMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSPSLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILDGKVGQGVRLLRAEERTTW 501 MDEDEKDMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSPSLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILDGKVGQGVRLLRAEERTTW Sbjct: 1 MDEDEKDMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSPSLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILDGKVGQGVRLLRAEERTTW 501
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|585112018|gb|EWM29477.1| (cop9 signalosome complex subunit 2 [Nannochloropsis gaditana]) HSP 1 Score: 857.825 bits (2215), Expect = 0.000e+0 Identity = 419/420 (99.76%), Postives = 419/420 (99.76%), Query Frame = 0 Query: 1 MDEDEKDMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSPSLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTH 420 MDEDEKDMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSPSLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILK H Sbjct: 1 MDEDEKDMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSPSLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKVH 420
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|553179429|ref|XP_005852701.1| (cop9 signalosome complex subunit 2 [Nannochloropsis gaditana CCMP526] >gi|553191278|ref|XP_005855354.1| cop9 signalosome complex subunit 2 [Nannochloropsis gaditana CCMP526] >gi|422293711|gb|EKU21011.1| cop9 signalosome complex subunit 2 [Nannochloropsis gaditana CCMP526] >gi|422295832|gb|EKU23131.1| cop9 signalosome complex subunit 2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 608.986 bits (1569), Expect = 0.000e+0 Identity = 341/501 (68.06%), Postives = 344/501 (68.66%), Query Frame = 0 Query: 15 FEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSPSLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILK--------------------------THRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILDGKVGQG 489 FEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPAS H ARAAVTQ R + T L KLGHLLLSEAMQKEG EESVRLLGRLQRLIKDLLKSCEGP EGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITW DYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILK THRQALT+DTFVRA+IDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILDGK Q Sbjct: 15 FEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASSHSARAAVTQ-----------------------RLWFKTNL--------------------------------KLGHLLLSEAMQKEG-------------------------------------------EESVRLLGRLQRLIKDLLKSCEGPLEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITW-----------------------DYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKVLVCLLLYALLPPCPRPLISPLSSLQTHRQALTRDTFVRAHIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILDGKTRQA 394
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|357131345|ref|XP_003567299.1| (PREDICTED: COP9 signalosome complex subunit 2 [Brachypodium distachyon] >gi|721633973|ref|XP_010230789.1| PREDICTED: COP9 signalosome complex subunit 2 [Brachypodium distachyon] >gi|721633976|ref|XP_010230790.1| PREDICTED: COP9 signalosome complex subunit 2 [Brachypodium distachyon] >gi|944068460|gb|KQK03944.1| hypothetical protein BRADI_2g10780 [Brachypodium distachyon] >gi|944068461|gb|KQK03945.1| hypothetical protein BRADI_2g10780 [Brachypodium distachyon] >gi|944068462|gb|KQK03946.1| hypothetical protein BRADI_2g10780 [Brachypodium distachyon]) HSP 1 Score: 370.163 bits (949), Expect = 9.401e-121 Identity = 210/499 (42.08%), Postives = 299/499 (59.92%), Query Frame = 0 Query: 7 DMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSP--SLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILD----GKVGQGVRLLRAEERT 499 D + E+Y FEYSD+E EE DV +EN YY +KG+ + D GA+ G V+R+E E+GEWGFKALKQ+VK+ + LG+Y+ M++ Y +L + ++AVT+N +EK +++++D VS S+S SLL+ Y TTL LE +N+RLWFKTNLKL + + GE+ GR+ +++K+L KSC+ EDGS D K+GTQLLEVYA+++Q++ K+++KLK+LY+ AL I +PHPR +G+++ECGG+M+M E+ + A FF +FK YDEAG+PRR LKYLVLA+ML S ++PFD QEAKPYK + E++AM NLI A+Q +D+ FE ILKT+R+ + D F+R I+ LL IRTQV+ KL+ PYTR+ + I++ELN PE+DVE LLVSLILD G + Q +LL +R+ Sbjct: 2 DADMEDYGFEYSDDEPEEQDVDIENQYYNSKGM-VETDAEGALAGFDAVVRMEP--EKGEWGFKALKQTVKIYYKLGKYKEMMDAYREMLTY----------IKSAVTRNYSEKCINNIMDFVSGSASQNFSLLQEFYQTTLKALEEA---------------KNERLWFKTNLKLCKIWF------DMGEY-----------------------------------------------GRMSKILKELHKSCQK------EDGS---DDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKTNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELN-FPEKDVEQLLVSLILDNRVQGHIDQVNKLLECGDRS 409
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|670429189|ref|XP_008655477.1| (COP9 signalosome complex subunit 2 isoform X2 [Zea mays] >gi|1142831157|gb|AQK89243.1| COP9 signalosome complex subunit 2 [Zea mays]) HSP 1 Score: 369.007 bits (946), Expect = 2.361e-120 Identity = 210/499 (42.08%), Postives = 299/499 (59.92%), Query Frame = 0 Query: 7 DMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSP--SLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILD----GKVGQGVRLLRAEERT 499 D + E+Y FEYSDEE EE DV +EN YY +KGL + D GA+ G +V+ +E E+ EWGFKALKQ+VK+ + LG+Y+ M++ Y +L + ++AVT+N +EK +++++D VS S+S SLL+ Y TTL LE +N+RLWFKTNLKL + + GE+ GR+ +++K+L KSC+ EDGS D K+GTQLLEVYA+++Q++ K+++KLK+LY+ AL I +PHPR +G+++ECGG+M+M E+ ++ A FF +FK YDEAG+PRR LKYLVLA+ML S ++PFD QEAKPYK + E++AM NLI A+Q +D+ FE ILK++R+ + D F+R I+ LL IRTQV+ KL+ PYTR+ + I++ELN PE+DVE LLVSLILD G + Q +LL ER+ Sbjct: 4 DADMEDYGFEYSDEEPEEQDVDIENQYYNSKGL-VETDPEGALAGFDQVVSMEP--EKAEWGFKALKQTVKLYYKLGKYKEMMDAYREMLTY----------IKSAVTRNYSEKCINNIMDFVSGSASQNFSLLQEFYQTTLKALEEA---------------KNERLWFKTNLKLCKIWF------DMGEY-----------------------------------------------GRMSKILKELHKSCQR------EDGS---DDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWDEAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDSEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELN-FPEKDVEQLLVSLILDNRIQGHIDQVNKLLERGERS 411
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|242057017|ref|XP_002457654.1| (COP9 signalosome complex subunit 2 [Sorghum bicolor] >gi|241929629|gb|EES02774.1| hypothetical protein SORBI_3003G132000 [Sorghum bicolor]) HSP 1 Score: 367.466 bits (942), Expect = 1.252e-119 Identity = 210/499 (42.08%), Postives = 298/499 (59.72%), Query Frame = 0 Query: 7 DMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSP--SLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILD----GKVGQGVRLLRAEERT 499 D + E+Y FEYSDEE EE DV +EN YY +KGL + D GA+ G +V+ +E E+ EWGFKALKQ+VK+ + LG+Y+ M++ Y +L + ++AVT+N +EK +++++D VS S+S SLL+ Y TTL LE +N+RLWFKTNLKL + + GE+ GR+ +++K+L KSC+ EDGS D K+GTQLLEVYA+++Q++ K+++KLK+LY+ AL I +PHPR +G+++ECGG+M+M E+ + A FF +FK YDEAG+PRR LKYLVLA+ML S ++PFD QEAKPYK + E++AM NLI A+Q +D+ FE ILK++R+ + D F+R I+ LL IRTQV+ KL+ PYTR+ + I++ELN PE+DVE LLVSLILD G + Q +LL ER+ Sbjct: 4 DADMEDYGFEYSDEEPEEQDVDIENQYYNSKGL-VETDPEGALAGFDQVVTMEP--EKAEWGFKALKQTVKLYYKLGKYKEMMDAYREMLTY----------IKSAVTRNYSEKCINNIMDFVSGSASQNFSLLQEFYQTTLKALEEA---------------KNERLWFKTNLKLCKIWF------DMGEY-----------------------------------------------GRMSKILKELHKSCQR------EDGS---DDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELN-FPEKDVEQLLVSLILDNRIQGHIDQVNKLLERGERS 411
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|1070889336|gb|OEL14181.1| (COP9 signalosome complex subunit 2, partial [Dichanthelium oligosanthes]) HSP 1 Score: 366.696 bits (940), Expect = 1.996e-119 Identity = 208/499 (41.68%), Postives = 299/499 (59.92%), Query Frame = 0 Query: 7 DMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSP--SLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILD----GKVGQGVRLLRAEERT 499 D + E+Y FEYSDEE EE DV +EN YY +KG+ + D GA+ G +V+++E E+ EWGFKALKQ+VK+ + LG+Y+ M++ Y +L + ++AVT+N +EK +++++D VS S+S SLL+ Y TTL LE +N+RLWFKTNLKL + + GE+ GR+ +++K+L KSC+ EDGS D K+GTQLLEVYA+++Q++ K+++KLK+LY+ AL I +PHPR +G+++ECGG+M+M E+ + A FF +FK YDEAG+PRR LKYLVLA+ML S ++PFD QEAKPYK + E++AM NLI A+Q +D+ FE ILK++R+ + D F+R I+ LL IRTQV+ KL+ PYTR+ + I++ELN PE+DVE LLVSLILD G + Q +LL +R+ Sbjct: 1 DADMEDYGFEYSDEEPEEQDVDIENQYYNSKGM-VETDPEGALAGFDQVVKMEP--EKAEWGFKALKQTVKLYYKLGKYKEMMDAYREMLTY----------IKSAVTRNYSEKCINNIMDFVSGSASQNFSLLQEFYQTTLKALEEA---------------KNERLWFKTNLKLCKIWF------DMGEY-----------------------------------------------GRMSKILKELHKSCQR------EDGS---DDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELN-FPEKDVEQLLVSLILDNRIQGHIDQVNKLLERGDRS 408
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|703095873|ref|XP_010095657.1| (COP9 signalosome complex subunit 2 [Morus notabilis] >gi|587872504|gb|EXB61746.1| COP9 signalosome complex subunit 2 [Morus notabilis]) HSP 1 Score: 366.696 bits (940), Expect = 2.877e-119 Identity = 210/499 (42.08%), Postives = 298/499 (59.72%), Query Frame = 0 Query: 7 DMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSP--SLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLIL----DGKVGQGVRLLRAEERT 499 D + E+Y FEYSDEE EE DV +EN YY +KGL + D GA+ G EV+R+E E+ EWGFKALKQ+VK+ + LG+Y+ M+E Y +L + ++AVT+N +EK +++++D VS S+S SLLR Y TTL LE +N+RLWFKTNLKL + + GE+ GR+ +++K+L KSC+ EDGS D K+G+QLLEVYA+++Q++ K+++KLK LY+ AL I +PHPR +G+++ECGG+M+M E+ + A FF +FK YDEAG+ RR LKYLVLA+ML S ++PFD QEAKPYK + E++AM NLI A+Q +++ FE ILK++R+ + D F+R I+ LL +RTQV+ KL+ PYTR+ + I++ELN +PE+DVE LLVSLIL DG + Q RLL +R+ Sbjct: 10 DADMEDYGFEYSDEEPEEQDVDIENQYYNSKGL-VETDPEGALAGFAEVVRMEP--EKAEWGFKALKQTVKLYYRLGRYKEMMEAYRVMLTY----------IKSAVTRNYSEKCINNIMDFVSGSASQNFSLLREFYQTTLKALEDA---------------KNERLWFKTNLKLCKIWF------DMGEY-----------------------------------------------GRMSKILKELHKSCQK------EDGS---DDQKKGSQLLEVYAIEIQMYTETKNNKKLKQLYQKALAIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELN-VPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRS 417
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|1149783219|ref|XP_020154253.1| (COP9 signalosome complex subunit 2 [Aegilops tauschii subsp. tauschii] >gi|326496011|dbj|BAJ90627.1| predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 366.311 bits (939), Expect = 2.946e-119 Identity = 207/499 (41.48%), Postives = 299/499 (59.92%), Query Frame = 0 Query: 7 DMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSP--SLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILD----GKVGQGVRLLRAEERT 499 D + E+Y FEYSD+E EE DV +EN YY +KG+ + D GA+ G V+R+E E+ EWGFKALKQ+VK+ + LG+Y+ M++ Y +L + ++AVT+N +EK +++++D VS S+S +LL+ Y TTL LE +N+RLWFKTNLKL + + GE+ GR+ +++K+L KSC+ EDGS D K+GTQLLEVYA+++Q++ K+++KLK+LY+ AL I +PHPR +G+++ECGG+M+M E+ + A FF +FK YDEAG+PRR LKYLVLA+ML S ++PFD QEAKPYK + E++AM NLI A+Q +D+ FE ILK++R+ + D F+R I+ LL IRTQV+ KL+ PYTR+ + I++ELN +PE+DVE LLVSLILD G + Q +LL +R+ Sbjct: 4 DADMEDYGFEYSDDEPEEQDVDIENQYYNSKGM-VETDPEGALAGFDAVVRMEP--EKAEWGFKALKQTVKLYYKLGKYKEMMDAYREMLTY----------IKSAVTRNYSEKCINNIMDFVSGSASQHFNLLQEFYQTTLKALEEA---------------KNERLWFKTNLKLCKIWF------DMGEY-----------------------------------------------GRMSKILKELHKSCQK------EDGS---DDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWADAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELN-VPEKDVEQLLVSLILDNRVQGHIDQVNKLLECGDRS 411
BLAST of EWM29476.1 vs. NCBI_GenBank
Match: gi|223943737|gb|ACN25952.1| (unknown [Zea mays] >gi|1142673359|gb|ONM31402.1| COP9 signalosome complex subunit 2 [Zea mays]) HSP 1 Score: 366.311 bits (939), Expect = 3.505e-119 Identity = 209/499 (41.88%), Postives = 298/499 (59.72%), Query Frame = 0 Query: 7 DMEEEEYDFEYSDEEVEEADVVLENAYYAAKGLKAQGDLAGAVEGMQEVLRLEAAGERGEWGFKALKQSVKMLFALGQYEAMLERYVFLLDHYTVTPASFHGARAAVTQNVAEKGLDSVLDLVSSSSSP--SLLRALYDTTLARLEGGEESGREGRAEGGARRRNQRLWFKTNLKLGHLLLSEAMQKEGGEHRAWRPSSLLLPLVSGSIPSGRGSPLILTLHCLLSPSFLPSEESVRLLGRLQRLIKDLLKSCEGPQEGPGEDGSAGGDTIKRGTQLLEVYALQMQLFALQKDSRKLKDLYKLALGITWGVPHPRTLGVLQECGGRMYMDEKDYNAAIQAFFSSFKCYDEAGDPRRFTLLKYLVLASMLHASTIDPFDSQEAKPYKEEREVVAMRNLILAFQNHDVKAFETILKTHRQALTKDTFVRANIDQLLITIRTQVITKLLVPYTRVSLAHIARELNDIPEEDVESLLVSLILD----GKVGQGVRLLRAEERT 499 D + E+Y FEYSDEE EE DV +EN YY +KGL + D GA+ G +V+ +E E+ EWGFKALKQ+VK+ + LG+Y+ M++ Y +L + ++AVT+N +EK +++++D VS S+S +LL+ Y TTL LE +N+RLWFKTNLKL + + GE+ GR+ +++K+L KSC+ EDGS D K+GTQLLEVYA+++Q++ K+++KLK+LY+ AL I +PHPR +G+++ECGG+M+M E+ + A FF +FK YDEAG+PRR LKYLVLA+ML S ++PFD QEAKPYK + E++AM NLI A+Q +D+ FE ILK++R+ + D F+R I+ LL IRTQV+ KL+ PYTR+ + I++ELN PE+DVE LLVSLILD G + Q +LL ER+ Sbjct: 4 DADMEDYGFEYSDEEPEEQDVDIENQYYNSKGL-VETDPEGALAGFDQVVSMEP--EKAEWGFKALKQTVKLYYKLGKYKEMMDAYREMLTY----------IKSAVTRNYSEKCINNIMDFVSGSASQNFTLLQEFYQTTLKALEEA---------------KNERLWFKTNLKLCKIWF------DIGEY-----------------------------------------------GRMSKILKELHKSCQR------EDGS---DDQKKGTQLLEVYAIEIQMYTETKNNKKLKELYQRALSIKSAIPHPRIMGIIRECGGKMHMAERQWAEAATDFFEAFKNYDEAGNPRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQKNDIMEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELN-FPEKDVEQLLVSLILDNRIQGHIDQVNKLLERGERS 411 The following BLAST results are available for this feature:
BLAST of EWM29476.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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