EWM29491.1, cds1182 (CDS) Nannochloropsis gaditana

Overview
NameEWM29491.1
Unique Namecds1182
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1419535..1419621 -
Alignment locationCM002456.1:1418617..1419397 -
Alignment locationCM002456.1:1418432..1418483 -
Alignment locationCM002456.1:1418310..1418343 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29491.1
Producthistone acetyltransferase hac12
Orig transcript idgnl|cribi|Naga_101882g1.2338.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1419535..1419621 -
CM002456.1supercontigCM002456.1:1418617..1419397 -
CM002456.1supercontigCM002456.1:1418432..1418483 -
CM002456.1supercontigCM002456.1:1418310..1418343 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR031162CBP_P300_HAT
Homology
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BLAST of EWM29491.1 vs. NCBI_GenBank
Match: gi|585112043|gb|EWM29491.1| (histone acetyltransferase hac12 [Nannochloropsis gaditana])

HSP 1 Score: 600.512 bits (1547), Expect = 0.000e+0
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 
Query:    1 MKESFIVARLYPPEYAHACAERLKREKEEAQKTKSQPLKLEGSSSSSSAGGKETALPSSKGGPKEGAKEGSGVKEEVPQEGKEEGKEGGSSADAMASVKEEEEGEEGKEGGTPTAAAMEVETSVSAAAVVAEEEQQGAEEEGLPKGGGEEGSKTPSGDVASQVKKEGQGEGEGPSTGAGGVPVAAPAEKEAGATPSVPAESGEEADKAGAGKEKGNGEGEEKEKGKEAGTEGEGEGGTEAGTEGGAGEGGKASMGPPEAADGKDETLDPDAGEECEIFDTRSEFLDFCKGNHYQFDCLRRAKHSSMIGPVWFADARR 317
            MKESFIVARLYPPEYAHACAERLKREKEEAQKTKSQPLKLEGSSSSSSAGGKETALPSSKGGPKEGAKEGSGVKEEVPQEGKEEGKEGGSSADAMASVKEEEEGEEGKEGGTPTAAAMEVETSVSAAAVVAEEEQQGAEEEGLPKGGGEEGSKTPSGDVASQVKKEGQGEGEGPSTGAGGVPVAAPAEKEAGATPSVPAESGEEADKAGAGKEKGNGEGEEKEKGKEAGTEGEGEGGTEAGTEGGAGEGGKASMGPPEAADGKDETLDPDAGEECEIFDTRSEFLDFCKGNHYQFDCLRRAKHSSMIGPVWFADARR
Sbjct:    1 MKESFIVARLYPPEYAHACAERLKREKEEAQKTKSQPLKLEGSSSSSSAGGKETALPSSKGGPKEGAKEGSGVKEEVPQEGKEEGKEGGSSADAMASVKEEEEGEEGKEGGTPTAAAMEVETSVSAAAVVAEEEQQGAEEEGLPKGGGEEGSKTPSGDVASQVKKEGQGEGEGPSTGAGGVPVAAPAEKEAGATPSVPAESGEEADKAGAGKEKGNGEGEEKEKGKEAGTEGEGEGGTEAGTEGGAGEGGKASMGPPEAADGKDETLDPDAGEECEIFDTRSEFLDFCKGNHYQFDCLRRAKHSSMIGPVWFADARR 317
The following BLAST results are available for this feature:
BLAST of EWM29491.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112043|gb|EWM29491.1|0.000e+0100.00histone acetyltransferase hac12 [Nannochloropsis g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1183rna1183Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications