EWM29507.1, cds1167 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|585112067|gb|EWM29507.1| (wos2 protein [Nannochloropsis gaditana]) HSP 1 Score: 403.29 bits (1035), Expect = 4.061e-142 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query: 1 MTNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLEGGMDFSQLGGMGGMGGMGGMGGMGGMGGMGGMGNLQEMMAGMGKGDAGAYGGDEDSDDEELPDLESDEAEEGGKEGKE 203
MTNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLEGGMDFSQLGGMGGMGGMGGMGGMGGMGGMGGMGNLQEMMAGMGKGDAGAYGGDEDSDDEELPDLESDEAEEGGKEGKE
Sbjct: 1 MTNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLEGGMDFSQLGGMGGMGGMGGMGGMGGMGGMGGMGNLQEMMAGMGKGDAGAYGGDEDSDDEELPDLESDEAEEGGKEGKE 203
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|553190853|ref|XP_005855276.1| (wos2 protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293777|gb|EKU21077.1| wos2 protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 267.314 bits (682), Expect = 1.975e-89 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query: 1 MTNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLEGGM 128
MTNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLEGGM
Sbjct: 1 MTNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLEGGM 128
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|299471956|emb|CBN79635.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 151.369 bits (381), Expect = 3.348e-42 Identity = 76/124 (61.29%), Postives = 92/124 (74.19%), Query Frame = 0
Query: 2 TNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLE 125
N APVKWAQR+DSIY+T+ LPDV DE+++L + L F G SN K Y LEFL V + S WKVLPRSIQ+ + KE ED FWERLLKDK LEKTNVK+DW+++VDEDE+E FDMS L+
Sbjct: 3 VNTAPVKWAQRADSIYLTLDLPDVKDEQLKLTKDMLSFSGTSNDKKYALDLEFLHDVNSEKSTWKVLPRSIQMHIMKETEDDAFWERLLKDKSLEKTNVKIDWNKFVDEDEDEGGEGFDMSALD 126
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|1210531625|dbj|GAX09981.1| (hypothetical protein FisN_11Lh028 [Fistulifera solaris]) HSP 1 Score: 142.895 bits (359), Expect = 1.814e-39 Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0
Query: 3 NVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLE 125
N AP+KWAQRSDSIY+TI L DV DE I L +L FKG S GK+Y +EF + V +GS +K LPRS+Q+ + K+E D FW RLLKDK EK VK+DWDRYVDED+E FD S L+
Sbjct: 4 NTAPIKWAQRSDSIYLTIALSDVKDESINLKDATLTFKGTSEGKEYAIDIEFFKDVNAEGSTYKTLPRSVQMHIMKKESDEEFWPRLLKDKNKEKNQVKIDWDRYVDEDDEAD--GFDTSALD 124
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|1210526861|dbj|GAX14509.1| (hypothetical protein FisN_11Hh028 [Fistulifera solaris]) HSP 1 Score: 142.51 bits (358), Expect = 2.558e-39 Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0
Query: 3 NVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLE 125
N AP+KWAQRSDSIY+TI L DV DE I L +L FKG S GK+Y +EF + V +GS +K LPRS+Q+ + K+E D FW RLLKDK EK VK+DWDRYVDED+E FD S L+
Sbjct: 4 NTAPIKWAQRSDSIYLTIALSDVKDESINLKDATLTFKGTSEGKEYAIDIEFFKDVNAEGSTYKTLPRSVQMHIMKKESDEEFWPRLLKDKTKEKNQVKIDWDRYVDEDDEAD--GFDTSALD 124
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|219109904|ref|XP_002176705.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411240|gb|EEC51168.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 137.117 bits (344), Expect = 3.996e-37 Identity = 75/126 (59.52%), Postives = 88/126 (69.84%), Query Frame = 0
Query: 1 MTNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEEDT-GFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLE 125
+ N AP+KWAQRSDS+Y+TI LPDV DE I L +L FKG S K YE ++EF + V S +KVLPRSIQ+ + K EED FW RLLKDK LEK VK+DWDRYVDEDEE+ FD S LE
Sbjct: 6 INNTAPIKWAQRSDSLYLTIALPDVKDETINLEDQTLKFKGTSGDKSYEVNIEFFKKVDAKDSTYKVLPRSIQMHVMKHEEDREEFWPRLLKDKALEKNQVKIDWDRYVDEDEEDE--GFDTSALE 129
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|223995981|ref|XP_002287664.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976780|gb|EED95107.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 135.576 bits (340), Expect = 1.938e-36 Identity = 75/131 (57.25%), Postives = 89/131 (67.94%), Query Frame = 0
Query: 2 TNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQILLKKEEED-------TGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLE 125
N AP+KWAQRSDS+Y+TI LPDV +E I L +L FKGKS GKDYE + F ++V +GS +KVLPRS+Q+ + K + FW RLLKDK LEK VKVDWDRYVDEDEEE FD S LE
Sbjct: 4 VNTAPIKWAQRSDSLYITIALPDVKEESINLENQTLKFKGKSEGKDYEVDIVFFKSVDAEGSTYKVLPRSVQMHVMKASKKDGDDDEEEEFWPRLLKDKALEKNQVKVDWDRYVDEDEEEE--GFDTSALE 132
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|1072236578|gb|OEU21306.1| (HSP20-like chaperone [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 134.035 bits (336), Expect = 3.761e-36 Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 0
Query: 2 TNVAPVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDGSVWKVLPRSIQI-LLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLE 125
TN AP+K+AQR DSIY+TI L DV DE I L L F+G S GK YE ++EF + V +GS + VLPRS+Q+ +LK E+E+ FW RLLKDK LEK +K+DWDRYV DE+E FDMSN++
Sbjct: 3 TNAAPIKYAQRKDSIYLTIALADVKDETIVLTDTELKFEGTSGGKKYEVNIEFFKKVDSEGSTYNVLPRSVQMHILKDEKEEEEFWTRLLKDKALEKNQIKIDWDRYV--DEDEEEEGFDMSNMD 125
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|1173957166|gb|OQS03760.1| (hypothetical protein THRCLA_03944 [Thraustotheca clavata]) HSP 1 Score: 132.88 bits (333), Expect = 7.879e-36 Identity = 84/188 (44.68%), Postives = 101/188 (53.72%), Query Frame = 0
Query: 5 APVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDG--SVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLEGGMDFSQLGGMGGMGGMGGMGGMGGMGGMGGMGNLQEMMAGMGKGDAGAYGGDEDSDDEELPDLE 190
APVKWAQR+DS+YVT+ LPDV DEK+ L +SL F G SN + YE LEFL V S W PR++ + K++++ FW LLKDK LEKTNVKVDW++YVDEDE E + FDMS L GG GG M GGM G + EELPDLE
Sbjct: 10 APVKWAQRADSLYVTVDLPDVKDEKVVLTNSSLKFTGTSNQQKYEVTLEFLHEVDTAAKESKWAATPRNVHFYILKKDKEAPFWPHLLKDKALEKTNVKVDWNKYVDEDEAEDDQGFDMSALSGG------GGFDINQMMAQQGGMPGDMDEEDSDD------------------------EELPDLE 167
BLAST of EWM29507.1 vs. NCBI_GenBank
Match: gi|953486346|emb|CEG49677.1| (HSP90 co-chaperone p23 [Plasmopara halstedii]) HSP 1 Score: 130.568 bits (327), Expect = 4.882e-35 Identity = 84/191 (43.98%), Postives = 110/191 (57.59%), Query Frame = 0
Query: 5 APVKWAQRSDSIYVTICLPDVTDEKIELGTNSLDFKGKSNGKDYECHLEFLRTVKKDG--SVWKVLPRSIQILLKKEEEDTGFWERLLKDKQLEKTNVKVDWDRYVDEDEEESNPNFDMSNLEGGMDFSQLGGMGGMGGMGGMGGMGGMGGMGGMGNLQEMMAGMGKGDAGAYGGDEDSDDEELPDLESDE 193
APVKWAQR D++YVT+ LPDV DEK+ L + +L FKG SNGK YE L+F + V + S+W R++ + K+ +D FW RLL DK LEKTNVKVDW ++VDEDE+E FDMS L GG GG ++ EMMA + AG DSDDE++PDL+ ++
Sbjct: 9 APVKWAQRKDALYVTVDLPDVKDEKVSLNSKNLTFKGTSNGKVYEVTLDFFKEVDAEAKDSIWAKTDRNLHFHIVKKNQDEEFWPRLLVDKNLEKTNVKVDWTKFVDEDEDEEPSGFDMSALNGG---------------------------GGF-DMNEMMAA--QNGAGMMDDGSDSDDEDMPDLDPND 169 The following BLAST results are available for this feature:
BLAST of EWM29507.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|