EWM29571.1, cds1156 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|585112142|gb|EWM29571.1| (uncharacterized protein Naga_100006g11 [Nannochloropsis gaditana]) HSP 1 Score: 1157.13 bits (2992), Expect = 0.000e+0 Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0 Query: 1 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDASTVPTSDNSVPAPSAAPVASSLENSGSHAFAKCRERQRRVHGLNGLGPGWLVYESIGKIGLLKKVKNTLYNMSHILTFKMLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 558 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDASTVPTSDNSVPAPSAAPVASSLENSGSHAFAKCRERQRRVHGLNGLGPGWLVYESIGKIGLLKKVKNTLYNMSHILTFKMLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS Sbjct: 1 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDASTVPTSDNSVPAPSAAPVASSLENSGSHAFAKCRERQRRVHGLNGLGPGWLVYESIGKIGLLKKVKNTLYNMSHILTFKMLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 558
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|553188044|ref|XP_005854725.1| (hypothetical protein NGA_0375300 [Nannochloropsis gaditana CCMP526] >gi|422294338|gb|EKU21638.1| hypothetical protein NGA_0375300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 496.123 bits (1276), Expect = 2.182e-172 Identity = 238/239 (99.58%), Postives = 238/239 (99.58%), Query Frame = 0 Query: 1 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRF 239 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSR Sbjct: 1 MKDTPCLSSLPATQYCSSFPWPLSMISVSTRRARPSRRGARLRRSPTLMPTFLLLLLVAPSATFRFSFAATNFPSGTATGDGRLEVYNSISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRL 239
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|553187201|ref|XP_005854563.1| (putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|553188032|ref|XP_005854721.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|422294334|gb|EKU21634.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|422294494|gb|EKU21794.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 382.874 bits (982), Expect = 1.089e-128 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 Query: 371 MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 558 MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS Sbjct: 1 MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGDIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTVAPPS 188
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|585106548|gb|EWM24920.1| (uncharacterized protein Naga_100092g2 [Nannochloropsis gaditana]) HSP 1 Score: 172.94 bits (437), Expect = 2.235e-47 Identity = 84/148 (56.76%), Postives = 108/148 (72.97%), Query Frame = 0 Query: 413 KQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVY-----GDIALNDGYYTVTFDSPEGKKVTK-ARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTV 554 ++V EV TT++WL+TVT + T+ AETAALYA D VLW TVS ELRVNP EIR YFD FA LP L+V+ Y+PY+R++ G+ A+NDGYY + P+G++V K ARY FVY+++ G W I+DHHSS +P APAGL KATTV Sbjct: 39 ERVKQEVLQTTQEWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRKE--GGKWMIVDHHSSLLPTAPAGLAKATTV 184
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|553185748|ref|XP_005854298.1| (putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|553190747|ref|XP_005855250.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|422293807|gb|EKU21107.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526] >gi|422294759|gb|EKU22059.1| putative protein conserved in bacteria with a cystatin-like fold containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 171.014 bits (432), Expect = 1.224e-46 Identity = 84/148 (56.76%), Postives = 107/148 (72.30%), Query Frame = 0 Query: 413 KQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVY-----GDIALNDGYYTVTFDSPEGKKVTK-ARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTV 554 ++V EV TT+KWL+TVT + T+ AETAALYA D VLW TVS ELRVNP EIR YFD FA LP L+V+ Y+PY+R++ G+ A+NDGYY + P+G++V K ARY FVY+++ W I+DHHSS +P APAGL KATTV Sbjct: 39 ERVKQEVLQTTQKWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRKEGEK--WMIVDHHSSLLPTAPAGLAKATTV 184
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|585106549|gb|EWM24921.1| (uncharacterized protein Naga_100092g2 [Nannochloropsis gaditana]) HSP 1 Score: 174.481 bits (441), Expect = 4.158e-46 Identity = 84/148 (56.76%), Postives = 108/148 (72.97%), Query Frame = 0 Query: 413 KQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVY-----GDIALNDGYYTVTFDSPEGKKVTK-ARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATTV 554 ++V EV TT++WL+TVT + T+ AETAALYA D VLW TVS ELRVNP EIR YFD FA LP L+V+ Y+PY+R++ G+ A+NDGYY + P+G++V K ARY FVY+++ G W I+DHHSS +P APAGL KATTV Sbjct: 183 ERVKQEVLQTTQEWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFAALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARYSFVYRKE--GGKWMIVDHHSSLLPTAPAGLAKATTV 328
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|299469679|emb|CBN76533.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 173.326 bits (438), Expect = 4.664e-45 Identity = 87/206 (42.23%), Postives = 120/206 (58.25%), Query Frame = 0 Query: 90 ISRGGFFSETWDVHHSKSKMRVRQVPGDGSCLFHAIYVALAYATNGSHPQEDYEAMCKAAGVLRQTALDYLSDDPSRLLTVTYNQDMKSQELLDMTSKEMGLSAEQYLVRLRDPKEWGGGLEIVALANALERPIFLYELKPVGLLFWSRFVFKKMVECGMPKFSPKKSLHILIADCNFPDCAPYFYNKAGNHFLALFPCEDASTVP 295 I R GF ++++ V + M VRQVPGDG+CLFHAI L +A NG+HP D + + LR+ A+DYL D+ + L + + + ELL + + + ++AE Y +R WGGG EIVAL+NAL RPI +YEL G+ F F++M G P F K+++HIL AD FP+ P GNHFLALFPC + P Sbjct: 31 IKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRKVAVDYLVDNLKKTLYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGV----SFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALFPCPETVASP 232
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|738538870|ref|WP_036487251.1| (cystatin [Myxosarcina sp. GI1]) HSP 1 Score: 141.354 bits (355), Expect = 1.856e-35 Identity = 82/183 (44.81%), Postives = 107/183 (58.47%), Query Frame = 0 Query: 371 MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRPSHKQVV---AEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYG-DIALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLK 549 M+L+++ + Q+ R KK F ++ + TI S Q EVA TT+ WL TVT E ALYA+DGVLW TVS ++R P EI DYF+ FARLP L VS YK +R+Y D+A+N GYYT TF K ARY FVY+++ + WEII+HHSSA+P AP L+ Sbjct: 1 MILSQNSSFQTGR-GLVWNKKKLFSFIFVTALLVTITPLSSFAQTEKAEQEVAETTDTWLNTVTSGSEGVVDEVVALYAEDGVLWGTVSEQVRDTPAEIGDYFEFFARLPELSVSSYKGCVRMYDEDLAINSGYYTFTFSENGQTKEVPARYSFVYQKN-GNNQWEIIEHHSSALPEAPETLE 181
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|1186534701|ref|WP_085435675.1| (DUF4440 domain-containing protein [unicellular cyanobacterium SU2]) HSP 1 Score: 139.813 bits (351), Expect = 8.580e-35 Identity = 79/186 (42.47%), Postives = 104/186 (55.91%), Query Frame = 0 Query: 371 MLLAKSLATQSLRLQASITAKKAFPVHLLSTVRETIPSRP-----SHKQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGD-IALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKK 550 M L+K LA S + + + +S I P ++ EVA T+ WL TVT E ALYA+DGVLW TVS ++R P EIRDYF FA+LP+L VS YK +R++ D +A+N GYYT T+ K ARY FVY++D + WEII+HHSSA+P AP L+K Sbjct: 1 MSLSKDLAISSCFKFFDLVGNRKKLISFISVTALLIAMTPLSSFAQMEKAEKEVAEMTDIWLNTVTSGSEEVVDEVVALYAEDGVLWGTVSEQVRDTPAEIRDYFQYFAKLPDLSVSSYKGCVRMHDDNLAINTGYYTFTYSKDGRTKEVPARYSFVYQKD-GNNKWEIIEHHSSALPEAPEALQK 185
BLAST of EWM29571.1 vs. NCBI_GenBank
Match: gi|518336514|ref|WP_019506721.1| (hypothetical protein [Pleurocapsa sp. PCC 7319]) HSP 1 Score: 139.428 bits (350), Expect = 1.106e-34 Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = 0 Query: 413 KQVVAEVAATTEKWLETVTGQKPTSPAETAALYAKDGVLWATVSTELRVNPKEIRDYFDVFARLPNLKVSDYKPYIRVYGD-IALNDGYYTVTFDSPEGKKVTKARYVFVYKRDEASGAWEIIDHHSSAMPVAPAGLKKATT 553 K+ EVA +T+ WL+TVT E ALYA+DGVLW TVS ++R P EI DYF+ FA+LP L VS YK +RVY + +A+N GYYT T+ KV ARY FVY + ++ WEII+HHSSA+P AP L+ +T Sbjct: 53 KKAEKEVAQSTDIWLDTVTSGSEEVVDEVVALYAEDGVLWGTVSEQVRSTPVEISDYFEYFAKLPELSVSSYKGCVRVYDENVAINTGYYTFTYSKDGQTKVVPARYSFVYHKG-SNNQWEIIEHHSSALPEAPETLETVST 193 The following BLAST results are available for this feature:
BLAST of EWM29571.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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