EWM29552.1, cds1145 (CDS) Nannochloropsis gaditana

Overview
NameEWM29552.1
Unique Namecds1145
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1306164..1306307 +
Alignment locationCM002456.1:1306434..1307577 +
Alignment locationCM002456.1:1307679..1308058 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29552.1
Productnudix hydrolase
Orig transcript idgnl|cribi|Naga_100006g21.8641.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1306164..1306307 +
CM002456.1supercontigCM002456.1:1306434..1307577 +
CM002456.1supercontigCM002456.1:1307679..1308058 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR020084NUDIX_hydrolase_CS
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase_dom-like
IPR020476Nudix_hydrolase
Homology
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|585112123|gb|EWM29552.1| (nudix hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 1130.55 bits (2923), Expect = 0.000e+0
Identity = 555/555 (100.00%), Postives = 555/555 (100.00%), Query Frame = 0
Query:    1 MGFGGNVVEWRVFFRESAVEGVSFPFFHDAALLTSLNAPRAQAEKEEERTDTYLSVPHEAVGLKHRGTKGKLEVKIRTAAINEHEGNGVAGMEKWVKYKLGKGTKGFGEEEVKNRQLIELENVLKDHHLFDPRVYGSLKEQIQERESRNDTTPMSRGLEVQQQKSVDKRRVVGVYTGLTLTGNGKAGKRTEVHDRQVGLAERVLAHLGLEGHRGQERKADEKRQRAVEVMIEDCLLKVWSEGSNVGKRESIGWRTFAVEGKEKDVQGFLSETALGRWIYAGGQNSRAVVVGYPGFLISLDKEQWEEQGTEEYGRAKEEHRGGAVGEDQAGQSRGSKERMDLSECSTDPARETALEAQITHVHGSDRPPEVCQVAAAAVAAVTASRTFPIPPLPTNPHRGVKKAFKLKQISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKALRLRGNELMKWAEYVEKGGSVYPLSLLAEEGESCPLL 555
            MGFGGNVVEWRVFFRESAVEGVSFPFFHDAALLTSLNAPRAQAEKEEERTDTYLSVPHEAVGLKHRGTKGKLEVKIRTAAINEHEGNGVAGMEKWVKYKLGKGTKGFGEEEVKNRQLIELENVLKDHHLFDPRVYGSLKEQIQERESRNDTTPMSRGLEVQQQKSVDKRRVVGVYTGLTLTGNGKAGKRTEVHDRQVGLAERVLAHLGLEGHRGQERKADEKRQRAVEVMIEDCLLKVWSEGSNVGKRESIGWRTFAVEGKEKDVQGFLSETALGRWIYAGGQNSRAVVVGYPGFLISLDKEQWEEQGTEEYGRAKEEHRGGAVGEDQAGQSRGSKERMDLSECSTDPARETALEAQITHVHGSDRPPEVCQVAAAAVAAVTASRTFPIPPLPTNPHRGVKKAFKLKQISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKALRLRGNELMKWAEYVEKGGSVYPLSLLAEEGESCPLL
Sbjct:    1 MGFGGNVVEWRVFFRESAVEGVSFPFFHDAALLTSLNAPRAQAEKEEERTDTYLSVPHEAVGLKHRGTKGKLEVKIRTAAINEHEGNGVAGMEKWVKYKLGKGTKGFGEEEVKNRQLIELENVLKDHHLFDPRVYGSLKEQIQERESRNDTTPMSRGLEVQQQKSVDKRRVVGVYTGLTLTGNGKAGKRTEVHDRQVGLAERVLAHLGLEGHRGQERKADEKRQRAVEVMIEDCLLKVWSEGSNVGKRESIGWRTFAVEGKEKDVQGFLSETALGRWIYAGGQNSRAVVVGYPGFLISLDKEQWEEQGTEEYGRAKEEHRGGAVGEDQAGQSRGSKERMDLSECSTDPARETALEAQITHVHGSDRPPEVCQVAAAAVAAVTASRTFPIPPLPTNPHRGVKKAFKLKQISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKALRLRGNELMKWAEYVEKGGSVYPLSLLAEEGESCPLL 555          
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|1134881840|gb|OMJ79452.1| (hypothetical protein SteCoe_20554 [Stentor coeruleus])

HSP 1 Score: 157.147 bits (396), Expect = 1.706e-39
Identity = 81/161 (50.31%), Postives = 104/161 (64.60%), Query Frame = 0
Query:  399 GVKKAFKLKQISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKALR-----LRGNELMKWAEYVEKGGSVYPLSLLAEEGESCPL 554
             V   F     S+VV R+ D G +LAV+ET+++GWWLPAG VDPGE F +AA+RE LEEA I + LRGIL VEH +  P+  R+RVIF   PI      KS+ D ES  ARWVT+ E++ L      LRG EL +W  Y+EKGG++ P+S L  E ES P+
Sbjct:   26 AVXVPFSTHGFSVVVCRNTD-GRWLAVKETRNRGWWLPAGLVDPGEDFIQAAHRECLEEAFIRIKLRGILRVEHSIYGPTHARMRVIFFAVPIDNNQIPKSIPDNESEEARWVTLDELRMLAKRSPGLRGPELYEWGNYIEKGGAIAPMSFLCREDESIPI 185          
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|1134878744|gb|OMJ76512.1| (hypothetical protein SteCoe_24088 [Stentor coeruleus])

HSP 1 Score: 153.295 bits (386), Expect = 1.926e-38
Identity = 78/152 (51.32%), Postives = 105/152 (69.08%), Query Frame = 0
Query:  404 FKLKQISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKALR-----LRGNELMKWAEYVEKGGSVYPLSLLAEEGE 550
            F     +LVV RHPD G +LAV+ET+++GWWLPAG V+ GET+ +AA+RE LEEAG+ V L+G+L VEH +  P+  R+RVIF   P+ P+ P+K   D+ES  A WVT++++K L      LRG EL +W  Y+EKGG V PL LL +E E
Sbjct:    6 FMTHNFALVVCRHPD-GRWLAVKETRNRGWWLPAGLVEQGETYFQAAHREVLEEAGLRVDLKGVLRVEHSVYGPTQARMRVIFFAVPLDPSQPVKKRKDKESEEACWVTLEDLKILARGTPGLRGPELYEWGSYLEKGGIVAPLHLLCQEDE 156          
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|470512782|ref|XP_004352541.1| (hydrolase, NUDIX domain containing protein [Acanthamoeba castellanii str. Neff] >gi|440802125|gb|ELR23064.1| hydrolase, NUDIX domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 147.132 bits (370), Expect = 1.724e-36
Identity = 78/148 (52.70%), Postives = 97/148 (65.54%), Query Frame = 0
Query:  408 QISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEM-----KALRLRGNELMKWAEYVEKGGSVYPLSLLAEEGE 550
              SLVVV+HPD G FLAV E++ +GWWLPAG VDPG+    AA RET EEAGI V L GIL +EH ++    GR R++F   PI    P KS  D+ES GA WVT+ E+      A  LRG EL+ W  YV+ GG+++PL+LL  EGE
Sbjct:   48 NFSLVVVQHPD-GRFLAVHESRGRGWWLPAGFVDPGDDLMSAAIRETKEEAGIDVRLEGILRIEHTMTL-YRGRCRIVFFARPIDENQPPKSEPDKESEGAAWVTLDELVQLGQSAPGLRGPELLDWGRYVQGGGAIFPLTLLTREGE 193          
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|669167008|ref|XP_008619066.1| (hypothetical protein SDRG_14695 [Saprolegnia diclina VS20] >gi|530729250|gb|EQC27492.1| hypothetical protein SDRG_14695 [Saprolegnia diclina VS20])

HSP 1 Score: 147.517 bits (371), Expect = 4.682e-36
Identity = 77/149 (51.68%), Postives = 101/149 (67.79%), Query Frame = 0
Query:  406 LKQISLVVVRHPDTGNFLAVEETK--DKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKAL----RLRGNELMKWAEYVEKGGSVYPLSLLAEE 548
            +   ++VVVRHP T  +LAV+ET   ++ WWLPAG V+ GETF  AA RET EEAGI + L GIL VEH    P + R+R++F  EP+   APLK+ AD+ES+GA W TV E++A     +LRG EL+ WA Y+E+GG V PL+ L  E
Sbjct:    1 MHCFAVVVVRHPRTKRWLAVQETSKHNRLWWLPAGRVETGETFPAAAVRETREEAGIDIRLIGILRVEHTPLGPQSDRMRIVFYAEPMDADAPLKTTADDESLGAVWTTVSELEAWNAAGQLRGKELLNWALYLEQGGEVAPLATLGAE 149          
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|403338304|gb|EJY68384.1| (hypothetical protein OXYTRI_11002 (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 148.673 bits (374), Expect = 5.805e-36
Identity = 69/148 (46.62%), Postives = 100/148 (67.57%), Query Frame = 0
Query:  404 FKLKQISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKAL-RLRGNELMKWAEYVEKGGSVYPLSLLAEEGE 550
            FK  Q +LV+ R+ D G +LAV ET+++GWW+P G VD GE+F  AA RET+EE GI + L+GIL ++H L      R+RVIF  EPI      K   D+ S+ A+WVTV + KA   +RG+EL++W  Y+++GG ++PLSLL ++ +
Sbjct:    7 FKTYQFALVICRNFD-GRYLAVNETQNRGWWIPGGAVDAGESFDVAALRETMEEGGIKIKLKGILKIDHDLFGVDQVRMRVIFFAEPIDKKQTPKQYHDKHSLEAQWVTVDQFKAKNNIRGDELIEWGTYIDQGGQIFPLSLLMQDSK 153          
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|403339115|gb|EJY68806.1| (hypothetical protein OXYTRI_10577 (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 148.288 bits (373), Expect = 9.195e-36
Identity = 69/148 (46.62%), Postives = 100/148 (67.57%), Query Frame = 0
Query:  404 FKLKQISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKAL-RLRGNELMKWAEYVEKGGSVYPLSLLAEEGE 550
            FK  Q +LV+ R+ D G +LAV ET+++GWW+P G VD GE+F  AA RET+EE GI + L+GIL ++H L      R+RVIF  EPI      K   D+ S+ A+WVTV + KA   +RG+EL++W  Y+++GG ++PLSLL ++ +
Sbjct:    7 FKTYQFALVICRNFD-GRYLAVNETQNRGWWIPGGAVDAGESFDVAALRETMEEGGIKIKLKGILKIDHDLFGVDQVRMRVIFFAEPIDKKQTPKQYHDKHSLEAQWVTVDQFKAKNNIRGDELIEWGTYIDQGGQIFPLSLLMQDSK 153          
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|813156709|ref|XP_012201703.1| (hypothetical protein SPRG_06846 [Saprolegnia parasitica CBS 223.65] >gi|641533597|gb|KDO27578.1| hypothetical protein SPRG_06846 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 145.591 bits (366), Expect = 1.882e-35
Identity = 75/150 (50.00%), Postives = 101/150 (67.33%), Query Frame = 0
Query:  406 LKQISLVVVRHPDTGNFLAVEETK--DKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKAL----RLRGNELMKWAEYVEKGGSVYPLSLLAEEG 549
            +   ++VVVRHP T  +LAV+ET   ++ WWLPAG V+ GETF  AA RET EEAGI + L G+L VEH    P + R+R++F  EP+  +AP+K+ AD+ES+GA W TV E++A     +LR  EL+ WA Y+E+GG V PLS L  E 
Sbjct:    1 MHCFAVVVVRHPRTKRWLAVQETSKHNRLWWLPAGRVENGETFPAAAVRETREEAGIDIRLVGVLRVEHTPIGPQSDRMRIVFYAEPMDVSAPIKTTADDESLGAAWTTVPELQAWADAGQLRDEELLNWAMYLERGGEVAPLSTLGAES 150          
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|954197487|gb|KRX10173.1| (NUDIX hydrolase domain protein [Pseudocohnilembus persalinus])

HSP 1 Score: 144.821 bits (364), Expect = 2.780e-35
Identity = 71/154 (46.10%), Postives = 100/154 (64.94%), Query Frame = 0
Query:  397 HRGVKKAFKLKQISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAG--RLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEMKALRLRGNELMKWAEYVEKGGSVYPLSLLAEE 548
            H    KA KL   +LV+VR    G +L V+E  + G+WLP G VDPGE F +AA RE LEEAG+ + ++G+L  +H   SP  G  RLRVI+  EP+      KS+ D ES+GA +V   E+K ++LRG+E ++W +Y+EKGG +YPLS+ + E
Sbjct:  171 HNENYKANKLYAFALVIVRRKYDGKYLLVQEFANSGYWLPGGRVDPGEPFKKAAVRECLEEAGVNIEIKGVLSFQH---SPKKGYDRLRVIYYAEPVDDNQKAKSIPDYESVGACYVDKNEVKNIKLRGHEPLEWIDYLEKGGQIYPLSIFSGE 321          
BLAST of EWM29552.1 vs. NCBI_GenBank
Match: gi|290986831|ref|XP_002676127.1| (predicted protein [Naegleria gruberi] >gi|284089727|gb|EFC43383.1| predicted protein [Naegleria gruberi])

HSP 1 Score: 140.198 bits (352), Expect = 1.971e-34
Identity = 71/148 (47.97%), Postives = 93/148 (62.84%), Query Frame = 0
Query:  409 ISLVVVRHPDTGNFLAVEETKDKGWWLPAGHVDPGETFTEAAYRETLEEAGIGVVLRGILCVEHKLSSPSAGRLRVIFLGEPIHPTAPLKSVADEESIGARWVTVQEM-------KALRLRGNELMKWAEYVEKGGSVYPLSLLAEEG 549
             +LV++R+P +G FL VEE   +GWWLPAG VDPGETF +AA RETLEEAGI V L+ IL  E+        R RVIF  EP+     LKS+ D ES+ A+W + +E        +  +LRG E  +W +YV +G  +YPLS+L  EG
Sbjct:  104 FALVIIRNPVSGKFLLVEEGCSQGWWLPAGRVDPGETFQQAALRETLEEAGIHVELKNILRFEYSPYHDGGARSRVIFYAEPLEEDPVLKSIPDFESVCAKWFSYEEFENDFLQKRTKKLRGMEPFQWFKYVHEGKPMYPLSMLTLEG 251          
The following BLAST results are available for this feature:
BLAST of EWM29552.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112123|gb|EWM29552.1|0.000e+0100.00nudix hydrolase [Nannochloropsis gaditana][more]
gi|1134881840|gb|OMJ79452.1|1.706e-3950.31hypothetical protein SteCoe_20554 [Stentor coerule... [more]
gi|1134878744|gb|OMJ76512.1|1.926e-3851.32hypothetical protein SteCoe_24088 [Stentor coerule... [more]
gi|470512782|ref|XP_004352541.1|1.724e-3652.70hydrolase, NUDIX domain containing protein [Acanth... [more]
gi|669167008|ref|XP_008619066.1|4.682e-3651.68hypothetical protein SDRG_14695 [Saprolegnia dicli... [more]
gi|403338304|gb|EJY68384.1|5.805e-3646.62hypothetical protein OXYTRI_11002 (macronuclear) [... [more]
gi|403339115|gb|EJY68806.1|9.195e-3646.62hypothetical protein OXYTRI_10577 (macronuclear) [... [more]
gi|813156709|ref|XP_012201703.1|1.882e-3550.00hypothetical protein SPRG_06846 [Saprolegnia paras... [more]
gi|954197487|gb|KRX10173.1|2.780e-3546.10NUDIX hydrolase domain protein [Pseudocohnilembus ... [more]
gi|290986831|ref|XP_002676127.1|1.971e-3447.97predicted protein [Naegleria gruberi] >gi|28408972... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1146rna1146Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications