EWM29569.1, cds1135 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|585112140|gb|EWM29569.1| (hypothetical protein Naga_100006g31 [Nannochloropsis gaditana]) HSP 1 Score: 892.878 bits (2306), Expect = 0.000e+0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
Query: 1 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAWNFTREEGGEVEGMKSVGGVEGDAWVAGRDAKGGVAQG 437
MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAWNFTREEGGEVEGMKSVGGVEGDAWVAGRDAKGGVAQG
Sbjct: 1 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAWNFTREEGGEVEGMKSVGGVEGDAWVAGRDAKGGVAQG 437
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|585112141|gb|EWM29570.1| (hypothetical protein Naga_100006g31 [Nannochloropsis gaditana]) HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0 Identity = 344/346 (99.42%), Postives = 345/346 (99.71%), Query Frame = 0
Query: 1 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPT 346
MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYL GP+
Sbjct: 1 MSRRPAALITPPSASSGHILPHIYHPCPWRRVRMLSTRRAGLGGLSTMFLFNTVRAFLALPSSICPPTSQPYIPSIRSRSMGSAIVSMPRPTSTPSSTPAHTIKMATSSPSTPNPAPPAGIQATTRPRSDTIDPSAYIAPSVGLPTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYL-GPS 345
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|1200561428|gb|OUW72662.1| (hypothetical protein CBD70_00895 [Actinobacteria bacterium TMED210]) HSP 1 Score: 229.18 bits (583), Expect = 2.691e-68 Identity = 112/257 (43.58%), Postives = 164/257 (63.81%), Query Frame = 0
Query: 147 TVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRR--DKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAWN 401
+SPS FKTCP+ ++F +++K+ EP +EV +G+ VH AL++LF P E R+ E LH++FR W K R D++ +LF S E++R +G+ GLKLL+NY+ +E P PL RE +R D ++ GILDR+D GE ++VDYK+GKAP KY + +FF LK+YALL+++ P LKLIYL T+ ++++ EDL E+K E+L +WE I A++ D FPA LC+WC +K ICP +N
Sbjct: 4 NLSPSRASQFKTCPKQFKFANVDKLKEPTNEVQAKGTTVHQALEDLFDLPKEDRNXEKLHNLFREAWTKVRGTDEHHDLFSSVEEEREWGVDGLKLLNNYMTIEDPTSFNPLERERWVRGSIED-LNLRGILDRMD-RNEKGELIIVDYKSGKAPMAKYKEP--------RFFALKLYALLIKEELGEMPAELKLIYLKNSTIHTLKINEEDLIESKKEILEIWENIKKAYENDDFPAIKNTLCDWCYYKPICPVFN 250
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|1082232830|gb|OFW53503.1| (hypothetical protein A2V75_08180 [Actinobacteria bacterium RBG_16_70_17]) HSP 1 Score: 216.853 bits (551), Expect = 3.273e-64 Identity = 114/260 (43.85%), Postives = 156/260 (60.00%), Query Frame = 0
Query: 147 TVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRR-DKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAWNFTRE 405
T+SPS GDFK CP+L+RFR ++++PEPP+ RG+ H AL LF P +R+ E L+D+FR W++ R +Y +LF S E++RA+G+ L++L+NY VE P+ +PL RE + DG ++ GILDR++ P G + DYKTGKAP ER FF LK YALL+ + R P L+LIYL+GP V + + L +L LW I A + D FP PG LC+WCSFK ICPAW +E
Sbjct: 5 TLSPSRAGDFKHCPQLFRFRAIDRLPEPPTTYQARGTTSHLALQRLFDLPASQRTPEALYDLFRRAWVEVRGTEYPDLFTSVEEERAWGLESLQILANYFAVEDPSTFDPLAREMDLLEDL-DGITIRGILDRMENTP-DGRLAISDYKTGKAPP--------ERYALPAFFALKTYALLVRRRTGRAPDLLRLIYLNGPVVYQLEVNPAQLDAMDRQLRALWAAIERAMERDEFPPRPGPLCDWCSFKDICPAWTGAQE 254
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|1200575562|gb|OUW86072.1| (hypothetical protein CBD81_00675 [bacterium TMED221]) HSP 1 Score: 212.616 bits (540), Expect = 6.215e-62 Identity = 110/258 (42.64%), Postives = 161/258 (62.40%), Query Frame = 0
Query: 147 TVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRR--DKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLC-EWCSFKSICPAWN 401
+SPS FKTCP+ ++F +++KI EP + V +G+ VH AL++L+ P ++R+ EVL+D+FR W R D+++ LF S ED+R +G GL LL NYLK+E P + EPL +E +R D ++ GILDR+D E G ++VDYK+GKAP KY + +FF LK+YALL+ TP LKLIYL T+ ++++ L E K E+L +W+ I A++ + FPAT LC +WC +K ICP +N
Sbjct: 4 NLSPSRASQFKTCPKQFKFSNVDKIKEPTNLVQAKGTTVHQALEDLYDLPIDQRTPEVLYDLFRKAWSNVRGNDEHVNLFDSIEDEREWGQEGLNLLHNYLKLEDPQKLEPLEQERWVRGSIED-LNLRGILDRMD-EDKDGNLIIVDYKSGKAPMAKYKEP--------RFFALKLYALLIRDEIGVTPKELKLIYLKNSTIHTLKIDDTMLDEAKVEILSIWQDIKNAFENNEFPATKNALCKDWCYYKPICPLFN 251
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|1082263851|gb|OFW67348.1| (hypothetical protein A2Z12_06495 [Actinobacteria bacterium RBG_16_68_21]) HSP 1 Score: 206.068 bits (523), Expect = 3.876e-60 Identity = 109/256 (42.58%), Postives = 152/256 (59.38%), Query Frame = 0
Query: 147 TVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRRDKYLE-LFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAWN 401
T+SPS DFK CP+L++FR ++++PEP + RG+ H AL LF P E+R+ + L+D+FR W + R E LF S ED+RA+G+ L+LL+NY +E P +PL RE M DG + GILDR++ P G V+ DYKTGKAP +Y+ FF LK+YALL+ + RTP +KL+YL+GPTV + + L +L LW+ I A D FP +LC+WCSF+ ICPA+
Sbjct: 5 TLSPSRASDFKHCPQLFKFRAIDRLPEPATVYQARGTTAHLALQRLFDLPAEQRTPDTLYDLFRQAWAEIRGIEFEGLFSSVEDERAWGLESLELLANYFSIEDPTSFDPLDRELDMLEDL-DGIIIRGILDRMEEAP-DGSLVITDYKTGKAPPERYALPA--------FFALKIYALLIRRRTGRTPAEIKLMYLNGPTVYRIAVNDAQLDAMDRQLRALWDAIDRAIGEDRFPPRVSRLCDWCSFQEICPAFT 250
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|1200596495|gb|OUX06068.1| (hypothetical protein CBE04_02620 [Actinobacteria bacterium TMED244]) HSP 1 Score: 205.682 bits (522), Expect = 3.791e-59 Identity = 107/256 (41.80%), Postives = 158/256 (61.72%), Query Frame = 0
Query: 149 SPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVWLKRR--DKYLELFPSTEDQRAFGMAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLC-EWCSFKSICPAWN 401
SPS F TCP+ ++F +++KI EP + V +G+ VH A ++L+S P E+R+ + L+++FR W R D+++ LF S E++R +G GL LL NYLK+E P EPL +E +R D ++ GILDR+D E G V+VDYK+GK+P KY + +FF LK+YALL+ TP LKLIYL T+ ++++ L E K E+L +WE I A++ ++FPAT LC +WC +K ICP +N
Sbjct: 6 SPSRASQFXTCPKQFKFSNVDKIKEPTNLVQAKGTTVHQAXEDLYSLPSEERTSDTLYNLFRKAWSNVRGNDEHVNLFNSIEEEREWGQEGLNLLHNYLKLENPKTLEPLEQERWVRGSIED-LNLRGILDRMD-EDKDGNLVIVDYKSGKSPLAKYKEP--------RFFALKLYALLIRDELGVTPVELKLIYLKNSTIHTLKVTDAMLDEAKVEILKIWEDIKKAFEENNFPATKNNLCKDWCYYKPICPLFN 251
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|1175472322|ref|WP_082015129.1| (recombinase RecB [Streptacidiphilus jiangxiensis] >gi|1095383700|emb|SEM54387.1| putative RecB family exonuclease [Streptacidiphilus jiangxiensis]) HSP 1 Score: 177.563 bits (449), Expect = 2.019e-48 Identity = 100/269 (37.17%), Postives = 151/269 (56.13%), Query Frame = 0
Query: 145 PTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVW---LKRRDKYLELFP-----STEDQRAFGMAGL-KLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYL-DGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAWNFT 403
P ++SPS DF TCP LYR R ++K+PEPPS RG+++H L+ LF P R+ + + R W L+ R + ELFP + ++ A +AG +LL++Y ++E P +P RE + G ++ G +DR+DV P +GE VVDYKTG+AP+ + FQ+K YAL++ + + P RL+L+YL G V++ DL T+ +L LW+ I A + +PA P +LC+WC+ KS+CPAW T
Sbjct: 51 PVSLSPSRASDFMTCPLLYRLRVIDKLPEPPSPAATRGTLIHSVLERLFDAPQGSRTPDAAKALLRPQWERLLEERPEVAELFPAEAGGTDAEELASWLAGAEQLLASYFRIEDPNRLQPAERELLVTTELESGLTLRGYVDRIDVAP-TGEVRVVDYKTGRAPSRDFE--------GKAMFQMKFYALVIWRERGVLPKRLQLMYLGGGGQVVTYDPDEGDLLATERKLQALWQAIQRALETGEWPANPNRLCDWCAHKSLCPAWGGT 310
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|1181422725|ref|WP_084718280.1| (recombinase RecB [Streptacidiphilus carbonis]) HSP 1 Score: 176.022 bits (445), Expect = 2.568e-48 Identity = 104/265 (39.25%), Postives = 148/265 (55.85%), Query Frame = 0
Query: 148 VSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVW---LKRRDKYLELFPSTEDQRAFGMAGL-----KLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYL-DGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAWNFT 403
+SPS GDF TCP LYR R ++K+PEPPS RG++VH L+ LF P +R+ E + R W L +R + ELFP +D G+AG KL+ + ++E P EP RE + G + G +DRVDV P +GE VVDYKTG+AP+ + FQ+K YAL+L +++ P RL+L+YL G V++ DL + +L LWE I A ++ +PA +LC+WCSF+S+CPA+ T
Sbjct: 20 LSPSRAGDFMTCPLLYRLRVIDKVPEPPSAAATRGTLVHAVLERLFDAPAVQRTPEAARALLRPEWERLLAQRPELGELFP--DDADGSGLAGWLADAEKLVEGWFRLEDPTRLEPAERELYVETELESGLRLRGYIDRVDVAP-TGEVRVVDYKTGRAPSRDFE--------GKAMFQMKFYALVLWRLRGVVPRRLQLVYLGGGGQVVTYDPDPADLRAVERKLHALWEAIQRALESGEWPANRNRLCDWCSFQSLCPAFGGT 273
BLAST of EWM29569.1 vs. NCBI_GenBank
Match: gi|663224134|ref|WP_030260884.1| (recombinase RecB [Streptacidiphilus jeojiense]) HSP 1 Score: 176.022 bits (445), Expect = 3.585e-48 Identity = 101/266 (37.97%), Postives = 144/266 (54.14%), Query Frame = 0
Query: 145 PTTVSPSSLGDFKTCPRLYRFRHLEKIPEPPSEVMVRGSMVHDALDELFSQPPEKRSKEVLHDIFRAVW---LKRRDKYLELFPSTEDQRAFG---MAGLKLLSNYLKVETPAEQEPLMREFRMRVPFPDGPSVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYL-DGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAWNFT 403
P +SPS GDF TCP LYR R ++K+PEPPS RG++VH L+ LF P +R+ E + R W L++R + LFP D KL+ + ++E P EP RE + G + G +DRVDV P +GE VVDYKTG+AP+ + FQ+K YAL+L +++ P RL+L+YL G V++ DL + +LL LW+ I A + +PA +LC+WCSF+S+CPA+ T
Sbjct: 16 PVALSPSRAGDFMTCPLLYRLRVIDKVPEPPSAAATRGTVVHAVLERLFDAPAAQRTPEAARALLRPEWERLLEKRPELGTLFPDDADGSELAGWLADAEKLVDGWFRLEDPTRLEPAERELYVETQLESGLRLRGYIDRVDVAP-TGEVRVVDYKTGRAPSRDFE--------GKAMFQMKFYALVLWRLRGVVPRRLQLVYLGGGGQVVTYDPDPADLRAVERKLLALWQAIQRALETGEWPANRNRLCDWCSFQSLCPAFGGT 272 The following BLAST results are available for this feature:
BLAST of EWM29569.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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