EWM29529.1, cds1132 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|585112100|gb|EWM29529.1| (hypothetical protein Naga_100006g33 [Nannochloropsis gaditana]) HSP 1 Score: 1418.68 bits (3671), Expect = 0.000e+0 Identity = 691/691 (100.00%), Postives = 691/691 (100.00%), Query Frame = 0
Query: 1 MQEATGAHLEEPELQDNHNNLNSVGHFLGHDGDGSAIKTQGVRTRGSSYMLRERSTPSYLHASRQEGVEGVGACGDQADGQGVSDRQTRSRSRQKPASFAVHGTHAVVDEEHSSGSIDMGSLEESTVGSRRGNCEVEGCGRKSRGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVHGRMLDSFRQQSRREVEQGLHPVTCMHVDSMHSIQCMEPALMSAGLPFFCPTHLILARCGGSVDCRGNSYVRGRCVRHAGGDSSGAECQQPGCTRDALGGEGHGFCEKHRDLGFFCTHTFCVARAKCHGGKCDMHRLMESDMKEAAMIVEGSGPREGDDQVAPGPDNEGGNGKDEGGGRSAAREVRGEKGDMGSLQYSSACVSNTAVHGQSGGEGVWTATRPEAHSHLIQEETGVAKGQGDGMSAWDDVSGEEGAQIVESGEDEVKNVEDMMFRRREACMQEDFDTDSFFSSEARDGTAVDGSGERDSEASTVLYFGGVSRETLFRPSCACASVLSPSSAILADSPPPGSPSLEQTDEFFPSESFAHWHTSVREAIMLARVGSLGGKNEVNYHTMHRNIFPYAFAIHRYCVHTRLNRRLMLIFGQRMQKPCNLVMHFNWNA 691
MQEATGAHLEEPELQDNHNNLNSVGHFLGHDGDGSAIKTQGVRTRGSSYMLRERSTPSYLHASRQEGVEGVGACGDQADGQGVSDRQTRSRSRQKPASFAVHGTHAVVDEEHSSGSIDMGSLEESTVGSRRGNCEVEGCGRKSRGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVHGRMLDSFRQQSRREVEQGLHPVTCMHVDSMHSIQCMEPALMSAGLPFFCPTHLILARCGGSVDCRGNSYVRGRCVRHAGGDSSGAECQQPGCTRDALGGEGHGFCEKHRDLGFFCTHTFCVARAKCHGGKCDMHRLMESDMKEAAMIVEGSGPREGDDQVAPGPDNEGGNGKDEGGGRSAAREVRGEKGDMGSLQYSSACVSNTAVHGQSGGEGVWTATRPEAHSHLIQEETGVAKGQGDGMSAWDDVSGEEGAQIVESGEDEVKNVEDMMFRRREACMQEDFDTDSFFSSEARDGTAVDGSGERDSEASTVLYFGGVSRETLFRPSCACASVLSPSSAILADSPPPGSPSLEQTDEFFPSESFAHWHTSVREAIMLARVGSLGGKNEVNYHTMHRNIFPYAFAIHRYCVHTRLNRRLMLIFGQRMQKPCNLVMHFNWNA
Sbjct: 1 MQEATGAHLEEPELQDNHNNLNSVGHFLGHDGDGSAIKTQGVRTRGSSYMLRERSTPSYLHASRQEGVEGVGACGDQADGQGVSDRQTRSRSRQKPASFAVHGTHAVVDEEHSSGSIDMGSLEESTVGSRRGNCEVEGCGRKSRGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVHGRMLDSFRQQSRREVEQGLHPVTCMHVDSMHSIQCMEPALMSAGLPFFCPTHLILARCGGSVDCRGNSYVRGRCVRHAGGDSSGAECQQPGCTRDALGGEGHGFCEKHRDLGFFCTHTFCVARAKCHGGKCDMHRLMESDMKEAAMIVEGSGPREGDDQVAPGPDNEGGNGKDEGGGRSAAREVRGEKGDMGSLQYSSACVSNTAVHGQSGGEGVWTATRPEAHSHLIQEETGVAKGQGDGMSAWDDVSGEEGAQIVESGEDEVKNVEDMMFRRREACMQEDFDTDSFFSSEARDGTAVDGSGERDSEASTVLYFGGVSRETLFRPSCACASVLSPSSAILADSPPPGSPSLEQTDEFFPSESFAHWHTSVREAIMLARVGSLGGKNEVNYHTMHRNIFPYAFAIHRYCVHTRLNRRLMLIFGQRMQKPCNLVMHFNWNA 691
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|585112943|gb|EWM30284.1| (hypothetical protein Naga_100003g26 [Nannochloropsis gaditana]) HSP 1 Score: 370.548 bits (950), Expect = 9.603e-116 Identity = 235/558 (42.11%), Postives = 295/558 (52.87%), Query Frame = 0
Query: 49 YMLRERSTPSYLHASRQEGVEGVGACGDQADGQGVSDRQTRSRSRQKPASFAVHGT--------HAVVDEEHSSGSIDMGSLEESTVGSRRGNCEVEGCGRKSRGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVHGRMLDSFRQQSRREVEQGLHPVTCMHVDSMHSIQCMEPALMSAGLPFFCPTHLILARCGGSVDCRGNSYVRGRCVRHAGGDSSGAECQQPGCTRDALGGEGHGFCEKHRDLGFFCTHTFCVARAK--CHGGKCDMHRLMESDMKEAAMIVEGSGPREGDDQVAPGPDN-----EGGNGKDEGGGRSAAREVRGEKG--DMGSLQYSSACVSNTAVHGQSGGEGVWTATRPEAHSHLIQEETGVAKGQGDGMSAWDDVSGEEG-AQIVES--GEDEVK--NVEDMMFRRREACMQEDFDTDSFFSSEARDGTAVDGSGERDSEASTVLYFGGVSRETLFRPSCACASV 584
Y LRER TPSYL A GD AD + R R KP ++ H +V ++ S G G + V R G C GC +KSRGST RCRRHGGG C +PGCTGFSRL+GKCSVHGGAQMCIV CDKRARF+GRCTRHGGFVNCR +GC LRAVTKGVCAKHGG+ CRHPGC R +KS+ WCQ HGR+ D FR REVE+GL V C HVD +C+E AL S GLP +CP HLILA CG + C+ + +GRC RH + G E Q+P C+ A+G + G EK + H+ C + K G C +H ++M+ A +VEG P G Q D+ EGG G E R + R ++ G+ S VS+ GVW A PE + L+ EE V +G D +D+ G ++ ES G+ E+K V + + +E FD +SFF SE+R V E EA++ LYFGG+SR T C S
Sbjct: 103 YRLRERRTPSYLLAYSHSD-------GDDAD----HEVGGRPGERLKPCAWIDHRLPNNHTSRLQTLVGDDVSGGVGQNGDRPKRNVSKRGGTCTANGCMKKSRGSTGRCRRHGGGVNCKIPGCTGFSRLDGKCSVHGGAQMCIVPECDKRARFFGRCTRHGGFVNCRMEGCELRAVTKGVCAKHGGKSACRHPGCMRSGLKSRHGWCQGHGRIFDHFRLHHAREVERGLQQVACTHVDPRRGSRCVETALTSRGLPLYCPAHLILAHCGAGIGCKAPCHAKGRCARHLREGADGTESQRPVCSSTAVGEDREGLSEKFQGWITINNHSSCASCVKYPVAAGGCSIHPQTAAEMEGVANLVEGEEPAAGQSQALWQHDDQAGVKEGGQGALE---RISLETPRAQESGPSTGTFAGSPMPVSDLL------STGVWAAPEPEGLACLVLEEHVVTEGM-DSREWCEDMDHRNGRSERAESDTGDAELKGGRVRGYVAANGDLVKREHFDAESFFFSESRHAQVVGAKDEERLEATSSLYFGGISRCTPLYAPCPSTST 639
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|635365737|emb|CCI45906.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 100.138 bits (248), Expect = 3.157e-20 Identity = 60/143 (41.96%), Postives = 74/143 (51.75%), Query Frame = 0
Query: 121 SLEESTVGSRRGN------CEVEGCGRK--SRGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVHGRML 255
S ES SR G C V GC R SRG C RHGGG C V GCT +++ G+C HGG+ CI++GC KR + G C HGG C+ C AV+ G C HGG C C RPA + +N+CQ H +L
Sbjct: 80 STTESNTESRYGRKRHARRCSVVGCNRYKISRG---HCFRHGGGTPCEVVGCTSSAKIRGRCWRHGGSSACIIVGCTKRGKSRGLCWSHGGGTKCKTAECSKVAVSNGFCWAHGGGKRCLFETCKRPAYQRTQNYCQTHYELL 219
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|325183781|emb|CCA18240.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 99.3673 bits (246), Expect = 7.977e-20 Identity = 56/130 (43.08%), Postives = 71/130 (54.62%), Query Frame = 0
Query: 134 CEVEGCGRK--SRGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVHGRMLDSFRQQ 261
C V GC R SRG C RHGGG C V GCT +++ G+C HGG+ CI+ GC KR + G C HGG C+ C AV+ G C HGG CR C RPA + +N+CQ H L + ++Q
Sbjct: 98 CSVIGCNRYKISRG---HCFRHGGGTPCEVAGCTSSAKIRGRCWRHGGSSACIIAGCTKRGKSRGLCWSHGGGTKCKTIECGKVAVSNGFCWAHGGGKRCRFQTCKRPAYQRTQNYCQTHYESLYTPQEQ 224
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|695459228|ref|XP_009537672.1| (hypothetical protein PHYSODRAFT_565788 [Phytophthora sojae] >gi|348667082|gb|EGZ06908.1| hypothetical protein PHYSODRAFT_565788 [Phytophthora sojae]) HSP 1 Score: 93.9745 bits (232), Expect = 2.031e-18 Identity = 64/163 (39.26%), Postives = 79/163 (48.47%), Query Frame = 0
Query: 96 PASFAVHGTHAVVDEEHSSGSIDMGSLEESTVGSRRGNCEVEGCGRKSRGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVHGRMLDSF 258
P V A V SSGS S EE RR C+ EGC R C RHGGG CT+ GC+ ++ G C HGG+ C GCDK+A+ GRC HGG CR C AV+ G C HGG C + GC +PA + N C++H L +
Sbjct: 33 PFILNVPAAAASVGAISSSGSATQLSKEEK---KRRRTCKHEGC-RNYIVHKGLCCRHGGGKKCTLEGCSTSAKHRGLCWKHGGSVKCREHGCDKKAKARGRCWAHGGGTKCRNSECSKVAVSGGYCWAHGGGKRCGYDGCVKPAYERTGNLCEMHFEQLSTV 191
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|673025916|ref|XP_008866919.1| (hypothetical protein H310_04370 [Aphanomyces invadans] >gi|574476966|gb|ETW03963.1| hypothetical protein H310_04370 [Aphanomyces invadans]) HSP 1 Score: 92.4337 bits (228), Expect = 6.576e-18 Identity = 53/129 (41.09%), Postives = 68/129 (52.71%), Query Frame = 0
Query: 126 TVGSRRGNCEVEGCGRKSRGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVHGRM 254
T + R C V+GC + S RC RHGGG C+V GCT ++ +C +HGG +C + GC +A+ YGRC HGG V C C A G+C HGG CR GC R A K Q +C H +
Sbjct: 62 TSTTHRNKCNVDGCATAAV-SKGRCVRHGGGTRCSVAGCTKRTKRFNRCYLHGGFVLCCIEGCTSKAKRYGRCWAHGGGVQCTEVECTKLAAKGGLCWSHGGGHRCRASGCERRAYKRQHFYCDEHADL 189
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|695459187|ref|XP_009537659.1| (hypothetical protein PHYSODRAFT_341067 [Phytophthora sojae] >gi|348667069|gb|EGZ06895.1| hypothetical protein PHYSODRAFT_341067 [Phytophthora sojae]) HSP 1 Score: 93.5893 bits (231), Expect = 1.044e-17 Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 0
Query: 133 NCEVEGCGRKS--RGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVH 251
+C VEGC + RG C RHGGG C+ PGCT ++ G C HGG+ +C V GC + A+ G C HGG C GC ++KG+C HGG C GC RPA +S++N+C H
Sbjct: 111 SCCVEGCTNYTIDRG---LCFRHGGGKSCSKPGCTASAKHRGLCWKHGGSTLCTVEGCTRGAKSRGLCWSHGGGTKCSVAGCQKTTISKGLCWTHGGGKRCAFEGCKRPASQSKQNFCSKH 228
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|1214676078|gb|OWY97461.1| (hypothetical protein PHMEG_00031998 [Phytophthora megakarya]) HSP 1 Score: 92.4337 bits (228), Expect = 1.340e-17 Identity = 50/121 (41.32%), Postives = 69/121 (57.02%), Query Frame = 0
Query: 133 NCEVEGCGRKS--RGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVH 251
+C +EGC + RG C RHGGG C++PGCT ++ G C HGG+ +C V GC + A+ G C HGG C C ++KG+C HGG+ C GC RPA +S++N+C H
Sbjct: 94 SCSIEGCSNYTIDRG---LCFRHGGGKSCSMPGCTASAKHRGLCWKHGGSTLCTVEGCTRGAKSRGLCWSHGGGTKCSVANCQKTTISKGLCWTHGGKR-CGFDGCKRPASQSKQNYCSKH 210
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|567963152|gb|ETK88657.1| (hypothetical protein L915_07124 [Phytophthora parasitica] >gi|570987842|gb|ETP46441.1| hypothetical protein F442_07318 [Phytophthora parasitica P10297]) HSP 1 Score: 92.4337 bits (228), Expect = 1.604e-17 Identity = 51/121 (42.15%), Postives = 67/121 (55.37%), Query Frame = 0
Query: 133 NCEVEGCGRKS--RGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVH 251
C VEGC + RG C RHGGG C++PGCT ++ G C HGG+ +C V GC + A+ G C HGG C C ++KG+C HGG C GC RPA +S++N+C H
Sbjct: 96 QCCVEGCTNYTIDRG---LCFRHGGGKSCSMPGCTASAKHRGLCWKHGGSTLCTVEGCTRGAKSRGLCWSHGGGTKCSVTNCQKTTISKGLCWTHGGGKRCAFDGCKRPASQSKQNFCTKH 213
BLAST of EWM29529.1 vs. NCBI_GenBank
Match: gi|970645968|gb|KUF86282.1| (hypothetical protein AM588_10001112 [Phytophthora nicotianae]) HSP 1 Score: 91.6633 bits (226), Expect = 1.793e-17 Identity = 51/121 (42.15%), Postives = 67/121 (55.37%), Query Frame = 0
Query: 133 NCEVEGCGRKS--RGSTRRCRRHGGGAMCTVPGCTGFSRLEGKCSVHGGAQMCIVMGCDKRARFYGRCTRHGGFVNCRFQGCLLRAVTKGVCAKHGGRDPCRHPGCARPAIKSQENWCQVH 251
C VEGC + RG C RHGGG C++PGCT ++ G C HGG+ +C V GC + A+ G C HGG C C ++KG+C HGG C GC RPA +S++N+C H
Sbjct: 73 QCCVEGCTNYTIDRG---LCFRHGGGKSCSMPGCTASAKHRGLCWKHGGSTLCTVEGCTRGAKSRGLCWSHGGGTKCSVTNCQKTTISKGLCWTHGGGKRCAFDGCKRPASQSKQNFCTKH 190 The following BLAST results are available for this feature:
BLAST of EWM29529.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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