EWM29561.1, cds1131 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|585112132|gb|EWM29561.1| (glutaredoxin [Nannochloropsis gaditana]) HSP 1 Score: 491.5 bits (1264), Expect = 6.191e-176 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query: 1 MPQRTRRFSSRMQDFLMRLDGMLGKESSAKRSMMGCFLHILTQQQNEKFKHWRTTQNLGQDLQYFTLTANSRFTPGHICSNTIELHWPPCMGNLLGGTAVAATAEAMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGALKHDMEKRAFNSLNPCPVICHTLLLVPFS 234
MPQRTRRFSSRMQDFLMRLDGMLGKESSAKRSMMGCFLHILTQQQNEKFKHWRTTQNLGQDLQYFTLTANSRFTPGHICSNTIELHWPPCMGNLLGGTAVAATAEAMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGALKHDMEKRAFNSLNPCPVICHTLLLVPFS
Sbjct: 1 MPQRTRRFSSRMQDFLMRLDGMLGKESSAKRSMMGCFLHILTQQQNEKFKHWRTTQNLGQDLQYFTLTANSRFTPGHICSNTIELHWPPCMGNLLGGTAVAATAEAMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGALKHDMEKRAFNSLNPCPVICHTLLLVPFS 234
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|1072990032|ref|XP_018445734.1| (PREDICTED: glutaredoxin-C4-like [Raphanus sativus]) HSP 1 Score: 117.087 bits (292), Expect = 9.842e-30 Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 0
Query: 100 VAATAEAMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGALKHDM 210
V+A+ EA +FVK T+ +HK+V+FSK+YCP+ AK V HVVELD+R DGG IQ+AL E+ GRRTVP VF+ GK IGG DDTV +G++ ++L G + ++
Sbjct: 23 VSASPEA-EFVKKTISSHKIVIFSKSYCPYCRRAKSVFSELNQVPHVVELDEREDGGSIQSALGEIVGRRTVPQVFINGKHIGGSDDTVDAHESGELAKLLGVSGNTRAEL 132
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|703122235|ref|XP_010102526.1| (hypothetical protein L484_014582 [Morus notabilis] >gi|587905428|gb|EXB93590.1| hypothetical protein L484_014582 [Morus notabilis]) HSP 1 Score: 116.701 bits (291), Expect = 1.085e-29 Identity = 55/104 (52.88%), Postives = 75/104 (72.12%), Query Frame = 0
Query: 106 AMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGALKHD 209
A++ VK + +H VVVFSKTYC + + K L GA F V+ELD+ SDGGD+QAALAE TGRRTVPNVF+ GK+IGG D + L ++G++ +L+ GA+ +D
Sbjct: 18 ALNKVKQIVSSHPVVVFSKTYCGYCTRVKNLLTQLGAAFKVIELDEESDGGDMQAALAEWTGRRTVPNVFIAGKNIGGCDSVLELHQSGQLLPLLTNAGAIAND 121
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|698799696|ref|XP_009832877.1| (glutaredoxin [Aphanomyces astaci] >gi|574112274|gb|ETV77767.1| glutaredoxin [Aphanomyces astaci]) HSP 1 Score: 115.931 bits (289), Expect = 1.387e-29 Identity = 59/106 (55.66%), Postives = 72/106 (67.92%), Query Frame = 0
Query: 104 AEAMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSD---GGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGAL 206
A + FVK + H VVVFSKT CP+ MAK L+S GA FHVVEL++ D G D+Q A ++TG+RTVPNVF+ G SIGGG DT AL R+GK+ ML GAL
Sbjct: 2 ATGLQFVKNAIAQHAVVVFSKTTCPYCVMAKEVLKSTGATFHVVELNRMGDEPTGDDVQNACFQLTGQRTVPNVFVSGTSIGGGSDTKALHRSGKLVPMLREAGAL 107
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|669155206|ref|XP_008613165.1| (glutaredoxin 3 [Saprolegnia diclina VS20] >gi|530735283|gb|EQC33525.1| glutaredoxin 3 [Saprolegnia diclina VS20]) HSP 1 Score: 115.546 bits (288), Expect = 1.902e-29 Identity = 59/105 (56.19%), Postives = 72/105 (68.57%), Query Frame = 0
Query: 105 EAMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSD---GGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGAL 206
+ FVK+ + H VVVFSKT CP+ MAK L S GA FHVVEL+Q D G D+Q A ++TG+RTVPNVF+ GKSIGGG DT AL +AGK+ +L GAL
Sbjct: 3 SGVQFVKSLISQHGVVVFSKTTCPYCRMAKDVLGSVGARFHVVELNQMGDEPTGDDVQNACFQLTGQRTVPNVFVNGKSIGGGSDTAALQKAGKLVPLLKTAGAL 107
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|813177613|ref|XP_012205276.1| (hypothetical protein SPRG_10650 [Saprolegnia parasitica CBS 223.65] >gi|641529802|gb|KDO23954.1| hypothetical protein SPRG_10650 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 115.161 bits (287), Expect = 2.141e-29 Identity = 59/105 (56.19%), Postives = 72/105 (68.57%), Query Frame = 0
Query: 105 EAMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSD---GGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGAL 206
+ FVK+ + H VVVFSKT CP+ MAK L S GA FHVVEL+Q D G D+Q A ++TG+RTVPNVF+ GKSIGGG DT AL +AGK+ +L GAL
Sbjct: 3 SGVQFVKSLISQHGVVVFSKTTCPYCRMAKDVLGSVGARFHVVELNQMGDAPTGDDVQNACFQLTGQRTVPNVFINGKSIGGGSDTAALQKAGKLVPLLKDAGAL 107
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|673037840|ref|XP_008872881.1| (glutaredoxin [Aphanomyces invadans] >gi|574471677|gb|ETV98684.1| glutaredoxin [Aphanomyces invadans]) HSP 1 Score: 115.161 bits (287), Expect = 3.370e-29 Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 0
Query: 101 AATAEAMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGAL 206
AT EA FV+ + + V +FSKTYCP+ MAK+TL S GA F V+EL++R DG IQ+ L E+TGR TVPNVF++ +IGGG D L R GK+ +ML G L
Sbjct: 8 GATPEAAAFVQQAINTNGVTIFSKTYCPYCDMAKKTLTSVGAQFEVIELNKRPDGDAIQSVLEELTGRDTVPNVFIKTTTIGGGTDVAKLHRDGKLVQMLKEAGVL 113
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|685375446|ref|XP_009120800.1| (PREDICTED: glutaredoxin-C4-like [Brassica rapa] >gi|923728608|ref|XP_013667303.1| PREDICTED: glutaredoxin-C4-like [Brassica napus]) HSP 1 Score: 115.161 bits (287), Expect = 4.447e-29 Identity = 51/93 (54.84%), Postives = 66/93 (70.97%), Query Frame = 0
Query: 108 DFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEML 200
DFVK T+ +HK+V+FSK+YCP+ AK V HVVELD+R DGG IQ+AL E+ GRRTVP VF+ GK IGG DDTV +G++ ++L
Sbjct: 30 DFVKKTISSHKIVIFSKSYCPYCRRAKSVFSELNQVPHVVELDEREDGGSIQSALGEIVGRRTVPQVFINGKHIGGSDDTVDAHESGELAKLL 122
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|698798560|ref|XP_009832309.1| (glutaredoxin [Aphanomyces astaci] >gi|574112480|gb|ETV77972.1| glutaredoxin [Aphanomyces astaci]) HSP 1 Score: 114.775 bits (286), Expect = 4.707e-29 Identity = 55/104 (52.88%), Postives = 70/104 (67.31%), Query Frame = 0
Query: 103 TAEAMDFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGAL 206
T EA FV+T + + V VFSKTYCP+ AK L+S GA F V+ELD+R DG IQ+AL E+TGR TVPNVF++ +IGGG D L R GK+ ++L G L
Sbjct: 10 TPEAAAFVQTAINTNGVTVFSKTYCPYCDQAKTALKSAGATFEVIELDKRPDGDAIQSALGELTGRFTVPNVFVKTTTIGGGSDVAKLHREGKLVQLLKEAGVL 113
BLAST of EWM29561.1 vs. NCBI_GenBank
Match: gi|674940945|emb|CDX92459.1| (BnaA10g14980D [Brassica napus]) HSP 1 Score: 115.161 bits (287), Expect = 5.205e-29 Identity = 51/93 (54.84%), Postives = 66/93 (70.97%), Query Frame = 0
Query: 108 DFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEML 200
DFVK T+ +HK+V+FSK+YCP+ AK V HVVELD+R DGG IQ+AL E+ GRRTVP VF+ GK IGG DDTV +G++ ++L
Sbjct: 28 DFVKKTISSHKIVIFSKSYCPYCRRAKSVFSELNQVPHVVELDEREDGGSIQSALGEIVGRRTVPQVFINGKHIGGSDDTVDAHESGELAKLL 120 The following BLAST results are available for this feature:
BLAST of EWM29561.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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