EWM30577.1, cds111 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|585113244|gb|EWM30577.1| (pyrroline-5-carboxylate reductase [Nannochloropsis gaditana]) HSP 1 Score: 651.358 bits (1679), Expect = 0.000e+0 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0 Query: 1 MSEAPTRQAPSSSTASSTNASPPHPQHAKPGPLRPAGGAKSGEGEKKFTVGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAESSKPTPNPRQT 324 MSEAPTRQAPSSSTASSTNASPPHPQHAKPGPLRPAGGAKSGEGEKKFTVGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAESSKPTPNPRQT Sbjct: 1 MSEAPTRQAPSSSTASSTNASPPHPQHAKPGPLRPAGGAKSGEGEKKFTVGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAESSKPTPNPRQT 324
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|488723558|ref|WP_002647263.1| (pyrroline-5-carboxylate reductase [Gimesia maris] >gi|148844171|gb|EDL58525.1| pyrroline-5-carboxylate reductase [Gimesia maris DSM 8797]) HSP 1 Score: 295.819 bits (756), Expect = 1.533e-96 Identity = 151/264 (57.20%), Postives = 186/264 (70.45%), Query Frame = 0 Query: 50 VGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAE 313 VGFIG G MA+AL GL+ +G + SD Y+ +K A E G + N QV+E A++I+L+VKP IP VL+E+ VT HL+ISIAAG L L L + TR++RVMPNTPCLV + A+AFA GG EDA LV+ + S VG AFEV E L+AVTGLSGSGPAY++ +IEA++DGGVR GLPR +A QLAAQTVKGAA MV TGEHPG LKD V SPGGTTI GI ALE GGLR++++ AV AA RS +L + Sbjct: 9 VGFIGAGRMATALAGGLISSGFTTKDHVCASDTYEAASEKFAQETGARSVSSNQQVMEQAEIIILSVKPQQIPDVLQEIKSSVTSQHLLISIAAGCPLSLFLDTLGEFTRMIRVMPNTPCLVKQGASAFARGGQASTEDATLVESLLSTVGIAFEVPESQLDAVTGLSGSGPAYIYQVIEALSDGGVRVGLPRQIATQLAAQTVKGAAEMVLQTGEHPGTLKDAVTSPGGTTIAGIHALEAGGLRNSLMNAVSAATSRSIELGQ 272
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|971517324|dbj|GAQ80892.1| (pyrroline-5-carboxylate reductase [Klebsormidium nitens]) HSP 1 Score: 295.819 bits (756), Expect = 5.739e-95 Identity = 155/271 (57.20%), Postives = 193/271 (71.22%), Query Frame = 0 Query: 43 EGEKKFTVGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAE 313 E VGFIG G MA A+ RG KAGVVP +DP + R+ ++ GV A N++V E + VI LAVKP ++ +VL EL +T HLI+SIAAG TL+ ++ R+VRVMPNTPCLVGE AAA +LG D LV+++FSAVG V E L+AVTGLSGSGPAY+F+ IEA+ADGGV AGLPR++A+ LAAQTVKGAA MV TG+HPGVLKD VASPGGTTI G+ LEKGG+RST+I AV+AAA+RSK+L++ Sbjct: 116 ESSLDVNVGFIGAGQMAEAMARGFSKAGVVPASQQFATDPSEARREVFSS-FGVTALQSNVEVAEKSDVIFLAVKPYVVKKVLEELQTTLTERHLIVSIAAGVTLEQLQAAAGKGARIVRVMPNTPCLVGETAAALSLGKHATEADGELVQKLFSAVGLVHVVPENLLDAVTGLSGSGPAYIFIAIEALADGGVAAGLPRDIALSLAAQTVKGAAEMVLQTGKHPGVLKDSVASPGGTTIAGLHELEKGGVRSTLINAVLAAAQRSKELSK 385
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|470477115|ref|XP_004342330.1| (pyrroline5-carboxylate reductase [Acanthamoeba castellanii str. Neff] >gi|440799159|gb|ELR20220.1| pyrroline5-carboxylate reductase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 286.189 bits (731), Expect = 7.452e-93 Identity = 151/268 (56.34%), Postives = 190/268 (70.90%), Query Frame = 0 Query: 50 VGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVG--VIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRH-HLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAES 314 + F+G G MA+AL RG + A V I SD Y+P + + G N++ +E++ V++L+VKP ++ +L+E+ V HLIISIAAG T+ + QL TRVVRVMPNTPCLVG+ AAAF+LGG PED LV + S+VG EV E+ L+AVTGLSGSGPAYV+ IEA++DGGV AGLPR+VA +LAAQTV GAA MV TGEHPGVLKD+VASPGGTTI GI ALE G LR+TV+ AV+AA ERSK+LA+S Sbjct: 6 IAFLGAGQMATALARGFIDANVTRPENIIASDAYEPQLPRFQKDTGGSTKTTKSNLEAVENSDVVILSVKPQVMSTLLKEIKDAVASSPHLIISIAAGITIDTITKQLGSDTRVVRVMPNTPCLVGKTAAAFSLGGKATPEDGKLVAHLLSSVGLGTEVPERLLDAVTGLSGSGPAYVYQFIEALSDGGVAAGLPRDVAAKLAAQTVLGAAQMVVQTGEHPGVLKDKVASPGGTTIAGIHALENGRLRATVMNAVLAATERSKELAKS 273
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|494658352|ref|WP_007416296.1| (pyrroline-5-carboxylate reductase [Pedosphaera parvula] >gi|223893159|gb|EEF59623.1| pyrroline-5-carboxylate reductase [bacterium Ellin514]) HSP 1 Score: 285.034 bits (728), Expect = 2.520e-92 Identity = 145/267 (54.31%), Postives = 187/267 (70.04%), Query Frame = 0 Query: 47 KFTVGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAE 313 K T+GF+G G M +AL +G ++AG+V I SDP + A EVG N++V A V++LAVKPD + VL E+ + T+ HLIISIAAG L +E LP +R +RVMPNTP +VG+ A A+A G S PED L +++FSAVG AF+VKE L+AVTGLSGSGPAYV+M+IEA++DGGV +GLPR++A +LAAQT+ G A MV TG HPG LKD V SPGGTTI G+ LEKG LR T++ AV AA E+SK+L + Sbjct: 4 KLTIGFLGAGKMGTALAKGFIQAGLVSAEQIIASDPIEAAGKSFAKEVGAKVTSSNVEVARFANVLLLAVKPDQVSGVLAEIRDQFTKDHLIISIAAGVPLAKIEAGLPANSRAIRVMPNTPAIVGQSATAYAFGKSTTPEDGQLAQKLFSAVGVAFQVKEALLDAVTGLSGSGPAYVYMIIEALSDGGVASGLPRDIATKLAAQTLLGGAKMVLETGMHPGALKDMVTSPGGTTIEGVHELEKGQLRGTLMNAVRAATEKSKKLGQ 270
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|1134105926|ref|WP_076349134.1| (pyrroline-5-carboxylate reductase [Paludisphaera borealis]) HSP 1 Score: 283.878 bits (725), Expect = 1.204e-91 Identity = 149/262 (56.87%), Postives = 187/262 (71.37%), Query Frame = 0 Query: 51 GFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLA 312 GFIG G MASALIRG+++AGV +S SDP RD+LA E G+ A N ++E + V+VLAVKP + QVLREL+ VT HL++SIAAG ++ + L RVVRVMPNTP L+GE A+A+ALG + +DA +V+ +VG A V E L+AVTGLSGSGPA+V+M+IEA++DGGVRAGLPR+VA LAAQTV G+A MV T HPG LKDQV SPGGTTI G+ ALE+ G+R +I AV AAA RS +LA Sbjct: 22 GFIGAGKMASALIRGMIRAGVTTADLVSTSDPLASTRDELARETGITAAASNFAMVERSDVLVLAVKPQSMGQVLRELAAVVTPDHLVVSIAAGVSIATISDALGAGRRVVRVMPNTPALLGEGASAYALGPNATSDDAAVVQAFLDSVGRAVRVPESQLDAVTGLSGSGPAFVYMIIEALSDGGVRAGLPRDVATMLAAQTVLGSARMVLETNLHPGALKDQVTSPGGTTIAGLHALERAGVRGALIDAVQAAAHRSAELA 283
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|397574271|gb|EJK49118.1| (hypothetical protein THAOC_32036 [Thalassiosira oceanica]) HSP 1 Score: 282.337 bits (721), Expect = 3.235e-91 Identity = 156/264 (59.09%), Postives = 186/264 (70.45%), Query Frame = 0 Query: 49 TVGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQ-VIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQL 311 T+GF+G G MASAL G+V G+ I SD +KP R+K A+ G AY+ N V E+++ I LAVKP+ + +++ + LIISIAAG TL+ +E LP + RVVRVMPNTPCLVGE AA FALGG +D LVK + AVG A EV E LNA+TGLSGSGPAYVF IEA++DGGVRAGLPRNVA QLAAQTVKGAA MV TG+HPG LKD V SPGGTTI G+EALEKGG R+ I AV +A +RS QL Sbjct: 3 TLGFLGAGQMASALADGIVSNGLRKPNQIHCSDIWKPAREKAQAK-GYNAYELNSGVCENSEDAIFLAVKPNCVAAACKDVMESKDSGALIISIAAGVTLETLEDSLPGR-RVVRVMPNTPCLVGEQAAGFALGGLATDDDRRLVKELLDAVGVAMEVNEILLNAITGLSGSGPAYVFQFIEALSDGGVRAGLPRNVATQLAAQTVKGAAEMVLKTGKHPGELKDAVTSPGGTTIAGVEALEKGGFRAATISAVTSATKRSMQL 264
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|931371136|gb|KPJ62338.1| (hypothetical protein AMS15_04255 [Planctomycetes bacterium DG_23]) HSP 1 Score: 281.952 bits (720), Expect = 5.835e-91 Identity = 147/266 (55.26%), Postives = 190/266 (71.43%), Query Frame = 0 Query: 50 VGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAESS 315 +GFIG G M SALIRG +KAG V + D R+K+A E GV + DN +V ++A VI LAVKPD + +VLRE+ VT+ HL++SIAAG L+ +E QL + RV+RVMPNTP LVGE AAAF+LG + ED L++ I +G A +V E ++AVTGLSGSGPAY+F++IEA+A+GGV+AGLPR+++++LAAQT GAA MV TGEHP LKD VASPGGTTI G+ LEK G+R I AV AA +SK LA+S+ Sbjct: 6 IGFIGAGKMGSALIRGFIKAGTVDVQNVVACDSDATAREKIAKE-GVQVFSDNKEVAKNASVIFLAVKPDAVSKVLREIKDVVTQKHLVVSIAAGVRLEALEAQLEEGRRVIRVMPNTPALVGEMAAAFSLGKNATSEDGRLLQEILGVLGVAVQVDEGLMDAVTGLSGSGPAYIFLVIEALAEGGVKAGLPRDISLRLAAQTALGAAKMVLETGEHPERLKDMVASPGGTTIEGLAVLEKKGIRGAFIQAVEKAARKSKSLAKSA 270
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|1209200797|ref|WP_088259042.1| (pyrroline-5-carboxylate reductase [Fimbriiglobus ruber] >gi|1208006694|gb|OWK35957.1| Pyrroline-5-carboxylate reductase [Fimbriiglobus ruber]) HSP 1 Score: 278.485 bits (711), Expect = 7.752e-90 Identity = 142/266 (53.38%), Postives = 185/266 (69.55%), Query Frame = 0 Query: 48 FTVGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAE 313 +GF+G G MA+AL G AG++ SDPY RDK A+ G+ A N +V+ +V++LAVKP + VL EL+ T HL +SIAAG TL + L + RV+RVMPNTPCL+G A+ FA G + PED LV R+F AVG AF + E L+AVTGLSGSGPA+V++MIEA+ADGGVR GLPR+VA+ LAAQTV G+A MV TG+HPG LKD VASPGGTTI G+ ALE+GG+R+ ++ AV AA +R+++L + Sbjct: 5 LAIGFLGAGQMATALANGWTAAGLLDPARSLASDPYPAARDKFASATGIRAVAGNAEVVAGCEVVILAVKPQTMAAVLAELATVATDRHLFVSIAAGVTLGALSAGLGSKARVIRVMPNTPCLLGASASGFAAGPAATPEDVALVARLFGAVGKAFALPEHQLDAVTGLSGSGPAFVYVMIEALADGGVRVGLPRDVALALAAQTVLGSAKMVLETGQHPGALKDAVASPGGTTIAGLHALERGGVRAALMDAVEAATKRAQELGK 270
BLAST of EWM30577.1 vs. NCBI_GenBank
Match: gi|298714588|emb|CBJ27579.1| (delta-1-pyrroline-5-carboxylate reductase [Ectocarpus siliculosus]) HSP 1 Score: 278.485 bits (711), Expect = 1.010e-89 Identity = 154/267 (57.68%), Postives = 192/267 (71.91%), Query Frame = 0 Query: 50 VGFIGGGMMASALIRGLVKAGVVPNFAISVSDPYKPMRDKLAAEVGVIAYDDNIQVIEHAQVIVLAVKPDIIPQVLRELSQRVTRHHLIISIAAGATLQLMEHQLPDQTRVVRVMPNTPCLVGECAAAFALGGSCLPEDAVLVKRIFSAVGAAFEVKEKDLNAVTGLSGSGPAYVFMMIEAMADGGVRAGLPRNVAMQLAAQTVKGAATMVQLTGEHPGVLKDQVASPGGTTITGIEALEKGGLRSTVIGAVVAAAERSKQLAESSK 316 +GFIG GMM+SA+I G++ A V I SD Y+P D+L+A GV N +V+ A VIVLAVKPD+IP VL E+ Q +T L++SIAAG L +E+ +P + RV+RVMPNTPCLV E AAAF+LG ED LV+ + S+VG A EVKE L+AVTG+SGSGPAY+F++IEA+ADGGVR GLPR A++LAAQTVKGAATMV TG HPGVLKD V SPGGTTI +EALEK G R+ I AVVAA +S ++ + K Sbjct: 15 LGFIGAGMMSSAMINGIIAAKVTEPGNIIASDVYQPSLDRLSAS-GVRTSTTNKEVVTGADVIVLAVKPDVIPAVLTEIEQFLTDDSLVVSIAAGVPLSALENLVPGK-RVIRVMPNTPCLVSESAAAFSLGSHAKDEDRELVQSLLSSVGFACEVKESQLDAVTGVSGSGPAYIFVLIEALADGGVRMGLPRATALKLAAQTVKGAATMVLETGTHPGVLKDNVCSPGGTTICAVEALEKNGFRAAAISAVVAATNKSLEMRNTKK 279 The following BLAST results are available for this feature:
BLAST of EWM30577.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|