EWM29557.1, cds1104 (CDS) Nannochloropsis gaditana

Overview
NameEWM29557.1
Unique Namecds1104
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1199929..1202015 -
Alignment locationCM002456.1:1199548..1199786 -
Alignment locationCM002456.1:1198782..1199413 -

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Properties
Property NameValue
Protein idEWM29557.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100006g61.8646.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1199929..1202015 -
CM002456.1supercontigCM002456.1:1199548..1199786 -
CM002456.1supercontigCM002456.1:1198782..1199413 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN_domain-like
Homology
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BLAST of EWM29557.1 vs. NCBI_GenBank
Match: gi|585112128|gb|EWM29557.1| (hypothetical protein Naga_100006g61 [Nannochloropsis gaditana])

HSP 1 Score: 2000.71 bits (5182), Expect = 0.000e+0
Identity = 985/985 (100.00%), Postives = 985/985 (100.00%), Query Frame = 0 
Query:    1 MCSSQRAAPTGSGEGGDKSSSLHQHNHNHLTPTIGATPHGFGVEEDVDAADLPSGPADIRENELKERKSSETTLSDKSSGTTNDDTKERVGQSSKSVDAGIGEDVVAGSGSSSCSDSSRSSSSSSSGDTECPVPTGAAGALPHDLHLRPSHRSRAKLVIDGAYLEASLTAAGNGLGSQVDLLALLSLLEDRLEVSFEKKVLYQGTPGGQPNNFHRLIALVDGAHVAVHLQPLKSRTVTLDLGGGCKEDREILLDKGVDLALALEILEPLESERANASPTLSSSSLASAATSTSFSQPVLVVLTGDEDMCPVMERAERVGYSVVVCGGRKSLSEKLHPFVRKGAGQAIWLEDLLDHASALGSGACLNGHAPRGVSTSARHANAEASPATSVAPRTPLMVGEPAGTVGQGGGSSSIGSISGAGGYSHADGGLLNRGLRTASPAGPLLFKQQQQQQQQHQPQYDQVQQIQQQHAVSLQHHHRGGENASGTLVSPQVASAAAAAAAAATGLGGYQSLHPSIAASLALNGRNLPPSASASIGMGQNSSIGLGLNPKQKLYRCPQGRFCDKLDEPGHLRALRHPCPKGSICAVALSVCNPGALGASGVSDADRREHMLTFVHICPKGTACPRNDIEHCTHFDHPYRRTKARCPEGGMCPFIARGVGASNSSAREHSRLYRHPCPRGSTCPLLAGKQPSEKKRYHLMDYTHPCHVGCKYSVDKEWAWQHFSDFDHEEDLQLKHPQPLHSHQTRGGGLDTRTSTTADDEGSAASSQVLLSGWNSPGGTGVEGQAEGPLGGSLFSADFFQPFPPKASERAAAGPREGVEGAKNGPGLANLDQIADVLQQVTTGRMEQSAHPNRYHRPQHGHGYQRGQAHHARAHPHQAQQLQHYQQHHHHHPQYHQQPQRGYQPSPGILAPLRDPLAYQPHHLDQQHPHAYLQLQSVPGSRMAGSGGENEQSIAGGVVSSSGRMAHASASRPTQAMQSSWQPGA 985
            MCSSQRAAPTGSGEGGDKSSSLHQHNHNHLTPTIGATPHGFGVEEDVDAADLPSGPADIRENELKERKSSETTLSDKSSGTTNDDTKERVGQSSKSVDAGIGEDVVAGSGSSSCSDSSRSSSSSSSGDTECPVPTGAAGALPHDLHLRPSHRSRAKLVIDGAYLEASLTAAGNGLGSQVDLLALLSLLEDRLEVSFEKKVLYQGTPGGQPNNFHRLIALVDGAHVAVHLQPLKSRTVTLDLGGGCKEDREILLDKGVDLALALEILEPLESERANASPTLSSSSLASAATSTSFSQPVLVVLTGDEDMCPVMERAERVGYSVVVCGGRKSLSEKLHPFVRKGAGQAIWLEDLLDHASALGSGACLNGHAPRGVSTSARHANAEASPATSVAPRTPLMVGEPAGTVGQGGGSSSIGSISGAGGYSHADGGLLNRGLRTASPAGPLLFKQQQQQQQQHQPQYDQVQQIQQQHAVSLQHHHRGGENASGTLVSPQVASAAAAAAAAATGLGGYQSLHPSIAASLALNGRNLPPSASASIGMGQNSSIGLGLNPKQKLYRCPQGRFCDKLDEPGHLRALRHPCPKGSICAVALSVCNPGALGASGVSDADRREHMLTFVHICPKGTACPRNDIEHCTHFDHPYRRTKARCPEGGMCPFIARGVGASNSSAREHSRLYRHPCPRGSTCPLLAGKQPSEKKRYHLMDYTHPCHVGCKYSVDKEWAWQHFSDFDHEEDLQLKHPQPLHSHQTRGGGLDTRTSTTADDEGSAASSQVLLSGWNSPGGTGVEGQAEGPLGGSLFSADFFQPFPPKASERAAAGPREGVEGAKNGPGLANLDQIADVLQQVTTGRMEQSAHPNRYHRPQHGHGYQRGQAHHARAHPHQAQQLQHYQQHHHHHPQYHQQPQRGYQPSPGILAPLRDPLAYQPHHLDQQHPHAYLQLQSVPGSRMAGSGGENEQSIAGGVVSSSGRMAHASASRPTQAMQSSWQPGA
Sbjct:    1 MCSSQRAAPTGSGEGGDKSSSLHQHNHNHLTPTIGATPHGFGVEEDVDAADLPSGPADIRENELKERKSSETTLSDKSSGTTNDDTKERVGQSSKSVDAGIGEDVVAGSGSSSCSDSSRSSSSSSSGDTECPVPTGAAGALPHDLHLRPSHRSRAKLVIDGAYLEASLTAAGNGLGSQVDLLALLSLLEDRLEVSFEKKVLYQGTPGGQPNNFHRLIALVDGAHVAVHLQPLKSRTVTLDLGGGCKEDREILLDKGVDLALALEILEPLESERANASPTLSSSSLASAATSTSFSQPVLVVLTGDEDMCPVMERAERVGYSVVVCGGRKSLSEKLHPFVRKGAGQAIWLEDLLDHASALGSGACLNGHAPRGVSTSARHANAEASPATSVAPRTPLMVGEPAGTVGQGGGSSSIGSISGAGGYSHADGGLLNRGLRTASPAGPLLFKQQQQQQQQHQPQYDQVQQIQQQHAVSLQHHHRGGENASGTLVSPQVASAAAAAAAAATGLGGYQSLHPSIAASLALNGRNLPPSASASIGMGQNSSIGLGLNPKQKLYRCPQGRFCDKLDEPGHLRALRHPCPKGSICAVALSVCNPGALGASGVSDADRREHMLTFVHICPKGTACPRNDIEHCTHFDHPYRRTKARCPEGGMCPFIARGVGASNSSAREHSRLYRHPCPRGSTCPLLAGKQPSEKKRYHLMDYTHPCHVGCKYSVDKEWAWQHFSDFDHEEDLQLKHPQPLHSHQTRGGGLDTRTSTTADDEGSAASSQVLLSGWNSPGGTGVEGQAEGPLGGSLFSADFFQPFPPKASERAAAGPREGVEGAKNGPGLANLDQIADVLQQVTTGRMEQSAHPNRYHRPQHGHGYQRGQAHHARAHPHQAQQLQHYQQHHHHHPQYHQQPQRGYQPSPGILAPLRDPLAYQPHHLDQQHPHAYLQLQSVPGSRMAGSGGENEQSIAGGVVSSSGRMAHASASRPTQAMQSSWQPGA 985
The following BLAST results are available for this feature:
BLAST of EWM29557.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112128|gb|EWM29557.1|0.000e+0100.00hypothetical protein Naga_100006g61 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1105rna1105Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications