EWM29611.1, cds1071 (CDS) Nannochloropsis gaditana

Overview
NameEWM29611.1
Unique Namecds1071
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1127760..1127847 +
Alignment locationCM002456.1:1128003..1128370 +
Alignment locationCM002456.1:1128512..1128596 +
Alignment locationCM002456.1:1128748..1129184 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29611.1
Productspermidine synthase
Orig transcript idgnl|cribi|Naga_100006g94.8700.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1127760..1127847 +
CM002456.1supercontigCM002456.1:1128003..1128370 +
CM002456.1supercontigCM002456.1:1128512..1128596 +
CM002456.1supercontigCM002456.1:1128748..1129184 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR030374PABS
IPR030373PABS_CS
IPR029063SAM-dependent_MTases
IPR001045Spermi_synthase
Homology
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|585112182|gb|EWM29611.1| (spermidine synthase [Nannochloropsis gaditana])

HSP 1 Score: 676.396 bits (1744), Expect = 0.000e+0
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0
Query:    1 MAAGASDDRQELLNLIKDGWFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEARAQVKPRS 325
            MAAGASDDRQELLNLIKDGWFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEARAQVKPRS
Sbjct:    1 MAAGASDDRQELLNLIKDGWFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEARAQVKPRS 325          
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|553191250|ref|XP_005855348.1| (spermidine synthase, partial [Nannochloropsis gaditana CCMP526] >gi|422293723|gb|EKU21023.1| spermidine synthase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 616.69 bits (1589), Expect = 0.000e+0
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query:   29 TGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEARAQVKPRS 325
            TGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEARAQVKPRS
Sbjct:    1 TGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEARAQVKPRS 297          
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|1173959992|gb|OQS06162.1| (spermidine synthase [Thraustotheca clavata])

HSP 1 Score: 352.058 bits (902), Expect = 3.401e-118
Identity = 169/311 (54.34%), Postives = 216/311 (69.45%), Query Frame = 0
Query:    9 RQELLNLIKDGWFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHC-TYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 318
            R+ +  +    WF E ++ W GQ+F L  E+VLFH +S +QDVL+F+S +YG VLVLDGVIQ TERDE +YQEMISHLPL++H NP+ VLI+GGGDGGVLREVAKHPS++ I MCEID MV DVSK+F ++TLAT++ DPRLTL+ DDAA ++ ++G+C  YD IIVDSSDPVGPAE LF + F++++  ALNP GI+CTQ EC WLHLD I+ V       F  V+YAYT IPTYPSGQIGF+L               C       +L    R   A+   +L++YN  +H AAF LP FA +K+   R
Sbjct:   14 RRVVRTMSTTKWFSETEAMWPGQKFCLAQEEVLFHGKSNFQDVLVFKSQTYGNVLVLDGVIQCTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKQFFANTLATTFNDPRLTLMHDDAAAYL-RNGNCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHLDLIADVLGRVGKFFPTVQYAYTTIPTYPSGQIGFVL---------------CSLDESPNALNKPKRVVDAKTAENLRYYNSKIHEAAFILPSFAEKKIAPVR 308          
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|813163968|ref|XP_012203044.1| (spermidine synthase [Saprolegnia parasitica CBS 223.65] >gi|641532309|gb|KDO26346.1| spermidine synthase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 350.132 bits (897), Expect = 1.175e-117
Identity = 168/300 (56.00%), Postives = 210/300 (70.00%), Query Frame = 0
Query:   20 WFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHC-TYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 318
            WF E ++ W GQ+F L  E+VLFH +S +QDVL+F+S +YG VLVLDGVIQ TERDE +YQEMISHLPL++H NP+ VLI+GGGDGGVLREVAKHPS++ I MCEID MV DVSK+F +DTLAT++ DPRLTL+ DDAA F+ ++G C  YD IIVDSSDPVGPAE LF + F++++  ALNP GI+CTQ EC WLH+D I+ V       F  V+YAYT IPTYPSGQIGF+L               C       +L    R    +   +L++YN  +H AAF LP FA +K+   R
Sbjct:    6 WFSETEAMWPGQKFCLAQEEVLFHGKSDFQDVLVFKSQTYGNVLVLDGVIQVTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKKFFADTLATTFNDPRLTLMHDDAAAFL-RNGDCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHIDLIADVLGRVGGFFPTVQYAYTTIPTYPSGQIGFVL---------------CSLDESPNALNKPKRIVDEKTAENLRYYNSKIHEAAFVLPSFAEKKIAPVR 289          
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|298706538|emb|CBJ29508.1| (spermidine/spermine synthase [Ectocarpus siliculosus])

HSP 1 Score: 349.747 bits (896), Expect = 1.430e-117
Identity = 169/303 (55.78%), Postives = 219/303 (72.28%), Query Frame = 0
Query:   16 IKDGWFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 318
            IKDGWF E +  W GQ+FSL+V++VLFH RS +QDVL+F S  YGKVLVLDGVIQ TERDE +YQEM++H+P FA  +P+KVLI+GGGDGGVLRE+A+HP ++TIHMCEID MV +VSK F   T A+++ D RL LV +DAA+FV ++G+  YD IIVDSSDPVGPAE LF+ +F+Q++ +AL P G+I TQ EC WLHL  I+ V RAC +IF  V+YA+T +P+YPSGQIGF+L       S  E D           L   A TP+A +   L++Y+P +H AAF LP FA +++   R
Sbjct:    3 IKDGWFSETEVLWPGQKFSLEVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGHPKKVLIVGGGDGGVLREIARHPGVETIHMCEIDSMVCEVSKRFEFCT-ASAFGDARLKLVHEDAAEFVKKEGNNGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVL------ASVEERD-----------LSTPASTPNAAMTEVLRYYSPEVHQAAFVLPVFAEKEIAGVR 287          
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|669147204|ref|XP_008609164.1| (spermidine synthase [Saprolegnia diclina VS20] >gi|669147206|ref|XP_008609165.1| spermidine synthase, variant [Saprolegnia diclina VS20] >gi|530739402|gb|EQC37644.1| spermidine synthase [Saprolegnia diclina VS20] >gi|530739403|gb|EQC37645.1| spermidine synthase, variant [Saprolegnia diclina VS20])

HSP 1 Score: 350.132 bits (897), Expect = 3.302e-117
Identity = 166/300 (55.33%), Postives = 211/300 (70.33%), Query Frame = 0
Query:   20 WFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHC-TYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 318
            WF E ++ W GQ+F L  E+VLFH +S +QDVL+F+S +YG VLVLDGVIQ TERDE +YQEMISHLPL++H NP+ VLI+GGGDGGVLREVAKHPS++ I MCEID MV DVSK+F +++LAT++ DPRLTL+ DDAA ++ ++G C  YD IIVDSSDPVGPAE LF + F++++  ALNP GI+CTQ EC WLH+D I+ V       F  V+YAYT IPTYPSGQIGF+L               C       +L    R    +  A+L++YN  +H AAF LP FA +K+   R
Sbjct:   34 WFSETEAMWPGQKFCLAQEEVLFHGKSDFQDVLVFKSQTYGNVLVLDGVIQVTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKQFFANSLATTFNDPRLTLMHDDAAAYL-RNGQCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKNALNPNGIVCTQGECLWLHIDLIADVLGRVGQFFPTVQYAYTTIPTYPSGQIGFVL---------------CSLDESPNALNKPKRIVDEKTAANLRYYNSKIHEAAFVLPSFAEKKIAPVR 317          
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|953500045|emb|CEG38686.1| (spermidine synthase [Plasmopara halstedii])

HSP 1 Score: 348.977 bits (894), Expect = 3.496e-117
Identity = 161/299 (53.85%), Postives = 214/299 (71.57%), Query Frame = 0
Query:   20 WFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 318
            WF E ++ W GQ+F+LQVEKVLF  +S +QDVL+F+ST+YG VLVLDGVIQ TERDE AYQEMI+HLP+FAH  P++VLI+GGGDGGVLREV KH  ++ I MCEID MV DVSK+F ++T+AT++ DPR+TL+  DAA ++ ++    +D +IVDSSDPVGPAE L++A F+QS+  AL+P G+ICTQ EC WLHLD I  V + C  +F+ V YAY+ IPTYPSGQIGF++   G                   S+    RTP A++  +L++Y+  +H A+F LP FA +K+   R
Sbjct:   11 WFSETEAMWPGQKFALQVEKVLFQGKSDFQDVLVFKSTTYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVIKHDCVEEIIMCEIDSMVCDVSKKFFTETVATAFNDPRVTLLHADAALYLHENTTNKFDVVIVDSSDPVGPAEVLYKAEFYQSMKNALSPDGVICTQGECLWLHLDLIVDVMQRCQSLFSTVNYAYSTIPTYPSGQIGFIMCSSG------------------QSVDKPKRTPDAKMSKTLRYYSAKIHEASFVLPGFAEQKIATVR 291          
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|1173935960|gb|OQR86998.1| (spermidine synthase [Achlya hypogyna])

HSP 1 Score: 347.821 bits (891), Expect = 2.602e-116
Identity = 166/300 (55.33%), Postives = 211/300 (70.33%), Query Frame = 0
Query:   20 WFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHC-TYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEAR 318
            WF E ++ W GQ+F L  E+VL+H +S +QDVL+F+S +YG VLVLDGVIQ TERDE +YQEMISHLPL++H NP+ VLI+GGGDGGVLREVAKHPS++ I MCEID MV DVSK++ +++LAT++ DPRLTL+ DDAA ++ ++G C  YD IIVDSSDPVGPAE LF + F++++ KALNP GI+CTQ EC WLHLD I+ V       F  V+YAYT IPTYPSGQIGF+L               C       +L    RT   +    L++YN  +H AAF LP FA +K+   R
Sbjct:   35 WFSETEAMWPGQKFCLAQEEVLYHGKSDFQDVLVFKSQTYGNVLVLDGVIQCTERDEFSYQEMISHLPLYSHANPKSVLIVGGGDGGVLREVAKHPSVEKIVMCEIDPMVCDVSKKYFANSLATTFNDPRLTLMHDDAAAYL-RNGQCGKYDVIIVDSSDPVGPAEVLFRSEFYENMKKALNPNGIVCTQGECLWLHLDLIADVLGRVGQFFPTVQYAYTTIPTYPSGQIGFVL---------------CSLDESPNALSKPKRTVDPKTAEELRYYNSKIHEAAFVLPSFAEKKIAPVR 318          
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|676389231|ref|XP_009037894.1| (hypothetical protein AURANDRAFT_59112 [Aureococcus anophagefferens] >gi|323451384|gb|EGB07261.1| hypothetical protein AURANDRAFT_59112 [Aureococcus anophagefferens])

HSP 1 Score: 346.665 bits (888), Expect = 3.629e-116
Identity = 172/308 (55.84%), Postives = 216/308 (70.13%), Query Frame = 0
Query:   17 KDGWFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLV----------VDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFTEVEYAYTAIPTYPSGQIGFMLLYKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKL 314
            K+ WF E +  W GQRFSL+V +VL H+RSA+QD+L+FQS +YG+VLVLDGVIQ TERDE AYQEMI+HLPLF+HP P++VLI+GGGDGGVLREVA+H  ++TI MCEID  V++VSK+F +++ AT+Y D RLTLV              A+  T  G   YD IIVDSSDPVGPAE LFE AF+ S+  AL PGG +CTQ EC WLHL  ISKV  AC D+F  VEYAYT +PTYPSGQIGF++         + D+ +   ++P+       R P   +Q  LK+Y+P +H AAF LP FA R+L
Sbjct:    7 KENWFAESEVMWPGQRFSLKVGEVLHHSRSAFQDILVFQSETYGRVLVLDGVIQLTERDEFAYQEMIAHLPLFSHPEPKRVLIVGGGDGGVLREVARHACVETIDMCEIDAGVVEVSKKFFAESTATAYGDARLTLVHADAAADPAVAAALARRQTPGGWPGYDVIIVDSSDPVGPAETLFEPAFYDSMRAALAPGGAVCTQGECMWLHLPLISKVVSACRDLFPTVEYAYTCVPTYPSGQIGFIM--------CSLDESRHALVKPV-------RAPVGHLQDQLKYYSPDVHAAAFVLPPFAEREL 299          
BLAST of EWM29611.1 vs. NCBI_GenBank
Match: gi|1109059813|ref|XP_010460158.2| (PREDICTED: spermidine synthase 1 [Camelina sativa])

HSP 1 Score: 347.436 bits (890), Expect = 4.041e-115
Identity = 172/304 (56.58%), Postives = 215/304 (70.72%), Query Frame = 0
Query:   19 GWFEERQSFWTGQRFSLQVEKVLFHARSAYQDVLLFQSTSYGKVLVLDGVIQATERDEMAYQEMISHLPLFAHPNPRKVLIIGGGDGGVLREVAKHPSIDTIHMCEIDKMVIDVSKEFMSDTLATSYEDPRLTLVVDDAAKFVTQDGHCTYDCIIVDSSDPVGPAEALFEAAFFQSLHKALNPGGIICTQAECQWLHLDFISKVYRACCDIFT-EVEYAYTAIPTYPSGQIGFMLL-YKGPETSAAEDDGKCDDLRPLTSLRVAARTPSAEVQASLKFYNPALHTAAFALPEFARRKLDEARAQ 320
            GWF E    W G+  SL+VEKVLF  +S YQDV++FQS +YGKVLVLDGVIQ TERDE AYQEMI+HLPL + PNP+KVL+IGGGDGGVLREVA+HPS++ I MCEIDKMV+DVSK+F  D +A  YEDPR+ LV+ D   F+      +YD +IVDSSDP+GPA+ LFE  FFQS+ +AL PGG++CTQAE  WLH+D I  +   C +IF   V YA+T++PTYPSG IGFML   +GPE          D   PL  +  +    S++    LKFYN  +H+AAF LP FA RK+ E++A 
Sbjct:  103 GWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHPSVEHIDMCEIDKMVVDVSKQFFPD-VAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPEV---------DFKHPLNPIDES----SSKSNGPLKFYNAEIHSAAFCLPSFA-RKVIESKAN 391          
The following BLAST results are available for this feature:
BLAST of EWM29611.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112182|gb|EWM29611.1|0.000e+0100.00spermidine synthase [Nannochloropsis gaditana][more]
gi|553191250|ref|XP_005855348.1|0.000e+0100.00spermidine synthase, partial [Nannochloropsis gadi... [more]
gi|1173959992|gb|OQS06162.1|3.401e-11854.34spermidine synthase [Thraustotheca clavata][more]
gi|813163968|ref|XP_012203044.1|1.175e-11756.00spermidine synthase [Saprolegnia parasitica CBS 22... [more]
gi|298706538|emb|CBJ29508.1|1.430e-11755.78spermidine/spermine synthase [Ectocarpus siliculos... [more]
gi|669147204|ref|XP_008609164.1|3.302e-11755.33spermidine synthase [Saprolegnia diclina VS20] >gi... [more]
gi|953500045|emb|CEG38686.1|3.496e-11753.85spermidine synthase [Plasmopara halstedii][more]
gi|1173935960|gb|OQR86998.1|2.602e-11655.33spermidine synthase [Achlya hypogyna][more]
gi|676389231|ref|XP_009037894.1|3.629e-11655.84hypothetical protein AURANDRAFT_59112 [Aureococcus... [more]
gi|1109059813|ref|XP_010460158.2|4.041e-11556.58PREDICTED: spermidine synthase 1 [Camelina sativa][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1072rna1072Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications