EWM20413.1, cds10261 (CDS) Nannochloropsis gaditana

Overview
NameEWM20413.1
Unique Namecds10261
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037270.1:14552..14605 +
Alignment locationKK037270.1:14703..14957 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20413.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101656g2.3586.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037270.1supercontigKK037270.1:14552..14605 +
KK037270.1supercontigKK037270.1:14703..14957 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20413.1 vs. NCBI_GenBank
Match: gi|585100001|gb|EWM20413.1| (hypothetical protein Naga_101656g2 [Nannochloropsis gaditana])

HSP 1 Score: 214.542 bits (545), Expect = 9.821e-71
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 MNSIRAQGIRHACLDDDQGQTAPLPNDADTTTKQAWSSFSEHTIGREQHHGCCAWRERQEKEESGRRRSGMGRSECHLRTSEAVRQRFYKQKNMEAAYGGME 102
            MNSIRAQGIRHACLDDDQGQTAPLPNDADTTTKQAWSSFSEHTIGREQHHGCCAWRERQEKEESGRRRSGMGRSECHLRTSEAVRQRFYKQKNMEAAYGGME
Sbjct:    1 MNSIRAQGIRHACLDDDQGQTAPLPNDADTTTKQAWSSFSEHTIGREQHHGCCAWRERQEKEESGRRRSGMGRSECHLRTSEAVRQRFYKQKNMEAAYGGME 102
The following BLAST results are available for this feature:
BLAST of EWM20413.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100001|gb|EWM20413.1|9.821e-71100.00hypothetical protein Naga_101656g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10292rna10292Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications