EWM20420.1, cds10253 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|585100014|gb|EWM20420.1| (cohesin complex subunit [Nannochloropsis gaditana]) HSP 1 Score: 2040 bits (5284), Expect = 0.000e+0 Identity = 1011/1011 (100.00%), Postives = 1011/1011 (100.00%), Query Frame = 0
Query: 1 MQPRNRSSVPYLLRLYHVKRELDQNEAKLSVVRSEFVQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQAEALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAVQERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEVRAEMKGLEDQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLCREQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIRPAVAYAVGPNTVICDSLDDARHLCFRKNEKVKAVTLSGSVIAKDGTMTGGKVEEAGGGRKGGGGTTGRWDAQDMRTVKEKLEALEAEAKEISRGRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQDALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRVKEVGKSIVQGDSLGSPSVSSRSKSPFPFSLVSRAFFLHPPGGRRVRGGQKGGSGEQCPLFPPATRPIRKVHGLLRARLGCPDQYLQGLDEKQQAPARRTGLPLTRRLRRALPRRRRLQRHAPHEAVGSIQAFMHRHSRPRCPPAFCAPLIRLPFACCPPFPVQVPGHGTAFGRRKNSRCPGLTFRHPLLQTSPLFRAGRGGRRPRQRERP 1011
MQPRNRSSVPYLLRLYHVKRELDQNEAKLSVVRSEFVQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQAEALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAVQERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEVRAEMKGLEDQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLCREQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIRPAVAYAVGPNTVICDSLDDARHLCFRKNEKVKAVTLSGSVIAKDGTMTGGKVEEAGGGRKGGGGTTGRWDAQDMRTVKEKLEALEAEAKEISRGRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQDALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRVKEVGKSIVQGDSLGSPSVSSRSKSPFPFSLVSRAFFLHPPGGRRVRGGQKGGSGEQCPLFPPATRPIRKVHGLLRARLGCPDQYLQGLDEKQQAPARRTGLPLTRRLRRALPRRRRLQRHAPHEAVGSIQAFMHRHSRPRCPPAFCAPLIRLPFACCPPFPVQVPGHGTAFGRRKNSRCPGLTFRHPLLQTSPLFRAGRGGRRPRQRERP
Sbjct: 1 MQPRNRSSVPYLLRLYHVKRELDQNEAKLSVVRSEFVQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQAEALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAVQERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEVRAEMKGLEDQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLCREQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIRPAVAYAVGPNTVICDSLDDARHLCFRKNEKVKAVTLSGSVIAKDGTMTGGKVEEAGGGRKGGGGTTGRWDAQDMRTVKEKLEALEAEAKEISRGRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQDALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRVKEVGKSIVQGDSLGSPSVSSRSKSPFPFSLVSRAFFLHPPGGRRVRGGQKGGSGEQCPLFPPATRPIRKVHGLLRARLGCPDQYLQGLDEKQQAPARRTGLPLTRRLRRALPRRRRLQRHAPHEAVGSIQAFMHRHSRPRCPPAFCAPLIRLPFACCPPFPVQVPGHGTAFGRRKNSRCPGLTFRHPLLQTSPLFRAGRGGRRPRQRERP 1011
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|553180027|ref|XP_005852805.1| (regulator of chromosome condensation-like protein [Nannochloropsis gaditana CCMP526] >gi|553189444|ref|XP_005855004.1| regulator of chromosome condensation-like protein [Nannochloropsis gaditana CCMP526] >gi|422294058|gb|EKU21358.1| regulator of chromosome condensation-like protein [Nannochloropsis gaditana CCMP526] >gi|422295727|gb|EKU23026.1| regulator of chromosome condensation-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 622.468 bits (1604), Expect = 0.000e+0 Identity = 352/398 (88.44%), Postives = 354/398 (88.94%), Query Frame = 0
Query: 408 MRTVKEKLEALEAEAKEISRGRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQDALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRVKEVG 805
MRTVKEKLEALEAEAKEISRGRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQDALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEI+TGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDN EEGEDGEEDGEESEETESEAGSG I+FSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRVKE G
Sbjct: 1 MRTVKEKLEALEAEAKEISRGRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQDALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIRTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNTEEGEDGEEDGEESEETESEAGSG------------------------------------------IDFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRVKEAG 356
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|553189447|ref|XP_005855005.1| (structural maintenance of chromosome-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294059|gb|EKU21359.1| structural maintenance of chromosome-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 592.808 bits (1527), Expect = 0.000e+0 Identity = 321/387 (82.95%), Postives = 324/387 (83.72%), Query Frame = 0
Query: 7 SSVPYLLRLYHVKRELDQNEAKLSVVRSEFVQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQAEALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAVQERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKES----------------------EVRAEMKGLEDQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC-------------------------------------REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIR 334
++ YL RLYHVKRELDQNEAKLSVVRSEF QALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQAEA+EEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAVQERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKES EVRAEMKGLEDQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIR
Sbjct: 105 TTEAYLHRLYHVKRELDQNEAKLSVVRSEFSQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQAEAMEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAVQERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEQLEKDIARMEQEGREAEERLVEVRAEMKGLEDQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLCRPSSRKFNQAVAVAGGRLMDAIVTDTKQTASECIRHLREQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIR 491
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|553190461|ref|XP_005855198.1| (structural maintenance of chromosome-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293867|gb|EKU21167.1| structural maintenance of chromosome-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0 Identity = 321/387 (82.95%), Postives = 324/387 (83.72%), Query Frame = 0
Query: 7 SSVPYLLRLYHVKRELDQNEAKLSVVRSEFVQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQAEALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAVQERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKES----------------------EVRAEMKGLEDQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC-------------------------------------REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIR 334
++ YL RLYHVKRELDQNEAKLSVVRSEF QALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQAEA+EEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAVQERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKES EVRAEMKGLEDQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIR
Sbjct: 69 TTEAYLHRLYHVKRELDQNEAKLSVVRSEFSQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQAEAMEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAVQERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEQLEKDIARMEQEGREAEERLVEVRAEMKGLEDQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLCRPSSRKFNQAVAVAGGRLMDAIVTDTKQTASECIRHLREQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIR 455
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|568000540|gb|ETL50555.1| (hypothetical protein L916_00233 [Phytophthora parasitica]) HSP 1 Score: 291.967 bits (746), Expect = 5.087e-79 Identity = 247/856 (28.86%), Postives = 418/856 (48.83%), Query Frame = 0
Query: 11 YLLRLYHVKRELDQNEAKLSVVRSEFVQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQA-EALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAV----------------------QERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEVRAEMKGLE---DQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC-------------------------------------REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIRPAVAYAVGPNTVICDSLDDARHLCFRKNEKVKAVTLSGSVIAKDGTMTGGKVEEAGGGRKGGGGTTGRWDAQDMRTVKEKLEALEAEAKEISR-GRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQ-DALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRV 801
YL +L+ V+ ++ Q E + + ++E ++ T + E R+V ++ + +E + P I+ + + Q K+ + +M+E L + E + L +D+ LE + +L KQA EA + + L ++L+EY+++K+ V + + L++++RQQ ADK + ER +S+ ++ RDI + K Q + D +KR + E K LE ++ R + +++QSQ E K A LE +K +YPGV+GRLVDLC R+ R G A FIPL I+ K NER+R LG ++ VDV+EC+ EI PA+ YAVG +TV+CDS+D AR LCFR+NEKVKAVTL+G V++K+G+MTGGK + R+ G RWD ++++ ++++ L E + I R G S L T + L +RL +A ++ ++ ++ A+K +V + +A V +R+ +++++ + VED++FA F +A+ + +IR YE+R LK + E + +H KLRAQL+Y + +DF +P+ A E+ +K + L KK L++ +E E S EE +K +R + K+ + +I +I EE+ LER++ ++ ++A +D++ LP + A + +G ED E E +A GS S ++ G +A+ ++FSSLP V + E + Y RI+ L E+E++QPNMRAL K++ + R+
Sbjct: 240 YLWQLFQVEDDIKQREETVRQYQDARRTCKQKEDAVAQTYNEKMKELNASLREVKTNRQQIQDFQNEMEDIQPQVIRLREQTQYSQRKIVESETKEKTMKERLEGKSEEIEALKKDLEALEKAKADLDAKQAQEASQRGEEGSLVLEGSRLEEYHRIKEAVQVKTNLLRDELESILRQQTADKNKVETLSQEHQENMRMIEMLTDDLKKADERVISMQRVISDTE-RDIAEAKMKLQ--NTDDEKRGQAEEKEKLTKRLERVNNKLRDLKDDKRQSQAEAKRADTLETLKRLYPGVRGRLVDLCKPTQRRYNMAVTVATGKHMDAIVVTDYRTGQECIQYLRDSRAGSAQFIPLDKIRVKPINERFRGLGNNIKMVVDVVECDAEIEPALHYAVG-DTVVCDSIDVARDLCFRQNEKVKAVTLNGMVVSKNGSMTGGKTQR--DLRRAG-----RWDEKEVQALQQEKNGLIEEIRAIERHGASYAKLQTLRTQIEGLSNRLTHAKADLAITETNRPKIQARIDNAQKRVAEVIDPELRKFAAAVDSRKGKLKQLEEQIHGVEDEMFADFSEAIGVDSIRVYEDRVLKRHHKAMEMRRKITEHEAKLRAQLEYLQSQDFNQPMLAAKERAAREAQHLKKLIEEEDGLMKKFTALRKEKKEQEGMRTTLTSKVEELEKELREIGSKKKKYEERKGKIQRRIASEEAVLERLKDHKTELFKRAALDQIKLPTI--ARKSANGSEDV----EMEVDAS-------GSGSPENAELLLGDDAANQD-----------------VDFSSLPDAHAVVDDK-EFDEINADYEKRISVLLTELEQIQPNMRALNKFDVIQNRI 1053
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|567972218|gb|ETK97206.1| (hypothetical protein L915_00231 [Phytophthora parasitica]) HSP 1 Score: 291.967 bits (746), Expect = 5.438e-79 Identity = 247/856 (28.86%), Postives = 418/856 (48.83%), Query Frame = 0
Query: 11 YLLRLYHVKRELDQNEAKLSVVRSEFVQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQA-EALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAV----------------------QERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEVRAEMKGLE---DQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC-------------------------------------REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIRPAVAYAVGPNTVICDSLDDARHLCFRKNEKVKAVTLSGSVIAKDGTMTGGKVEEAGGGRKGGGGTTGRWDAQDMRTVKEKLEALEAEAKEISR-GRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQ-DALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRV 801
YL +L+ V+ ++ Q E + + ++E ++ T + E R+V ++ + +E + P I+ + + Q K+ + +M+E L + E + L +D+ LE + +L KQA EA + + L ++L+EY+++K+ V + + L++++RQQ ADK + ER +S+ ++ RDI + K Q + D +KR + E K LE ++ R + +++QSQ E K A LE +K +YPGV+GRLVDLC R+ R G A FIPL I+ K NER+R LG ++ VDV+EC+ EI PA+ YAVG +TV+CDS+D AR LCFR+NEKVKAVTL+G V++K+G+MTGGK + R+ G RWD ++++ ++++ L E + I R G S L T + L +RL +A ++ ++ ++ A+K +V + +A V +R+ +++++ + VED++FA F +A+ + +IR YE+R LK + E + +H KLRAQL+Y + +DF +P+ A E+ +K + L KK L++ +E E S EE +K +R + K+ + +I +I EE+ LER++ ++ ++A +D++ LP + A + +G ED E E +A GS S ++ G +A+ ++FSSLP V + E + Y RI+ L E+E++QPNMRAL K++ + R+
Sbjct: 240 YLWQLFQVEDDIKQREETVRQYQDARRTCKQKEDAVAQTYNEKMKELNASLREVKTNRQQIQDFQNEMEDIQPQVIRLREQTQYSQRKIVESETKEKTMKERLEGKSEEIEALKKDLEALEKAKADLDAKQAQEASQRGEEGSLVLEGSRLEEYHRIKEAVQVKTNLLRDELESILRQQTADKNKVETLSQEHQENMRMIEILTDDLKKADERVISMQRVISDTE-RDIAEAKMKLQ--NTDDEKRGQAEEKEKLTKRLERVNNKLRDLKDDKRQSQAEAKRADTLETLKRLYPGVRGRLVDLCKPTQRRYNMAVTVATGKHMDAIVVTDYRTGQECIQYLRDSRAGSAQFIPLDKIRVKPINERFRGLGNNIKMVVDVVECDAEIEPALHYAVG-DTVVCDSIDVARDLCFRQNEKVKAVTLNGMVVSKNGSMTGGKTQR--DLRRAG-----RWDEKEVQALQQEKNGLIEEIRAIERHGASYAKLQTLRTQIEGLSNRLTHAKADLAITETNRPKIQARIDNAQKRVAEVIDPELRKFAAAVDSRKGKLKQLEEQIHGVEDEMFADFSEAIGVDSIRVYEDRVLKRHHKAMEMRRKITEHEAKLRAQLEYLQSQDFNQPMLAAKERAAREAQHLKKLIEEEDGLMKKFTALRKEKKEQEGMRTTLTSKVEELEKELREIGSKKKKYEERKGKIQRRIASEEAVLERLKDHKTELFKRAALDQIKLPTI--ARKSANGSEDV----EMEVDAS-------GSGSPENAELLLGDDAANQD-----------------VDFSSLPDAHAVVDDK-EFDEINADYEKRISVLLTELEQIQPNMRALNKFDVIQNRI 1053
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|570962247|gb|ETP27226.1| (hypothetical protein F441_00256 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 291.967 bits (746), Expect = 5.703e-79 Identity = 247/856 (28.86%), Postives = 418/856 (48.83%), Query Frame = 0
Query: 11 YLLRLYHVKRELDQNEAKLSVVRSEFVQALEQEQSLESTIQAEKAEAAVLQRDVGKAEKEQAKRRERLEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQA-EALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAV----------------------QERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEVRAEMKGLE---DQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC-------------------------------------REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIRPAVAYAVGPNTVICDSLDDARHLCFRKNEKVKAVTLSGSVIAKDGTMTGGKVEEAGGGRKGGGGTTGRWDAQDMRTVKEKLEALEAEAKEISR-GRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQ-DALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRV 801
YL +L+ V+ ++ Q E + + ++E ++ T + E R+V ++ + +E + P I+ + + Q K+ + +M+E L + E + L +D+ LE + +L KQA EA + + L ++L+EY+++K+ V + + L++++RQQ ADK + ER +S+ ++ RDI + K Q + D +KR + E K LE ++ R + +++QSQ E K A LE +K +YPGV+GRLVDLC R+ R G A FIPL I+ K NER+R LG ++ VDV+EC+ EI PA+ YAVG +TV+CDS+D AR LCFR+NEKVKAVTL+G V++K+G+MTGGK + R+ G RWD ++++ ++++ L E + I R G S L T + L +RL +A ++ ++ ++ A+K +V + +A V +R+ +++++ + VED++FA F +A+ + +IR YE+R LK + E + +H KLRAQL+Y + +DF +P+ A E+ +K + L KK L++ +E E S EE +K +R + K+ + +I +I EE+ LER++ ++ ++A +D++ LP + A + +G ED E E +A GS S ++ G +A+ ++FSSLP V + E + Y RI+ L E+E++QPNMRAL K++ + R+
Sbjct: 240 YLWQLFQVEDDIKQREETVRQYQDARRTCKQKEDAVAQTYNEKMKELNASLREVKTNRQQIQDFQNEMEDIQPQVIRLREQTQYSQRKIVESETKEKTMKERLEGKSEEIEALKKDLEALEKAKADLDAKQAQEASQRGEEGSLVLEGSRLEEYHRIKEAVQVKTNLLRDELESILRQQTADKNKVETLSQEHQENMRMIEILTDDLKKADERVISMQRVISDTE-RDIAEAKMKLQ--NTDDEKRGQAEEKEKLTKRLERVNNKLRDLKDDKRQSQAEAKRADTLETLKRLYPGVRGRLVDLCKPTQRRYNMAVTVATGKHMDAIVVTDYRTGQECIQYLRDSRAGSAQFIPLDKIRVKPINERFRGLGNNIKMVVDVVECDAEIEPALHYAVG-DTVVCDSIDVARDLCFRQNEKVKAVTLNGMVVSKNGSMTGGKTQR--DLRRAG-----RWDEKEVQALQQEKNGLIEEIRAIERHGASYAKLQTLRTQIEGLSNRLTHAKADLAITETNRPKIQARIDNAQKRVAEVIDPELRKFAAAVDSRKGKLKQLEEQIHGVEDEMFADFSEAIGVDSIRVYEDRVLKRHHKAMEMRRKITEHEAKLRAQLEYLQSQDFNQPMLAAKERAAREAQHLKKLIEEEDGLMKKFTALRKEKKEQEGMRTTLTSKVEELEKELREIGSKKKKYEERKGKIQRRIASEEAVLERLKDHKTELFKRAALDQIKLPTI--ARKSANGSEDV----EMEVDAS-------GSGSPENAELLLGDDAANQD-----------------VDFSSLPDAHAVVDDK-EFDEINADYEKRISVLLTELEQIQPNMRALNKFDVIQNRI 1053
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|567972219|gb|ETK97207.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|570962248|gb|ETP27227.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 288.115 bits (736), Expect = 6.136e-79 Identity = 236/789 (29.91%), Postives = 391/789 (49.56%), Query Frame = 0
Query: 78 LEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQA-EALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAV----------------------QERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEVRAEMKGLE---DQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC-------------------------------------REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIRPAVAYAVGPNTVICDSLDDARHLCFRKNEKVKAVTLSGSVIAKDGTMTGGKVEEAGGGRKGGGGTTGRWDAQDMRTVKEKLEALEAEAKEISR-GRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQ-DALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRV 801
+E + P I+ + + Q K+ + +M+E L + E + L +D+ LE + +L KQA EA + + L ++L+EY+++K+ V + + L++++RQQ ADK + ER +S+ ++ RDI + K Q + D +KR + E K LE ++ R + +++QSQ E K A LE +K +YPGV+GRLVDLC R+ R G A FIPL I+ K NER+R LG ++ VDV+EC+ EI PA+ YAVG +TV+CDS+D AR LCFR+NEKVKAVTL+G V++K+G+MTGGK + R+ G RWD ++++ ++++ L E + I R G S L T + L +RL +A ++ ++ ++ A+K +V + +A V +R+ +++++ + VED++FA F +A+ + +IR YE+R LK + E + +H KLRAQL+Y + +DF +P+ A E+ +K + L KK L++ +E E S EE +K +R + K+ + +I +I EE+ LER++ ++ ++A +D++ LP + A + +G ED E E +A GS S ++ G +A+ ++FSSLP V + E + Y RI+ L E+E++QPNMRAL K++ + R+
Sbjct: 25 MEDIQPQVIRLREQTQYSQRKIVESETKEKTMKERLEGKSEEIEALKKDLEALEKAKADLDAKQAQEASQRGEEGSLVLEGSRLEEYHRIKEAVQVKTNLLRDELESILRQQTADKNKVETLSQEHQENMRMIEILTDDLKKADERVISMQRVISDTE-RDIAEAKMKLQ--NTDDEKRGQAEEKEKLTKRLERVNNKLRDLKDDKRQSQAEAKRADTLETLKRLYPGVRGRLVDLCKPTQRRYNMAVTVATGKHMDAIVVTDYRTGQECIQYLRDSRAGSAQFIPLDKIRVKPINERFRGLGNNIKMVVDVVECDAEIEPALHYAVG-DTVVCDSIDVARDLCFRQNEKVKAVTLNGMVVSKNGSMTGGKTQR--DLRRAG-----RWDEKEVQALQQEKNGLIEEIRAIERHGASYAKLQTLRTQIEGLSNRLTHAKADLAITETNRPKIQARIDNAQKRVAEVIDPELRKFAAAVDSRKGKLKQLEEQIHGVEDEMFADFSEAIGVDSIRVYEDRVLKRHHKAMEMRRKITEHEAKLRAQLEYLQSQDFNQPMLAAKERAAREAQHLKKLIEEEDGLMKKFTALRKEKKEQEGMRTTLTSKVEELEKELREIGSKKKKYEERKGKIQRRIASEEAVLERLKDHKTELFKRAALDQIKLPTI--ARKSANGSEDV----EMEVDAS-------GSGSPENAELLLGDDAANQD-----------------VDFSSLPDAHAVVDDK-EFDEINADYEKRISVLLTELEQIQPNMRALNKFDVIQNRI 771
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|568000541|gb|ETL50556.1| (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 287.73 bits (735), Expect = 6.572e-79 Identity = 236/789 (29.91%), Postives = 391/789 (49.56%), Query Frame = 0
Query: 78 LEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQA-EALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAV----------------------QERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEVRAEMKGLE---DQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC-------------------------------------REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIRPAVAYAVGPNTVICDSLDDARHLCFRKNEKVKAVTLSGSVIAKDGTMTGGKVEEAGGGRKGGGGTTGRWDAQDMRTVKEKLEALEAEAKEISR-GRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQ-DALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRV 801
+E + P I+ + + Q K+ + +M+E L + E + L +D+ LE + +L KQA EA + + L ++L+EY+++K+ V + + L++++RQQ ADK + ER +S+ ++ RDI + K Q + D +KR + E K LE ++ R + +++QSQ E K A LE +K +YPGV+GRLVDLC R+ R G A FIPL I+ K NER+R LG ++ VDV+EC+ EI PA+ YAVG +TV+CDS+D AR LCFR+NEKVKAVTL+G V++K+G+MTGGK + R+ G RWD ++++ ++++ L E + I R G S L T + L +RL +A ++ ++ ++ A+K +V + +A V +R+ +++++ + VED++FA F +A+ + +IR YE+R LK + E + +H KLRAQL+Y + +DF +P+ A E+ +K + L KK L++ +E E S EE +K +R + K+ + +I +I EE+ LER++ ++ ++A +D++ LP + A + +G ED E E +A GS S ++ G +A+ ++FSSLP V + E + Y RI+ L E+E++QPNMRAL K++ + R+
Sbjct: 25 MEDIQPQVIRLREQTQYSQRKIVESETKEKTMKERLEGKSEEIEALKKDLEALEKAKADLDAKQAQEASQRGEEGSLVLEGSRLEEYHRIKEAVQVKTNLLRDELESILRQQTADKNKVETLSQEHQENMRMIEMLTDDLKKADERVISMQRVISDTE-RDIAEAKMKLQ--NTDDEKRGQAEEKEKLTKRLERVNNKLRDLKDDKRQSQAEAKRADTLETLKRLYPGVRGRLVDLCKPTQRRYNMAVTVATGKHMDAIVVTDYRTGQECIQYLRDSRAGSAQFIPLDKIRVKPINERFRGLGNNIKMVVDVVECDAEIEPALHYAVG-DTVVCDSIDVARDLCFRQNEKVKAVTLNGMVVSKNGSMTGGKTQR--DLRRAG-----RWDEKEVQALQQEKNGLIEEIRAIERHGASYAKLQTLRTQIEGLSNRLTHAKADLAITETNRPKIQARIDNAQKRVAEVIDPELRKFAAAVDSRKGKLKQLEEQIHGVEDEMFADFSEAIGVDSIRVYEDRVLKRHHKAMEMRRKITEHEAKLRAQLEYLQSQDFNQPMLAAKERAAREAQHLKKLIEEEDGLMKKFTALRKEKKEQEGMRTTLTSKVEELEKELREIGSKKKKYEERKGKIQRRIASEEAVLERLKDHKTELFKRAALDQIKLPTI--ARKSANGSEDV----EMEVDAS-------GSGSPENAELLLGDDAANQD-----------------VDFSSLPDAHAVVDDK-EFDEINADYEKRISVLLTELEQIQPNMRALNKFDVIQNRI 771
BLAST of EWM20420.1 vs. NCBI_GenBank
Match: gi|570999115|gb|ETP55191.1| (hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 286.189 bits (731), Expect = 2.218e-78 Identity = 235/789 (29.78%), Postives = 391/789 (49.56%), Query Frame = 0
Query: 78 LEALAPGKIKEEQGLKARQEKLKAEKEAGMSMREDLLQQKERKKGLAEDIAKLEATEQELQIKQA-EALEEMRASGVTLSEAKLQEYNKLKQQVSAQCQEGKARLQALVRQQEADKTEAAV----------------------QERELSLHLATKESAARDIEQQSAKTQQLSADLQKRAKESEVRAEMKGLE---DQQRAYRQERKQSQHEEKMAAALEIMKDMYPGVKGRLVDLC-------------------------------------REQRVGVADFIPLSGIKDKSPNERYRALGEAFRLAVDVIECEDEIRPAVAYAVGPNTVICDSLDDARHLCFRKNEKVKAVTLSGSVIAKDGTMTGGKVEEAGGGRKGGGGTTGRWDAQDMRTVKEKLEALEAEAKEISR-GRSKQALADKSTALNQLRSRLATTDQAVAFCQSRIKELTVQLQAAEKAAGKVQTAQ-DALSARVSTRQKEMQEVRTSMEAVEDKIFAAFCKALSLKNIREYEERELKAMREWEEKLASLRDHRDKLRAQLDYEEGRDFEEPLRKAIEKVKALKAEIKTGEDSLASLHKKEEGLKEAMQEAEATLAEAKSLYEEKQKLVRGLTKKRTSSVAARTEIASKITHEESALERIRARIHDILQKARVDEVDLPMLDNAEEGEDGEEDGEESEETESEAGSGMKKLRGSTSTASSSFSGGGEASTHPSHSQAPRIRKDRKELDKINFSSLPKKEKVAKARDELETTRKRYHDRIADLQGEVEKMQPNMRALEKYEEMSRRV 801
+E + P I+ + + Q K+ + +M+E L + + + L +D+ LE + +L KQA EA + + L ++L+EY+++K+ V + + L++++RQQ ADK + ER +S+ ++ RDI + K Q + D +KR + E K LE ++ R + +++QSQ E K A LE +K +YPGV+GRLVDLC R+ R G A FIPL I+ K NER+R LG ++ VDV+EC+ EI PA+ YAVG +TV+CDS+D AR LCFR+NEKVKAVTL+G V++K+G+MTGGK + R+ G RWD ++++ ++++ L E + I R G S L T + L +RL +A ++ ++ ++ A+K +V + +A V +R+ +++++ + VED++FA F +A+ + +IR YE+R LK + E + +H KLRAQL+Y + +DF +P+ A E+ +K + L KK L++ +E E S EE +K +R + K+ + +I +I EE+ LER++ ++ ++A +D++ LP + A + +G ED E E +A GS S ++ G +A+ ++FSSLP V + E + Y RI+ L E+E++QPNMRAL K++ + R+
Sbjct: 25 MEDIQPQVIRLREQTQYSQRKIVESETKEKTMKERLEGKSKEIEALKKDLEALEKAKADLDAKQAQEASQRGEEGSLVLEGSRLEEYHRIKEAVQVKTNLLRDELESILRQQTADKNKVETLSQEHQENMRMIEMLTDDLKKADERVISMQRVISDTE-RDIAEAKMKLQ--NTDDEKRGQAEEKEKLTKRLERVNNKLRDLKDDKRQSQAEAKRADTLETLKRLYPGVRGRLVDLCKPTQRRYNMAVTVATGKHMDAIVVTDYRTGQECIQYLRDSRAGSAQFIPLDKIRVKPINERFRGLGNNIKMVVDVVECDAEIEPALHYAVG-DTVVCDSIDVARDLCFRQNEKVKAVTLNGMVVSKNGSMTGGKTQR--DLRRAG-----RWDEKEVQALQQEKNGLIEEIRAIERHGASYAKLQTLRTQIEGLSNRLTHAKADLAITETNRPKIQARIDNAQKRVAEVIDPELRKFAAAVDSRKGKLKQLEEQIHGVEDEMFADFSEAIGVDSIRVYEDRVLKRHHKAMEMRRKITEHEAKLRAQLEYLQSQDFNQPMLAAKERAAREAQHLKKLIEEEDGLMKKFTALRKEKKEQEGMRTTLTSKVEELEKELREIGSKKKKYEERKGKIQRRIASEEAVLERLKDHKTELFKRAALDQIKLPTI--ARKSANGSEDV----EMEVDAS-------GSGSPENAELLLGDDAANQD-----------------VDFSSLPDAHVVVDDK-EFDEINADYEKRISVLLTELEQIQPNMRALNKFDVIQNRI 771 The following BLAST results are available for this feature:
BLAST of EWM20420.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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