EWM20423.1, cds10249 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|585100019|gb|EWM20423.1| (trypsin family [Nannochloropsis gaditana] >gi|585100020|gb|EWM20424.1| trypsin family [Nannochloropsis gaditana]) HSP 1 Score: 1093.95 bits (2828), Expect = 0.000e+0 Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0 Query: 1 MVSTLCKRPWSCPSQEAKEALRPFGCRAPFNPNFPSTRLRTSPSSSPTSSSSSHLSILELLKATIGLHSGPWSLPISNTSVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSRLAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHLEVKQGRERVKGMGARRVAFLMLSSVLAHWMARPRPTWQFTYSDSY 533 MVSTLCKRPWSCPSQEAKEALRPFGCRAPFNPNFPSTRLRTSPSSSPTSSSSSHLSILELLKATIGLHSGPWSLPISNTSVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSRLAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHLEVKQGRERVKGMGARRVAFLMLSSVLAHWMARPRPTWQFTYSDSY Sbjct: 1 MVSTLCKRPWSCPSQEAKEALRPFGCRAPFNPNFPSTRLRTSPSSSPTSSSSSHLSILELLKATIGLHSGPWSLPISNTSVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSRLAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHLEVKQGRERVKGMGARRVAFLMLSSVLAHWMARPRPTWQFTYSDSY 533
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|553190458|ref|XP_005855197.1| (trypsin family [Nannochloropsis gaditana CCMP526] >gi|422293866|gb|EKU21166.1| trypsin family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 689.878 bits (1779), Expect = 0.000e+0 Identity = 341/364 (93.68%), Postives = 343/364 (94.23%), Query Frame = 0 Query: 136 ASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSR----------LAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHLE 489 ASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSG+ P R LAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSY+LVGGLLFLPASQ KVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHLE Sbjct: 20 ASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGIAPWLEKAGLPLRPGDILMEVDGLAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYILVGGLLFLPASQAKVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHLE 383
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|553189438|ref|XP_005855002.1| (trypsin family [Nannochloropsis gaditana CCMP526] >gi|422294056|gb|EKU21356.1| trypsin family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 610.142 bits (1572), Expect = 0.000e+0 Identity = 301/325 (92.62%), Postives = 304/325 (93.54%), Query Frame = 0 Query: 175 EAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSR----------LAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHLE 489 +AAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSG+ P R LAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSY+LVGGLLFLPASQ KVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHLE Sbjct: 194 QAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGIAPWLEKAGLPLRPGDILMEVDGLAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYILVGGLLFLPASQAKVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHLE 518 HSP 2 Score: 144.05 bits (362), Expect = 2.500e-33 Identity = 71/75 (94.67%), Postives = 71/75 (94.67%), Query Frame = 0 Query: 105 SRPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPL 179 S PSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVE L Sbjct: 57 SLPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEVRSL 131
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|553190446|ref|XP_005855193.1| (hypothetical protein NGA_0138600 [Nannochloropsis gaditana CCMP526] >gi|422293862|gb|EKU21162.1| hypothetical protein NGA_0138600 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 240.736 bits (613), Expect = 4.817e-74 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 Query: 1 MVSTLCKRPWSCPSQEAKEALRPFGCRAPFNPNFPSTRLRTSPSSSPTSSSSSHLSILELLKATIGLHSGPWSLPISNTSVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDK 118 MVSTLCKRPWSCPSQEAKEALRPFGCRAPFNPNFPSTRLRTSPSSSPTSSSSSHLSILELLKATIGLHSGPWSLPISNTSVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDK Sbjct: 37 MVSTLCKRPWSCPSQEAKEALRPFGCRAPFNPNFPSTRLRTSPSSSPTSSSSSHLSILELLKATIGLHSGPWSLPISNTSVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDK 154
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|545370795|ref|XP_005650005.1| (trypsin-like serine protease [Coccomyxa subellipsoidea C-169] >gi|384251984|gb|EIE25461.1| trypsin-like serine protease [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 128.642 bits (322), Expect = 3.807e-28 Identity = 133/458 (29.04%), Postives = 206/458 (44.98%), Query Frame = 0 Query: 60 LLKATIGLHSGPWSL----PISNT----SVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLN--------LYRNGHSG---WGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVG------GSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSRLAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPAS----QTKVVAHQARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLARLLKFNGVPVKNLAHL 488 L + +G ++ P S P+ NT SV+++ + V N +PW+ P S S +AFV D+ KR ++T HV+ + + R G + +RAR+LC DLALLTVDE FWS ++ Q P+ D +V Y LG L++ + R H+ G + A+ G SGGP F+ + + V Q D + + +P ++ +R+YE HG F G S S F+ ++P M A+S VL + + D G + + +V+ + K L VLREG+ ++LK P+VP+ + P SY ++GGL+F+P S + H R APV+ L AE RE P+E+ V+L+++ EIN GY+ + R NG V+NLA L Sbjct: 69 LEETDVGTNAKPASKATGKPVLNTRALRSVLKVFVVQAVPNYAQPWQMRPQRSS--SGSAFVTDVQKRTIMTNAHVIMNATTVHVRRPG--NPKKWRARILCEGIICDLALLTVDEPDFWS---EDLMSLQFVSVPE-------------LQDSILVAGYPLGGDSLSITKGIVSRVVMTRYAHASNKLLGIQIDAAINPGNSGGPAFSDLQEGKVAGVAFSKLSQADN-VGYIIPWKIVAHFLREYEDHGVFRGCCSVPPNGSGSLVFK--IDP-------MAPATS-VLKENDVVLEIEGVLIADDGTVEFRNEE-RVEFSHIVRSKHIDDWLHLLVLREGKEMELKYQLNLRRPLVPVLAGVDCVP-SYFIIGGLVFVPLSIPFLEHAYGGHAWR-KLAPVQI-LALVAEYRERPDEQVVVLFQVLAAEINFGYKFQTVRCESLNGEEVRNLARL 491
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|168001216|ref|XP_001753311.1| (predicted protein [Physcomitrella patens] >gi|162695597|gb|EDQ81940.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 117.472 bits (293), Expect = 5.295e-24 Identity = 108/390 (27.69%), Postives = 177/390 (45.38%), Query Frame = 0 Query: 119 RYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGF--YNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGW-GGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSRLAVDDQGVISLPPDRMQVDLRG--------------LWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVVAHQARINQAPVETQLLFKAEP--REHPEEEYVLLWRIYPHEINEGYQERLARLLK-FNGVPVKNLAHL 488 R L+T H + H ++ R G + + A VL + D+ALL VD++ FW GVE PL R VTV G+ +S++ +V S + + Y +G S G + A+ G SGGPVF + G + G I + +P +I + Y+ +G++ G S +Q+L NP LR L M GVL+ P+ A+ +G + L D + V G L K G K+LR+G V++++ K +VP+ P SY++V GL+F P + + + + ++L K+ E +E+ V++ ++ +++N GY+E L+K FNGV ++NL HL Sbjct: 406 RRLLTNAHCVEHHTQVKVKRRG--DDTKFVATVLAIGPECDIALLAVDDEEFWKGVE--PLKFGSLPRLQDAVTVVGYPIGGESISVTSGVV-------SRIEVTSYVHGASELLGVQIDAAINAGNSGGPVFHEN-GECVGIAFQSLKGADAENIGYVIPTTVIHHFLSDYDTNGKYTGFPSMGVLWQKLENPALRAFLKMKPDQKGVLVRRVEPTSPAFQAI-KEGDVLLSFDNIPVANEGTVPFRAGERISFGFLISQKFSGDTAKCKMLRDGEVIEIETTLKAPVHLVPVHIEGKLP--SYLIVAGLVFTPVCNPYLESEYGQDFEYDAPVKILEKSRHGMAEFDDEQLVVVSQVLANDVNIGYEEIANTLVKTFNGVKIRNLRHL 780
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|545370488|ref|XP_005649879.1| (trypsin-like serine protease [Coccomyxa subellipsoidea C-169] >gi|384251858|gb|EIE25335.1| trypsin-like serine protease [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 114.39 bits (285), Expect = 1.285e-23 Identity = 121/432 (28.01%), Postives = 195/432 (45.14%), Query Frame = 0 Query: 80 SVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEWMVQDYALGPSCLNLNLYRNGHSGW-GGRDGPAMPFGCSGGPVFAQT-KGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSRLAV----DDQGVISLPPDRMQVDLRG--------------LWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVVAHQA--RINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERL-ARLLKFNGVPVKNLAHL 488 +VV++ N + PW+R S S +++L+T H + H ++ R G + + + A VL + D+ALLTV ++AFW GV PL R V V G+ + D V + S + + Y +G + G + A+ G SGGPVF + + +G + M AG I + +P +I + Y+ +G+F G K+QR+ + LR S G+ GVL+ S +P S LA DD I + D +QV G L K G+ +LR+G+ V L+ P R +VP+ P SY++V G++F + + + I++ PV+ REH +EE V+L ++ + GY++ ++LKFN PV+NL HL Sbjct: 3 AVVKVYCVHTEPNFSLPWQRKRQYASTSSGFMVQGAKGQKWLLTNAHSVEYHSQVKVKRRG--DDQKFLAEVLAIGTECDIALLTVADEAFWEGV--VPLELGPLPRLQDAVAVVGY---PIGGDTISVTSGVV--SRIEVTSYVHGSTELLGVQIDAAINSGNSGGPVFNEIGQCVGIAFQSM--AGSDAENIGYVIPTPVINHFLTDYQRNGRFTGFPVLGVKWQRMESAGLRASYGLMPPLKGVLVR--SIWPTSPLAAVAGPDD---IIMRFDGIQVACDGTVPFRTGERIHFNYLISQKYTGEHAQLDLLRKGQEVSLRVPLDRPHALVPLHLGGHQP--SYLVVAGIVFTVCCEPYLESEYGADYISETPVKLLDRLLYGQREHIDEEVVILSQVLACDATLGYEDLFNTQVLKFNETPVRNLRHL 416
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|470486085|ref|XP_004344572.1| (DegPtype protease [Acanthamoeba castellanii str. Neff] >gi|440799786|gb|ELR20829.1| DegPtype protease [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 113.235 bits (282), Expect = 5.272e-23 Identity = 116/426 (27.23%), Postives = 187/426 (43.90%), Query Frame = 0 Query: 92 NETEPWRRYPVGFSRPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYN--KSLTTDEWMV-----QDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSR-LAVDDQGVISLPPDRMQVD--------LRGLWD----LKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVV--AH------QARINQAPVETQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERLA-RLLKFNGVPVKNLAHL 488 N PW+ S +AF L R ++T HV+A H I + + + Y A+VL A D DLALLTV ED FW+ + PL V V G+ +++ +V Q YA + +GH D P G SGGPV K +G + +++A + +P +I+ ++ E HG++ G + + Q + NP LR M +GVL+ ++ + D ++S+ +R+ D R +D +K+ G+ ++LR G ++ V P+VPI P S+ + GGL+F P +Q + +H + N +P + + E E P++E V+L + HEIN GYQ+ +LL+FN +KNL L Sbjct: 86 NYVMPWQMKAT--SEKVGSAFA--LSGRRILTNAHVVADHTYIAVKK--FSGTQKYPAKVLSVAHDCDLALLTVTEDDFWTDI--TPLELGDVPHLQDTVAVVGYPTGGDTISVTRGVVSRIEPQRYA----------HASGHLLAVQIDAAINP-GNSGGPVLKDDKVVGVAFQSLVNA----ENMGFIIPVPIIKHFLKDIELHGKYTGFGALGIQCQPMDNPQLRHFHKMARDITGVLVNHVEAVSKAKGVLQKDDVLLSIDGNRIANDGTVAFRKRERIFFDYVTSMKQVGEYCRLEILRNGEKQEVSVQLSPVQPLVPIHRFDQRP--SFFIHGGLVFTPLTQPYLQEGSHFYFQYGEDWYNSSPRKLCMKALTEYMEEPDQEVVILSAVLVHEINYGYQQMTNLQLLRFNDQKIKNLKQL 486
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|545703477|ref|XP_005704064.1| (serine-type endopeptidase isoform 1 [Galdieria sulphuraria] >gi|452820503|gb|EME27544.1| serine-type endopeptidase isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 111.309 bits (277), Expect = 3.006e-22 Identity = 118/435 (27.13%), Postives = 200/435 (45.98%), Query Frame = 0 Query: 80 SVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGF----YNKSLT---TDEWMVQDYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVF-AQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSRLAVDDQGVIS----LP-PDRMQVDLRG--------LWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVVAHQARI--NQAPVE--TQLLFKAEPREHPEEEYVLLWRIYPHEINEGYQERL-ARLLKFNGVPVKNLAHL 488 SV +L N + PW++ +S +STAF + R ++T H + + + G + Y A+V+ D D+ALL+V++++FW GVE L++ VTV G+ N S+T +Q Y+ G L G + A+ G SGGP F ++ + +G + +L+ + I + +P ++Q + ++ +G + G F+FQR+ N YLR+S + S GVLI + P + VI+ +P + V RG L LK G+ T +++R G ++++ P +P +VPI P Y+ V GL+F+ S+ + + +APV+ +LL+ + E+ V+L ++ IN GY+ LL FNG V+NL HL Sbjct: 108 SVFKLYVTHCEPNYSLPWQKRRQTYS--TSTAFA--VGNRRILTNAHCVEHSTVVKIKKRG--SEKKYMAQVVSIGNDCDIALLSVEDESFWEGVEC--LSSGRLPYLQEAVTVVGYPIGGENISVTAGVVSRVELQQYSHGAIDL-----------LGVQIDAAINPGNSGGPAFNSRFECVGIAFQSLLTTEAEN--IGYIIPWLVVQHFLDDFDRNGYYTGFCYCGFEFQRMENEYLRKSFHLSDESGGVLIKRIAPTSPCSKVLQKGDVITHFDGVPIANDGTVSYRGGERINFHYLITLKFVGESCTVRIVRNGNIMEVSYPLFELPLLVPIHEKRPVP--EYLTVAGLVFVALSEPYLRSEYGEKWDFEAPVKLLDKLLYGY--KRTANEQVVILSQVLNARINVGYECLTNTELLHFNGTRVENLCHL 517
BLAST of EWM20423.1 vs. NCBI_GenBank
Match: gi|297334276|gb|EFH64694.1| (predicted protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 110.538 bits (275), Expect = 3.713e-22 Identity = 108/440 (24.55%), Postives = 187/440 (42.50%), Query Frame = 0 Query: 73 SLPISNTSVVRLSTAREVWNETEPWRRYPVGFSRPSSTAFVADLDKRYLVTADHVLASHFRITASRAGLAEGEGYRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYN--KSLTTDEWMVQ-----DYALGPSCLNLNLYRNGHSGWGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAGQPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGMGVASSGVLITEASFFPPSR---------LAVDDQGVISLPP----DRMQVDLRGLWDLKEDGQELTAKVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYVLVGGLLFLPASQTKVVAHQARINQAPVETQLLFKAEPREHPE---EEYVLLWRIYPHEINEGYQE-RLARLLKFNGVPVKNLAHL 488 S+ + SVV++ T V + +PW+ + S + FV + + ++T HV+A H + + G Y+A V + DLA+L +D + FW + PL D V V G+ + SL+ + V YA G + L + A+ G SGGP K G + S+ I + +P +I + E +GQ+ G + +Q + N LR MG +G+LI E + + LA+DD + + ++ +++ +K+ + + KVLREG+ K VPP+VP+ P SY + G +F+P + Q +++ L+ + PE E+ V++ ++ +IN GY + +++K NGV V+NL HL Sbjct: 67 SIDFAVNSVVKVFTVSSVPSILQPWQNWQQ--QESSGSGFV--ISGKKILTNAHVVADHIFLQVRKHG--SPTNYKAEVRAVGHECDLAILEIDNEEFWE--DLIPLELGEIPSLDESVAVLGYPHGGDSLSITKGYVSRVEYTQYAHGGTTL-----------LAIQTDAAINSGNSGGPAIIGNKTAGVAFQKCTSSDN----IGYIIPTPVITHFLTAVEENGQYGGFCTLDLSYQLMENSQLRNHFKMGPEMTGILINEINPLSDAYKRLRKDDIILAIDDVLIGNDAKVAFRNKERINFNHFVSMKKLNETVLLKVLREGKEHDFHISLKPVPPLVPVHQYDKLP--SYYIFAGFVFVP------------LTQPYIDSTLICNCANKNMPEKAGEQLVIISQVLADDINAGYTDFNDLKVIKVNGVQVENLKHL 469 The following BLAST results are available for this feature:
BLAST of EWM20423.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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