EWM20430.1, cds10244 (CDS) Nannochloropsis gaditana

Overview
NameEWM20430.1
Unique Namecds10244
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037269.1:7968..8133 +
Alignment locationKK037269.1:8338..8430 +
Alignment locationKK037269.1:8584..8690 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20430.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101496g2.5521.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037269.1supercontigKK037269.1:7968..8133 +
KK037269.1supercontigKK037269.1:8338..8430 +
KK037269.1supercontigKK037269.1:8584..8690 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM20430.1 vs. NCBI_GenBank
Match: gi|585100029|gb|EWM20430.1| (hypothetical protein Naga_101496g2 [Nannochloropsis gaditana])

HSP 1 Score: 246.128 bits (627), Expect = 1.472e-82
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 
Query:    1 MVDKRSLLSSETADELGGYSSFPPSSSATLQEGPSSGNKKGCRDPLFLVAFILNLGVIVWLAADYGASALRDAPPTQDEDPAKMHDGHPLIILCAALAGVAGVLAGAWMTFMIKKAADIIK 121
            MVDKRSLLSSETADELGGYSSFPPSSSATLQEGPSSGNKKGCRDPLFLVAFILNLGVIVWLAADYGASALRDAPPTQDEDPAKMHDGHPLIILCAALAGVAGVLAGAWMTFMIKKAADIIK
Sbjct:    1 MVDKRSLLSSETADELGGYSSFPPSSSATLQEGPSSGNKKGCRDPLFLVAFILNLGVIVWLAADYGASALRDAPPTQDEDPAKMHDGHPLIILCAALAGVAGVLAGAWMTFMIKKAADIIK 121
The following BLAST results are available for this feature:
BLAST of EWM20430.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100029|gb|EWM20430.1|1.472e-82100.00hypothetical protein Naga_101496g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10275rna10275Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications