EWM20447.1, cds10227 (CDS) Nannochloropsis gaditana

Overview
NameEWM20447.1
Unique Namecds10227
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037268.1:12859..13245 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20447.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101657g2.5462.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:12859..13245 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM20447.1 vs. NCBI_GenBank
Match: gi|585100072|gb|EWM20447.1| (hypothetical protein Naga_101657g2 [Nannochloropsis gaditana])

HSP 1 Score: 252.292 bits (643), Expect = 7.459e-85
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MHMRTNPYIKHRHSHPREEGSSAHQVNANKATARERSFPCPRAPLSQPPLPPPRRTGLITLRRLCFFRPWSLPSPSCALHCIETAVISSPAPLGARSVFAIPSHSCITFPPIMPFALLLLLSFSTAVS 128
            MHMRTNPYIKHRHSHPREEGSSAHQVNANKATARERSFPCPRAPLSQPPLPPPRRTGLITLRRLCFFRPWSLPSPSCALHCIETAVISSPAPLGARSVFAIPSHSCITFPPIMPFALLLLLSFSTAVS
Sbjct:    1 MHMRTNPYIKHRHSHPREEGSSAHQVNANKATARERSFPCPRAPLSQPPLPPPRRTGLITLRRLCFFRPWSLPSPSCALHCIETAVISSPAPLGARSVFAIPSHSCITFPPIMPFALLLLLSFSTAVS 128
The following BLAST results are available for this feature:
BLAST of EWM20447.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100072|gb|EWM20447.1|7.459e-85100.00hypothetical protein Naga_101657g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10258rna10258Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications