EWM20449.1, cds10224 (CDS) Nannochloropsis gaditana

Overview
NameEWM20449.1
Unique Namecds10224
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037268.1:9352..9497 +
Alignment locationKK037268.1:9709..10000 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20449.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101516g1.2192.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:9352..9497 +
KK037268.1supercontigKK037268.1:9709..10000 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20449.1 vs. NCBI_GenBank
Match: gi|585100075|gb|EWM20449.1| (hypothetical protein Naga_101516g1 [Nannochloropsis gaditana])

HSP 1 Score: 296.204 bits (757), Expect = 1.125e-101
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 
Query:    1 MHHSFHGNGTAMRVEIVGRDGNVLHTQILRQKRVVEKTGGGAEGVLEVKSRDRRMPVEMCLGWLRNLRGLENENGRYTCVKRPCRSRNVACREERARGHRNTLINLTITPLKATRRQTVRESMAIRNSLYKIRCKYQSLLGETWM 145
            MHHSFHGNGTAMRVEIVGRDGNVLHTQILRQKRVVEKTGGGAEGVLEVKSRDRRMPVEMCLGWLRNLRGLENENGRYTCVKRPCRSRNVACREERARGHRNTLINLTITPLKATRRQTVRESMAIRNSLYKIRCKYQSLLGETWM
Sbjct:    1 MHHSFHGNGTAMRVEIVGRDGNVLHTQILRQKRVVEKTGGGAEGVLEVKSRDRRMPVEMCLGWLRNLRGLENENGRYTCVKRPCRSRNVACREERARGHRNTLINLTITPLKATRRQTVRESMAIRNSLYKIRCKYQSLLGETWM 145
The following BLAST results are available for this feature:
BLAST of EWM20449.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100075|gb|EWM20449.1|1.125e-101100.00hypothetical protein Naga_101516g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10255rna10255Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications