EWM20525.1, cds10149 (CDS) Nannochloropsis gaditana

Overview
NameEWM20525.1
Unique Namecds10149
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:62918..63943 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20525.1
ProductCarbonic anhydrase, alpha-class
Orig transcript idgnl|cribi|Naga_100335g3.5841.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:62918..63943 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR023561Carbonic_anhydrase_a-class
IPR001148Carbonic_anhydrase_a
Homology
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|585100204|gb|EWM20525.1| (Carbonic anhydrase, alpha-class [Nannochloropsis gaditana])

HSP 1 Score: 709.523 bits (1830), Expect = 0.000e+0
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
Query:    1 MHRLQLCILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSVAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARHADEGTVPGGKQVRMVKAGNPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQEILPETQVYSYGKVLK 341
            MHRLQLCILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSVAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARHADEGTVPGGKQVRMVKAGNPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQEILPETQVYSYGKVLK
Sbjct:    1 MHRLQLCILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSVAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARHADEGTVPGGKQVRMVKAGNPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQEILPETQVYSYGKVLK 341          
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|585100203|gb|EWM20524.1| (Alpha carbonic anhydrase [Nannochloropsis gaditana])

HSP 1 Score: 628.246 bits (1619), Expect = 0.000e+0
Identity = 302/337 (89.61%), Postives = 312/337 (92.58%), Query Frame = 0
Query:    6 LCILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSVAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARHADEGTVPGGKQVRMVKAGNPYWLLPKRKDYWHYQGSLTTVS-YGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQEILPETQVYSYGKVLK 341
            L ILFILPFATFAAFTKQKYTGGLFSDPTQKPQPS+AVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGL+++   TYEV FFG ACRKPFTLTVDGQVWVLWQIH HG S HSVNG YSP+E HM HLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTAR ADEGTVPGG++VRMVKAGNPYWLLPKRKDYWHYQGSL T S +G CQLNPG SFNSTINNVQWYVFKHQQT S SQIAW  DY C LPLPYLC +NRPLQEILPETQVYSYG+VLK
Sbjct:    4 LIILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVLK 340          
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|585102601|gb|EWM22174.1| (carbonate dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 144.05 bits (362), Expect = 1.400e-36
Identity = 107/338 (31.66%), Postives = 149/338 (44.08%), Query Frame = 0
Query:    9 LFILPFATFAAFTKQKYTGGLFSDPTQKPQPSVAVN------AWSYYPNT-FGTCN---GTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARHADEGTVPGGKQVRMVKAGNPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQEILPETQVYSY 336
            +++ P  T   FT       L   P    + + ++       +WSY  N  +  C+     +F  C       E CGP NW +I+     TC     G QQSPIN+         + KA G M FSG  C   I+    T+EVV   D C   F   + G  + L Q H H  +EHS+N  Y P+E H+VH  V      A     VL+VFL PG ++  F  L A  A     P    +      N Y +LP+   +WHY GSLTT     CQ   G S N       WY+FK   T+S SQ+ + T Y   LPL      +R  Q+++  T ++++
Sbjct:   20 IYLFPQNTMKIFTTSAACLALMMAPLSLIKAATSMEDLEKMESWSYIHNVNYAPCDDADAKSFGCCGKPEDGKERCGPDNWIHINETTTTTCA-NVKGNQQSPINIQTVGTTLTPMDKADGTMSFSGHTCEAFIEFKEGTWEVV-IPDTCT--FQAKIGGTDYKLLQFHFHN-AEHSINFSYMPLEVHLVHAKVDSPKDIA-----VLSVFLAPGASSTFFETLQANEAQAD--PDHPDLATKNKINAYDILPEDHSFWHYVGSLTT---PPCQTEKGQSVN-------WYLFKTPNTLSYSQLYYFTSYFRDLPLSDNGRISRDTQDLVEGTTLFTF 335          
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|1048144189|ref|WP_065779277.1| (carbonic anhydrase [Vibrio parahaemolyticus] >gi|1047922025|gb|OCP71910.1| carbonic anhydrase [Vibrio parahaemolyticus])

HSP 1 Score: 88.9669 bits (219), Expect = 4.525e-17
Identity = 79/253 (31.23%), Postives = 116/253 (45.85%), Query Frame = 0
Query:   75 GPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKAN-RLFNILTARHADEGTVPGGKQVRMVKAG-NPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQ 325
            GP +W   ++ C Q       G  QSPI++ A  +       A+ ++ + G +   L   G  T +    G+       LT+DG+ + L Q H H PSE+ V+G   P+EAH VH            N  V+AVF   GKAN  L N+L         VP   Q   ++A  + + L+P  KDY+ + GSLTT         P  S       V+W+V K  Q++SA QIA   +++ G        +NRP+Q
Sbjct:   30 GPEHWGEFASECAQ-------GKNQSPIDIHAATQAE----LAKLQLDYQG-KVVALTNNG-HTLQTSIEGENV-----LTIDGKAFALKQFHFHTPSENHVDGKSYPLEAHYVH-------ADEQGNLAVVAVFFEQGKANPALANLLE-------NVPERDQNVAIRAPFDAHALIPSDKDYYRFNGSLTT---------PPCS-----EGVRWFVIKDPQSISAEQIAQF-EHVMG-------ENNRPVQ 228          
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|1139888543|gb|ONI46444.1| (hypothetical protein AN641_00090 [Epulopiscium sp. SCG-C07WGA-EpuloA2])

HSP 1 Score: 87.8113 bits (216), Expect = 4.788e-17
Identity = 59/180 (32.78%), Postives = 85/180 (47.22%), Query Frame = 0
Query:  154 LTVDGQ------VWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARHADEGTVPGGKQVRMVKAGNPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQEI 327
            L VDG+      ++ L QIH H PSEH++NG+YS VEAH VH        + D    V+ V    G+ N  F  +     DE  +  G ++++ +      LLP+   ++HY GSLTT         P LS      NV+WYV   Q  +S  Q+    +Y  G        +NRP++ I
Sbjct:   41 LDVDGEALLMNRIFSLDQIHFHSPSEHTINGVYSDVEAHFVH-------KSEDGRLAVIGVLFNVGEENSAFETMLDEIEDED-LTNGFEMQVSE------LLPEDLAFYHYIGSLTT---------PPLS-----ENVEWYVLSEQLEISQEQLDRFNEYYIGNSHDTQDLNNRPVKYI 192          
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|1057573216|ref|WP_068865314.1| (carbonic anhydrase [Vibrio parahaemolyticus] >gi|1056144757|gb|ODA45657.1| carbonic anhydrase [Vibrio parahaemolyticus])

HSP 1 Score: 88.1965 bits (217), Expect = 1.010e-16
Identity = 80/253 (31.62%), Postives = 115/253 (45.45%), Query Frame = 0
Query:   75 GPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKAN-RLFNILTARHADEGTVPGGKQVRMVKAG-NPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQ 325
            GP +W   ++ C Q       G  QSPI++ A  +       A+ ++ + G +   L   G  T +    G+       LT+DG+ + L Q H H PSE+ V+G   P+EAH VH            N  V+AVF   GKAN  L N+L         VP   Q   ++A  +   L+P  KDY+ + GSLTT         P  S       V+W V K  Q++SA QIA L +++ G        +NRP+Q
Sbjct:   30 GPEHWGEFASECAQ-------GKNQSPIDIHAVTQAE----LAKLQLDYQG-KVVALTNNG-HTLQTSIEGENV-----LTIDGKAFALKQFHFHTPSENHVDGKSYPLEAHYVH-------ADEQGNLAVVAVFFEQGKANPALANLLE-------NVPERDQNVAIRAPFDANALIPSDKDYYRFNGSLTT---------PPCS-----EGVRWLVIKDPQSISAEQIAQL-EHVMG-------ENNRPVQ 228          
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|647078204|ref|WP_025638920.1| (carbonic anhydrase [Vibrio parahaemolyticus])

HSP 1 Score: 87.8113 bits (216), Expect = 1.508e-16
Identity = 80/253 (31.62%), Postives = 115/253 (45.45%), Query Frame = 0
Query:   75 GPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKAN-RLFNILTARHADEGTVPGGKQVRMVKAG-NPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQ 325
            GP +W   ++ C Q       G  QSPI++ A  +       A+ ++ + G +   L   G  T +    G+       LT+DG+V+ L Q H H PSE+ V+G   P+EAH VH            N  V+AVF   GKAN  L N+L         VP   Q   ++A  +   L+P  KDY+ + GSLTT         P  S       V+W V K  Q++SA QIA   +++ G        +NRP+Q
Sbjct:   30 GPEHWGEFASECAQ-------GKNQSPIDIHAATQAE----LAKLQLDYQG-KVVALTNNG-HTLQTSIEGENV-----LTIDGKVFALKQFHFHTPSENHVDGKSYPLEAHYVH-------ADEQGNLAVVAVFFEQGKANPALANLLE-------NVPERDQNVAIRAPFDANALIPSDKDYYRFNGSLTT---------PPCS-----EGVRWLVIKDPQSISAEQIAQF-EHVMG-------ENNRPVQ 228          
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|1197237696|ref|WP_086484667.1| (carbonic anhydrase [Vibrio parahaemolyticus] >gi|1194734612|gb|OUD24726.1| carbonic anhydrase [Vibrio parahaemolyticus])

HSP 1 Score: 87.8113 bits (216), Expect = 1.523e-16
Identity = 80/253 (31.62%), Postives = 114/253 (45.06%), Query Frame = 0
Query:   75 GPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKAN-RLFNILTARHADEGTVPGGKQVRMVKAG-NPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQ 325
            GP +W   ++ C Q       G  QSPI++ A  +       A+ ++ + G +   L   G  T +    G+       LT+DG+ + L Q H H PSE+ V+G   P+EAH VH            N  V+AVF   GKAN  L N+L         VP   Q   ++A  N   L+P  KDY+ + GSLTT         P  S       V+W V K  Q++SA QIA   +++ G        +NRP+Q
Sbjct:   30 GPEHWGEFASECAQ-------GKNQSPIDIHAATQAE----LAKLQLDYQG-KVVALTNNG-HTLQTSIEGENV-----LTIDGKAFALKQFHFHTPSENHVDGKSYPLEAHYVH-------ADEQGNLAVVAVFFEQGKANPALANLLE-------NVPERDQNVAIRAPFNANALIPSDKDYYRFNGSLTT---------PPCS-----EGVRWLVIKDPQSISAEQIAQF-EHVMG-------ENNRPVQ 228          
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|646741577|ref|WP_025577262.1| (carbonic anhydrase [Vibrio parahaemolyticus] >gi|1065253508|gb|ODW95650.1| carbonic anhydrase [Vibrio parahaemolyticus] >gi|1065262104|gb|ODX03926.1| carbonic anhydrase [Vibrio parahaemolyticus] >gi|1065263592|gb|ODX05375.1| carbonic anhydrase [Vibrio parahaemolyticus] >gi|1065271290|gb|ODX12824.1| carbonic anhydrase [Vibrio parahaemolyticus] >gi|1065275127|gb|ODX16516.1| carbonic anhydrase [Vibrio parahaemolyticus] >gi|1195785434|gb|OUJ42322.1| carbonic anhydrase [Vibrio parahaemolyticus])

HSP 1 Score: 87.4261 bits (215), Expect = 1.937e-16
Identity = 79/253 (31.23%), Postives = 115/253 (45.45%), Query Frame = 0
Query:   75 GPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKAN-RLFNILTARHADEGTVPGGKQVRMVKAG-NPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQ 325
            GP +W   ++ C Q       G  QSPI++ A  +       A+ ++ + G +   L   G  T +    G+       LT+DG+ + L Q H H PSE+ V+G   P+EAH VH            N  V+AVF   GKAN  L N+L         VP   Q   ++A  +   L+P+ KDY+ + GSLTT         P  S       V+W V K  Q++SA QIA   +++ G        +NRP+Q
Sbjct:   30 GPEHWGEFASECAQ-------GKNQSPIDIHAATQAE----LAKLQLDYQG-KVVALTNNG-HTLQTSIEGENV-----LTIDGKAFALKQFHFHTPSENHVDGKSYPLEAHYVH-------ADEQGNLAVVAVFFEQGKANPALANLLE-------NVPERDQNVAIRAPFDANALIPRDKDYYRFNGSLTT---------PPCS-----EGVRWLVLKDPQSISAEQIAQF-EHVMG-------ENNRPVQ 228          
BLAST of EWM20525.1 vs. NCBI_GenBank
Match: gi|670463271|ref|WP_031412052.1| (carbonic anhydrase [Vibrio parahaemolyticus])

HSP 1 Score: 87.0409 bits (214), Expect = 2.229e-16
Identity = 80/259 (30.89%), Postives = 116/259 (44.79%), Query Frame = 0
Query:   69 GTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKAN-RLFNILTARHADEGTVPGGKQVRMVKAG-NPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQ 325
            G  E  GP +W   ++ C Q       G  QSPI++ +  +       A+ ++ + G +   L   G  T +    G+       LT+DG+ + L Q H H PSE+ V+G   P+EAH VH            N  V+AVF   GKAN  L N+L         VP   Q   ++A  +   L+P  KDY+ + GSLTT         P  S       V+W V K  Q++SA QIA   +++ G        +NRP+Q
Sbjct:   24 GYEESHGPEHWGEFASECAQ-------GKNQSPIDIHSATQAE----LAKLQLDYQG-KVVALTNNG-HTLQTSIEGENV-----LTIDGKAFALKQFHFHTPSENHVDGKSYPLEAHYVH-------ADEQGNLAVVAVFFEQGKANPALANLLE-------NVPERDQNVAIRAPFDANALIPSDKDYYRFNGSLTT---------PPCS-----EGVRWLVLKDPQSISAEQIAQF-EHVMG-------ENNRPVQ 228          
The following BLAST results are available for this feature:
BLAST of EWM20525.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100204|gb|EWM20525.1|0.000e+0100.00Carbonic anhydrase, alpha-class [Nannochloropsis g... [more]
gi|585100203|gb|EWM20524.1|0.000e+089.61Alpha carbonic anhydrase [Nannochloropsis gaditana... [more]
gi|585102601|gb|EWM22174.1|1.400e-3631.66carbonate dehydratase [Nannochloropsis gaditana][more]
gi|1048144189|ref|WP_065779277.1|4.525e-1731.23carbonic anhydrase [Vibrio parahaemolyticus] >gi|1... [more]
gi|1139888543|gb|ONI46444.1|4.788e-1732.78hypothetical protein AN641_00090 [Epulopiscium sp.... [more]
gi|1057573216|ref|WP_068865314.1|1.010e-1631.62carbonic anhydrase [Vibrio parahaemolyticus] >gi|1... [more]
gi|647078204|ref|WP_025638920.1|1.508e-1631.62carbonic anhydrase [Vibrio parahaemolyticus][more]
gi|1197237696|ref|WP_086484667.1|1.523e-1631.62carbonic anhydrase [Vibrio parahaemolyticus] >gi|1... [more]
gi|646741577|ref|WP_025577262.1|1.937e-1631.23carbonic anhydrase [Vibrio parahaemolyticus] >gi|1... [more]
gi|670463271|ref|WP_031412052.1|2.229e-1630.89carbonic anhydrase [Vibrio parahaemolyticus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10180rna10180Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications