EWM20531.1, cds10142 (CDS) Nannochloropsis gaditana

Overview
NameEWM20531.1
Unique Namecds10142
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:49352..49539 +
Alignment locationKK037264.1:49871..50188 +

Link to JBrowse

Properties
Property NameValue
End range.
End range50188
Protein idEWM20531.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100920g2.1616.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:49352..49539 +
KK037264.1supercontigKK037264.1:49871..50188 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20531.1 vs. NCBI_GenBank
Match: gi|585100215|gb|EWM20531.1| (hypothetical protein Naga_100920g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 340.117 bits (871), Expect = 3.653e-118
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 
Query:    1 MSTPRSNRHVETSDEQAEEECPSSVMIGMSNMAGVPADLASYVWDSREETGDTSNATETRSARKSGAKAPIVSPDLASSSAVAPATAGSSSSMGTAEGEGHKKKKKGPPRHHRPGRQPGARFALGVLTLINLLNYVDRWVVGQRGGGRTGRARGGDEREARSMEGGGGG 169
            MSTPRSNRHVETSDEQAEEECPSSVMIGMSNMAGVPADLASYVWDSREETGDTSNATETRSARKSGAKAPIVSPDLASSSAVAPATAGSSSSMGTAEGEGHKKKKKGPPRHHRPGRQPGARFALGVLTLINLLNYVDRWVVGQRGGGRTGRARGGDEREARSMEGGGGG
Sbjct:    1 MSTPRSNRHVETSDEQAEEECPSSVMIGMSNMAGVPADLASYVWDSREETGDTSNATETRSARKSGAKAPIVSPDLASSSAVAPATAGSSSSMGTAEGEGHKKKKKGPPRHHRPGRQPGARFALGVLTLINLLNYVDRWVVGQRGGGRTGRARGGDEREARSMEGGGGG 169
The following BLAST results are available for this feature:
BLAST of EWM20531.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100215|gb|EWM20531.1|3.653e-118100.00hypothetical protein Naga_100920g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10173rna10173Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications