EWM20533.1, cds10140 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|585100218|gb|EWM20533.1| (Peptidase C2, calpain, catalytic domain protein [Nannochloropsis gaditana]) HSP 1 Score: 305.449 bits (781), Expect = 3.119e-105 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 Query: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTGR 147 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTGR Sbjct: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTGR 147
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|1183427323|gb|ORY51621.1| (cysteine proteinase [Rhizoclosmatium globosum]) HSP 1 Score: 97.0561 bits (240), Expect = 1.249e-20 Identity = 62/150 (41.33%), Postives = 79/150 (52.67%), Query Frame = 0 Query: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKE--LKD-VAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTGR 147 + DLT FP E I F GFD E FW RL SFQ GF MGA CP S +GLVG HAYS+L V E ++D + +G+ + + +YF G +R + DD GV T+ G LRL++LRNPWG EW G+ Sbjct: 357 LFDLTGFPTESIPFGGIGFDSELFWTRLLSFQSQGFLMGAVCPQSGDGLVGGHAYSLLQVVEESIEDGLVIGKTKNLHDYF------------DAGVKR--KWDD---TQEFGV-------------TDHGTLRLIKLRNPWGKVEWKGK 476
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|145349968|ref|XP_001419397.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144579628|gb|ABO97690.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 89.7373 bits (221), Expect = 4.777e-18 Identity = 53/146 (36.30%), Postives = 68/146 (46.58%), Query Frame = 0 Query: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTG 146 +HDLT EMI F + FD E FW RL SF AGF +G + +S EG+VG HAYS+L V+E+ V G Q K+ E L P TE +LRL+++RNPWG +EW G Sbjct: 358 LHDLTGSATEMISFSSTYFDSEEFWVRLVSFSSAGFPLGCATSFSAEGIVGHHAYSILEVREMHGVKKGVQTKLPEV--------------------------------------LHGKKPAVETE--MLRLLKIRNPWGKKEWRG 463
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|1199291959|gb|OUS47049.1| (hypothetical protein BE221DRAFT_72852 [Ostreococcus tauri]) HSP 1 Score: 88.1965 bits (217), Expect = 1.589e-17 Identity = 55/146 (37.67%), Postives = 69/146 (47.26%), Query Frame = 0 Query: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTG 146 +HDLT E I F + FD E WARL SF AGF +G + +S EG+VG HAYSVL V+E+ V G Q K+ E +A RG+ A E LRL+++RNPWG REW G Sbjct: 366 LHDLTGSATEQIDFHANDFDSEECWARLMSFSAAGFPLGCATSFSAEGIVGHHAYSVLEVREVVGVKKGVQTKLTEVYA----------RGKDA----------------------------LDVEVENLRLLKIRNPWGKREWRG 473
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|308807110|ref|XP_003080866.1| (CG1391-PB, isoform B (ISS) [Ostreococcus tauri] >gi|116059327|emb|CAL55034.1| Peptidase C2, calpain family [Ostreococcus tauri]) HSP 1 Score: 88.1965 bits (217), Expect = 1.717e-17 Identity = 55/146 (37.67%), Postives = 69/146 (47.26%), Query Frame = 0 Query: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTG 146 +HDLT E I F + FD E WARL SF AGF +G + +S EG+VG HAYSVL V+E+ V G Q K+ E +A RG+ A E LRL+++RNPWG REW G Sbjct: 366 LHDLTGSATEQIDFHANDFDSEECWARLMSFSAAGFPLGCATSFSAEGIVGHHAYSVLEVREVVGVKKGVQTKLTEVYA----------RGKDA----------------------------LDVEVENLRLLKIRNPWGKREWRG 473
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|219116891|ref|XP_002179240.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409131|gb|EEC49063.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 86.2705 bits (212), Expect = 7.934e-17 Identity = 55/146 (37.67%), Postives = 72/146 (49.32%), Query Frame = 0 Query: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTG 146 + DLT P E I F +D D + WARL SF +AGF +G + EGLVG HAYS+L V E+ + +G+Q+KV +YF+ S R G P+ P +RLVR+RNPWG REW G Sbjct: 464 LTDLTGAPTETIIF-SDLIDLDELWARLLSFHQAGFLVGVATSRGGEGLVGGHAYSLLDVIEINNSLIGEQKKVTDYFSSPS----------KKHRKLTG-------------PNYDTCAP--------IRLVRIRNPWGKREWKG 577
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|255075503|ref|XP_002501426.1| (predicted protein [Micromonas commoda] >gi|226516690|gb|ACO62684.1| predicted protein [Micromonas commoda]) HSP 1 Score: 82.0333 bits (201), Expect = 2.368e-15 Identity = 52/150 (34.67%), Postives = 70/150 (46.67%), Query Frame = 0 Query: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASC----PYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTG 146 + DLT P E I+ D GF E W +L S+ A F MG + + + GLVG HAYSV+ V+EL +VG+Q K+ + A V V + G G PP LRL+R+RNPWG +EW+G Sbjct: 410 LLDLTGCPTETIRLDASGFKSEEAWRKLLSYAAAKFPMGCATQGDPSHREVGLVGNHAYSVMEVRELHGASVGRQTKLTSFVAKERVEDVDAAAGGGG----------------------PP-----------LRLLRIRNPWGRKEWSG 526
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|1210527406|dbj|GAX14041.1| (calpain-15 [Fistulifera solaris]) HSP 1 Score: 76.2554 bits (186), Expect = 2.349e-13 Identity = 48/146 (32.88%), Postives = 65/146 (44.52%), Query Frame = 0 Query: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTG 146 + DLT P E F + W L ++Q GF MG + +GL+G HAYS+L V +L D+ VG Q KV +YF G+N + V +P + +RLVR+RNPWG REW G Sbjct: 451 LQDLTGAPTETHLL----FAADHLWPILMTYQREGFLMGVATARGGDGLIGGHAYSILDVIQLDDMIVGDQPKVTDYF-------------------------GQNSQKSVKVPE----------KRQTIRLVRIRNPWGKREWKG 557
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|1210523710|dbj|GAX17392.1| (calpain-15 [Fistulifera solaris]) HSP 1 Score: 75.8702 bits (185), Expect = 3.172e-13 Identity = 49/146 (33.56%), Postives = 62/146 (42.47%), Query Frame = 0 Query: 1 MHDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTG 146 + DLT P E F E W L ++Q GF MG + +GLVG HAYS+L V +L D+ VG Q KV +YF+ SV L + +RLVR+RNPWG REW G Sbjct: 456 LQDLTGAPTETHLL----FAAEHLWPILMTYQREGFLMGVATARGGDGLVGGHAYSILDVIQLDDMIVGDQSKVTDYFSQNPQKSV-----------------------------------KVLEQRQTIRLVRIRNPWGKREWKG 562
BLAST of EWM20533.1 vs. NCBI_GenBank
Match: gi|303279130|ref|XP_003058858.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226460018|gb|EEH57313.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 71.633 bits (174), Expect = 9.543e-12 Identity = 54/145 (37.24%), Postives = 69/145 (47.59%), Query Frame = 0 Query: 2 HDLTSFPCEMIQFDTDGFDREAFWARLCSFQEAGFTMGASCPYSQEGLVGCHAYSVLCVKELKDVAVGQQRKVLEYFAPRSVASVVSTRGRGAQRAGEGDDGGKNDRAGVHLPSLPPSPPPFLTEDGVLRLVRLRNPWGCREWTG 146 H + P + + FD W ++ S+ EAGF MG + GLVG HAYSVL V++L VAVG+Q K L+ F R V V A + A + SPPP LRLVR+RNPWG +EW G Sbjct: 444 HSSPALPFQRLTGGGGAFDEARAWEKVLSYCEAGFPMGCATSSGGRGLVGGHAYSVLDVRQLHGVAVGRQTK-LDGFVEREVEIV--------DPAPALVSASASKYASSAAAADASSPPP-------LRLVRVRNPWGRKEWNG 572 The following BLAST results are available for this feature:
BLAST of EWM20533.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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