EWM20544.1, cds10129 (CDS) Nannochloropsis gaditana

Overview
NameEWM20544.1
Unique Namecds10129
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:21988..21996 +
Alignment locationKK037264.1:22187..22381 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20544.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101390g2.2419.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:21988..21996 +
KK037264.1supercontigKK037264.1:22187..22381 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20544.1 vs. NCBI_GenBank
Match: gi|585100237|gb|EWM20544.1| (hypothetical protein Naga_101390g2 [Nannochloropsis gaditana])

HSP 1 Score: 139.428 bits (350), Expect = 4.624e-42
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 MDIEGGGRLKASNDDARAHLEGKSMKGGMNSSKLCDERLVPISRQFVALDNRGRCRQWSTMVKRSFF 67
            MDIEGGGRLKASNDDARAHLEGKSMKGGMNSSKLCDERLVPISRQFVALDNRGRCRQWSTMVKRSFF
Sbjct:    1 MDIEGGGRLKASNDDARAHLEGKSMKGGMNSSKLCDERLVPISRQFVALDNRGRCRQWSTMVKRSFF 67
The following BLAST results are available for this feature:
BLAST of EWM20544.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100237|gb|EWM20544.1|4.624e-42100.00hypothetical protein Naga_101390g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10160rna10160Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications