EWM20546.1, cds10127 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20546.1 vs. NCBI_GenBank
Match: gi|585100240|gb|EWM20546.1| (hypothetical protein Naga_100685g1 [Nannochloropsis gaditana]) HSP 1 Score: 2127.44 bits (5511), Expect = 0.000e+0 Identity = 1062/1062 (100.00%), Postives = 1062/1062 (100.00%), Query Frame = 0
Query: 1 MRYSRFFTPYVGRFFGHTSKRKSSLWIYLASGTRTAHLTLEERQKVTPASLPRPGDHPPFIDPTILNVCPNLHAENPPRGVKTRIQAPGAGGKGRGRPTEAGRGGGRAGRPTAEPEGGSEAAKEGKNREEDATGGDGVWMSPPASDQARNIAGACVGPRFHQEEASIRGKTILGRDMEPSRSTKEPRRGDIEAVKRGEEAKKGPSEAGHPGGGRGVAGRGGAMGAREDIRLGETASGSAEGGRTHQGCNEEDFWMPERHGGGDSERSALLPSPHASPPLPPPPSSVTRTFSSGSTSSNNSTDPSYNLSHPSPPPALAPLPSSFPPSPGTSPSVMTMWEMLASAFQSAYAQGHIERERVIQTLRVWTVEQYITGYDHTWGVAGYILKILKITDEELNRAALSTMAEAHKILEQRPSTDGSGSIDLRSLPTFRVLDDGETPLLLMRFKGQRLTTVVNAAFESSFFTSAEIEAQRKAASMILEFVLAKAVAVEDRLAFFETLARSVFGGESNVSQLLKFQKRNGRSVVSLFRLRGVYVEEIRAGVGVITVAALPSPLKYPFIEEESPRQLSQRPPHGKEARGQGRGTLAGRDEGGRERGREGKRKRAPSTATAFLASSTPVGVLGLEKKTKETEQGGGKEGGDKSKGREGGHMHKDPSTASSFPPSDPEGPPGNLPATLRPRDIRRKRETTHDPSLHAASTSFAPFSPPAPVERGGTFRAGREAKEEKEEETIPFYRPLPLKRPSSSSSAASSSYTSSSSSSYVSTSSSSHSSPSASSSTIHVGQPSSNSGGIATREEEKECEDKEPQGKSRPPASAASDYQTFPAPSSLPPSLPPFFPPSFPRRRRPSGDYLRPDEEEGEGRKQREALEVPSQARNPAPHEKALTPVEASMLFLQQELQDTRGGQQQGQEQEQGLRDMREPQGYRQGQELHPRQQFVPKQEPLGQEEPPRPFPHRDYEAQQQQQQQQQQRQQTQEKPPPHAPQPPQQHLQSQPPQQQQPPPPPPPPPQHQQQQEQQHLSDRQPQPSKQPQPQLQQETHHYQQLQPWRPQRSHSQGQELPGWEAA 1062
MRYSRFFTPYVGRFFGHTSKRKSSLWIYLASGTRTAHLTLEERQKVTPASLPRPGDHPPFIDPTILNVCPNLHAENPPRGVKTRIQAPGAGGKGRGRPTEAGRGGGRAGRPTAEPEGGSEAAKEGKNREEDATGGDGVWMSPPASDQARNIAGACVGPRFHQEEASIRGKTILGRDMEPSRSTKEPRRGDIEAVKRGEEAKKGPSEAGHPGGGRGVAGRGGAMGAREDIRLGETASGSAEGGRTHQGCNEEDFWMPERHGGGDSERSALLPSPHASPPLPPPPSSVTRTFSSGSTSSNNSTDPSYNLSHPSPPPALAPLPSSFPPSPGTSPSVMTMWEMLASAFQSAYAQGHIERERVIQTLRVWTVEQYITGYDHTWGVAGYILKILKITDEELNRAALSTMAEAHKILEQRPSTDGSGSIDLRSLPTFRVLDDGETPLLLMRFKGQRLTTVVNAAFESSFFTSAEIEAQRKAASMILEFVLAKAVAVEDRLAFFETLARSVFGGESNVSQLLKFQKRNGRSVVSLFRLRGVYVEEIRAGVGVITVAALPSPLKYPFIEEESPRQLSQRPPHGKEARGQGRGTLAGRDEGGRERGREGKRKRAPSTATAFLASSTPVGVLGLEKKTKETEQGGGKEGGDKSKGREGGHMHKDPSTASSFPPSDPEGPPGNLPATLRPRDIRRKRETTHDPSLHAASTSFAPFSPPAPVERGGTFRAGREAKEEKEEETIPFYRPLPLKRPSSSSSAASSSYTSSSSSSYVSTSSSSHSSPSASSSTIHVGQPSSNSGGIATREEEKECEDKEPQGKSRPPASAASDYQTFPAPSSLPPSLPPFFPPSFPRRRRPSGDYLRPDEEEGEGRKQREALEVPSQARNPAPHEKALTPVEASMLFLQQELQDTRGGQQQGQEQEQGLRDMREPQGYRQGQELHPRQQFVPKQEPLGQEEPPRPFPHRDYEAQQQQQQQQQQRQQTQEKPPPHAPQPPQQHLQSQPPQQQQPPPPPPPPPQHQQQQEQQHLSDRQPQPSKQPQPQLQQETHHYQQLQPWRPQRSHSQGQELPGWEAA
Sbjct: 1 MRYSRFFTPYVGRFFGHTSKRKSSLWIYLASGTRTAHLTLEERQKVTPASLPRPGDHPPFIDPTILNVCPNLHAENPPRGVKTRIQAPGAGGKGRGRPTEAGRGGGRAGRPTAEPEGGSEAAKEGKNREEDATGGDGVWMSPPASDQARNIAGACVGPRFHQEEASIRGKTILGRDMEPSRSTKEPRRGDIEAVKRGEEAKKGPSEAGHPGGGRGVAGRGGAMGAREDIRLGETASGSAEGGRTHQGCNEEDFWMPERHGGGDSERSALLPSPHASPPLPPPPSSVTRTFSSGSTSSNNSTDPSYNLSHPSPPPALAPLPSSFPPSPGTSPSVMTMWEMLASAFQSAYAQGHIERERVIQTLRVWTVEQYITGYDHTWGVAGYILKILKITDEELNRAALSTMAEAHKILEQRPSTDGSGSIDLRSLPTFRVLDDGETPLLLMRFKGQRLTTVVNAAFESSFFTSAEIEAQRKAASMILEFVLAKAVAVEDRLAFFETLARSVFGGESNVSQLLKFQKRNGRSVVSLFRLRGVYVEEIRAGVGVITVAALPSPLKYPFIEEESPRQLSQRPPHGKEARGQGRGTLAGRDEGGRERGREGKRKRAPSTATAFLASSTPVGVLGLEKKTKETEQGGGKEGGDKSKGREGGHMHKDPSTASSFPPSDPEGPPGNLPATLRPRDIRRKRETTHDPSLHAASTSFAPFSPPAPVERGGTFRAGREAKEEKEEETIPFYRPLPLKRPSSSSSAASSSYTSSSSSSYVSTSSSSHSSPSASSSTIHVGQPSSNSGGIATREEEKECEDKEPQGKSRPPASAASDYQTFPAPSSLPPSLPPFFPPSFPRRRRPSGDYLRPDEEEGEGRKQREALEVPSQARNPAPHEKALTPVEASMLFLQQELQDTRGGQQQGQEQEQGLRDMREPQGYRQGQELHPRQQFVPKQEPLGQEEPPRPFPHRDYEAQQQQQQQQQQRQQTQEKPPPHAPQPPQQHLQSQPPQQQQPPPPPPPPPQHQQQQEQQHLSDRQPQPSKQPQPQLQQETHHYQQLQPWRPQRSHSQGQELPGWEAA 1062
BLAST of EWM20546.1 vs. NCBI_GenBank
Match: gi|553190527|ref|XP_005855209.1| (hypothetical protein NGA_0073500, partial [Nannochloropsis gaditana CCMP526] >gi|422293855|gb|EKU21155.1| hypothetical protein NGA_0073500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 113.235 bits (282), Expect = 1.498e-26 Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
Query: 140 MSPPASDQARNIAGACVGPRFHQEEASIRGKTILGRDMEPSRSTKEPRRGDIEA 193
MSPPASDQARNIAGACVGPRFHQEEASIRGKTILGRDMEPSRSTKEPRRGDIEA
Sbjct: 1 MSPPASDQARNIAGACVGPRFHQEEASIRGKTILGRDMEPSRSTKEPRRGDIEA 54 The following BLAST results are available for this feature:
BLAST of EWM20546.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|